mRNA_Ecto-sp13_S_contig6752.17671.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6752.17671.1
Unique NamemRNA_Ecto-sp13_S_contig6752.17671.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A6H5JMA5_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA5_9PHAE)

HSP 1 Score: 748 bits (1931), Expect = 1.640e-253
Identity = 414/502 (82.47%), Postives = 418/502 (83.27%), Query Frame = 1
Query:   10 RNARLNEYFAVVGLHDGPLLFSDPLPNESPPS--PGRSSTVPAPPADKKKNGDGAVFGDHAGREVNSGGSRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTASTVGLNSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLAEGVPQQGGTAESAPPPTPFVRPNLVKRRTYGSCELGKIQARPGGMSGPLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAEGGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYVVQV 1509
            RNARLNEYFAVVGLHDGPLL SDPLPNESPPS  PGRSSTVP    DKKKNG GAVFGDH    VN       XXXXXXXXXXXXXXXXXXXXXXXX   X            NGTASTVG NS                           GRLAEGVPQQGGT ESAPPPTPFVRPNLVKRRTYGSCELGKIQARPGGMSGPLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHE           GL+DAHNKA SRA GG  NATE LATLDP REVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNT ITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTL++CLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVH +FVEGT MDVAP VVQV
Sbjct:   16 RNARLNEYFAVVGLHDGPLLLSDPLPNESPPSLSPGRSSTVPPXXXDKKKNGHGAVFGDHTEGGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGXSSLGKGNDTTKSNGTASTVGSNSDGGRSDSNSTDRETTTKTT--------GRLAEGVPQQGGTTESAPPPTPFVRPNLVKRRTYGSCELGKIQARPGGMSGPLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHE-----------GLVDAHNKAASRAVGGETNATEPLATLDPEREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTIITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLVSCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHRSFVEGTGMDVAPDVVQV 498          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: D7FMH7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH7_ECTSI)

HSP 1 Score: 597 bits (1538), Expect = 1.120e-198
Identity = 287/303 (94.72%), Postives = 293/303 (96.70%), Query Frame = 1
Query:  601 MSGPLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAEGGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYVVQV 1509
            MSGPLHTRFRARVLHRFPGYDHEGNGCAFP NLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGL+DAHNKA SRAEGG ++ATE L TLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIV LLTCLLLERSI+LKSSQLSLLTPCAE   VL+LVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVH +FVEGTDMDVAPYVVQV
Sbjct:    1 MSGPLHTRFRARVLHRFPGYDHEGNGCAFPTNLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLVDAHNKAASRAEGGENDATEPLTTLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVILLTCLLLERSIVLKSSQLSLLTPCAE---VLSLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHRSFVEGTDMDVAPYVVQV 300          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A835ZGT0_9STRA (UDENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGT0_9STRA)

HSP 1 Score: 338 bits (866), Expect = 3.890e-99
Identity = 175/316 (55.38%), Postives = 212/316 (67.09%), Query Frame = 1
Query:  556 YGSCELGKIQARPGGMSGPLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAEGGGDNATETLAT------LDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMD 1485
            Y +CE  ++       + P  T++ A+VLHRFP  DH+ N   FP+NL LFCLP GLKL  +  +PTFFTFVHTRANGQHMFG+CL  HE L    R+ELQ   DA        EG     TETL        L P   ++ PKCLCLLS+WP+F  +REWL NL+ ISLSP  IPLERY+ NF+LEVP   PGR EV Y MG   +TFACPPPNKP+AW ++PFE LFQCL  EN+  +   +LLER ILL+SSQL LLT  AE   VLT +LYPL W+HVYIPVLPE L+GVL APMPF++GVH ++     +D
Sbjct:   42 YSACEDHELDP----TTHPSRTKYVAQVLHRFPLSDHDDN--PFPSNLALFCLPEGLKLGRKEEIPTFFTFVHTRANGQHMFGFCLTFHERLDEETRLELQEACDAW-------EGLYRGDTETLGVDTSCPPLGPEEALFTPKCLCLLSSWPFFTSYREWLTNLFLISLSPSDIPLERYICNFMLEVPNAVPGRTEVRYRMGANDLTFACPPPNKPIAWRALPFETLFQCLDDENVAAVFEAVLLERCILLRSSQLFLLTAAAE---VLTTLLYPLCWTHVYIPVLPEPLMGVLGAPMPFIVGVHVDWAGERGLD 341          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A7S1TYQ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYQ9_9STRA)

HSP 1 Score: 265 bits (676), Expect = 8.360e-74
Identity = 150/351 (42.74%), Postives = 197/351 (56.13%), Query Frame = 1
Query:  610 PLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRA------------------EGGG-------------DNATE--TLATLDP-------------------------------GREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVE 1470
            PL  R+   +L RFP  DHE     FP  +PLFC+P GL+L  +M +PTF TFVHT   GQH++G+CL ++EPL   HR++LQ LL   +KA  +A                  EG G             D   E  T A  +P                               G EV APKCL +LS WP+   +REWL  LYR+SLSP  +PLE Y+G+F  EVP P PGR  V   + + TI+F  PP N P++W ++P+ PLF+CL   +I+ L TCLLLE+ ++L SSQ  LL+  +EA   +T +L+PL WSHVYIP+LP  L GVL APMPFLIG+HT+ +E
Sbjct:   40 PLEARYMMALLDRFPRRDHEDT--PFPTGVPLFCMPCGLRLETKMRMPTFSTFVHTDGAGQHLYGHCLTIYEPLTPEHRVQLQALLTKAHKARRQARSHSPPALAAGEAAGQDDEGEGAANQEGNPMASPPDELKELQTEAEAEPVAAAGEEEXXXXXXXXXXXXXXXXXEPPSLDGVEVLAPKCLVVLSYWPHHLSYREWLKQLYRVSLSPTPVPLEAYIGSFCHEVPLPPPGRTLVQVAIADQTISFHTPPENAPMSWSALPYAPLFECLRPADIICLFTCLLLEKHVVLISSQQFLLSTASEA---VTSLLFPLRWSHVYIPILPAPLFGVLHAPMPFLIGMHTDAIE 385          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A7S2RHS4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RHS4_9STRA)

HSP 1 Score: 221 bits (564), Expect = 3.850e-59
Identity = 120/291 (41.24%), Postives = 167/291 (57.39%), Query Frame = 1
Query:  604 SGPLHTRFRA-RVLHRFPGYDHEGNGCAFPANLPLFCLP-GGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAEGGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVE 1470
            SG +     A +VL RFP  DH+     FP+ +P+FC   GG  L   M +P FF FV T   G H++GY L ++EPL      E    L+                          +  Y PKCLC+LS WP+   +R +L  LYR+S+SP  +PLER + NF+ EVP P PG+V +L+N+G+  + F  PP N P++W  + F+ +F+ L   NI+ + + LL ER IL++SSQ SLLT   E   V+  +LYP  WSHVYIP+LP+A+L VL AP+PF+IGVH   +E
Sbjct:   35 SGSIQDELYAVQVLDRFPVVDHKD--VDFPSGVPVFCFADGGASLVDRMEMPVFFEFVTTGGCGGHLYGYALTIYEPLAEHMYCEEWNRLN--------------------------KRFYVPKCLCILSHWPFRSQYRTFLTQLYRLSISPVTVPLERIISNFVCEVPVPPPGKVRILHNIGDAELVFTRPPVNNPISWTDLGFQQVFEALDLHNILRVFSALLTERQILVRSSQRSLLTTFGE---VMRALLYPFCWSHVYIPLLPKAMLMVLQAPLPFMIGVHEPILE 294          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A482T435_9ARCH (UDENN domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T435_9ARCH)

HSP 1 Score: 214 bits (544), Expect = 4.660e-59
Identity = 124/311 (39.87%), Postives = 170/311 (54.66%), Query Frame = 1
Query:  613 LHTRFRARVLHRFPGYDHE-GNGCA-------FPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDA--HNKAVSRAEGGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRI--SLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYVVQV 1509
            L T F A VL R+P  DH   +G A        P  +  FC P GL  S   + P F  FVHT  +G  M G CL   E L T     +  +  +  HN+     E G D+            ++Y  K +C+LS WP+  PF+++L+ LY +  S    +IP+ERY+ NF+ ++P P  G+V+++Y + +  I F CPP N P  W   P  PLF CLS  NI+ L +C+L ER +LL SSQ SLLT CAE+ + L   LYPL+WSH YIP+LP  LLGVL AP PFL+G+ +   E     V+   ++V
Sbjct:   60 LQTAFEASVLSRYPTTDHPFSSGPASLSYASRLPEGIEFFCFPQGLLFSTTPSFPKFHAFVHTSEDGSRMIGTCLYFSEELSTEEYDIVNKINSSMHHNELSGLMEFGTDST-----------KLYVLKGICILSYWPFIEPFKKFLMILYNMLGSDKANKIPIERYICNFIDDIPAPPAGKVDIVYYLNDDIIRFRCPPLNVPSTWLGFPLLPLFHCLSLHNILLLFSCVLTERQVLLISSQYSLLTICAESIMSL---LYPLTWSHAYIPILPSRLLGVLGAPFPFLLGLPSAIYEANKSCVSNETIRV 356          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A7S1G5V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5V3_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.990e-57
Identity = 135/338 (39.94%), Postives = 185/338 (54.73%), Query Frame = 1
Query:  610 PLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPL-------------GTRHRIE-------------LQGLLDAHNKAVSRAE-----------GGGDNATETLATLDPG-REVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYVVQV 1509
            PL   +R  +  RFP  D E     FP N+ LFC P GL+L     LP FF FV T   G H++G+ L   E L              TR R+               +G++   ++  S A            GGGD A +     D    E+YAP CL ++S W + G FRE+L  LY +SLSP  +P+ER V NF+ EV  P  G+V V Y + +TT++F  PP N+ ++   +PF  +F+CLS +NI+ L+TC+L ER ILL SSQLSLL+  A    VL+ V+YPL W HVYIPVLP+ L+ VL APMP++ G+ T   E   ++V  ++VQV
Sbjct:   94 PLDLCYRGLIRDRFPEADFE---LPFPTNVALFCFPAGLQLYTRPPLPFFFMFVGTGGEGAHIYGHVLTFFEKLTPTQCDSLRRMGCATRRRVGGRRRPRFKGDPHGAEGVVPRRDRRDSDAVPLPTVGEDEDGGGGDGAADEGEWEDVVFEELYAPACLIVVSQWAFSG-FREFLTKLYNLSLSPQPVPIERVVCNFMQEVVLPPAGQVIVDYTIADTTLSFQRPPVNQRISAQDIPFREVFECLSIDNILKLVTCVLTERQILLHSSQLSLLSATAT---VLSAVIYPLRWVHVYIPVLPKGLVQVLHAPMPYICGLPTEIFE--SVEVPEHIVQV 422          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A4D9DDS2_9STRA (UDENN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDS2_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.280e-55
Identity = 130/323 (40.25%), Postives = 179/323 (55.42%), Query Frame = 1
Query:  610 PLHTRFRARVLHRFPGYDHEG----NGCAFPANLPLFCLPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRH-------------RIELQGLLDAHNKAVSRAEGGGDNA--------------------TETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAW-GSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLA-APMPFLIGVHTN 1461
            PL  R++  ++ RFP  D++     NG A       FC P GL+L+  M  P FFTFV T   G   +G+ L +HE L                 R E  G  +    +  + E G   A                    T  LAT   G  V+APKCLCLLS +P+    R WLL LYR+S SP +IPLERY+ NFLLEVPTP PGRV+V Y+M +  + + CP P++P  W G +  E +F+CLS +N++ +   +LLE+ +LL S+QLSLLT  AE    LT  ++PL++SHV+IP+LP   L + A +P+PFL+G HT+
Sbjct:   42 PLCLRYQPYLIDRFPVEDNQETKVENGVAD------FCFPTGLRLAECMQAPKFFTFVLTNGEGDRSYGHTLVIHEALPESTEALLSRRIAEWEIRKEENGDGEGRRLSTLKREAGRTGAFFAEVKDAVCEEEKVAMQSPTPDLATRPRGGRVFAPKCLCLLSKYPFVEASRTWLLQLYRLSCSPTRIPLERYICNFLLEVPTPVPGRVDVQYSMLDLVLYYPCPSPHQPALWSGGLSLEAVFECLSPKNLLRVFNAVLLEQQVLLHSTQLSLLTAVAEF---LTACMWPLAYSHVFIPILPRQCLYLCANSPVPFLLGCHTD 355          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A448Z484_9STRA (UDENN domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z484_9STRA)

HSP 1 Score: 209 bits (533), Expect = 5.190e-55
Identity = 122/300 (40.67%), Postives = 170/300 (56.67%), Query Frame = 1
Query:  616 HTRFRARVLHRFPGYDHEGNGCAFPANLPLFC-LPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAEGGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLSP-FQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYVVQV 1509
            H  F+  V  R+P YDHE N   F AN+  FC   G ++L     +P F  FV T   G+ M+G CL L EP   + R               + +G   N  E   TLD    V+ PKC+ LLST+PY   FRE+L  L R+S +    +P+ERY+ N  LE+P P PG  EV   + ++ I    PP N+P+AW S+PF  LFQCL  +NI+ +  CL+LER +LL S+QLS+LT C+E   +L  +L+P+ WSH YIP+LP+ L+ +L+APMPF  G+    +     D++P  V V
Sbjct:   84 HEGFKPIVTARYPQYDHEDN--PFDANVCYFCHTSGAIQLKKNPYMPKFHYFVATGGTGKKMYGTCLTLWEPAQIKGR---------------KKKGKNSNQEEPTETLD----VFLPKCVVLLSTYPYLMAFREYLTQLNRMSKTEEMTLPIERYITNVCLEIPAPPPGSFEVQTTILDSIIKIWSPPHNQPIAWVSLPFSHLFQCLDIDNIILVWHCLVLERQVLLTSTQLSVLTTCSE---ILLSLLFPMRWSHAYIPLLPKFLIPILSAPMPFFCGIDKASLAEALYDLSPECVVV 359          
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Match: A0A6U9YS96_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9YS96_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.500e-53
Identity = 120/300 (40.00%), Postives = 169/300 (56.33%), Query Frame = 1
Query:  616 HTRFRARVLHRFPGYDHEGNGCAFPANLPLFC-LPGGLKLSLEMTLPTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAEGGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRIS-LSPFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWGSVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLTLVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYVVQV 1509
            H  F+  V  R+P YDHE N   F  N+  FC + G ++L     +P    FV T   G+ M+G CL L EP   + R +             RA+   D   E   TLD    V+ PKC+ LLST+PY   FRE+L  L R+S +    +P+ERY+ N  LE+P P PG  EV   + ++ I    PP N+P+AW S+PF  LFQCL  +NI+ +   L+LER +LL S+QLS+LT C+E   +L  +L+P+ WSH YIP+LP+ L+ +L+APMPF  G+    +     D++P  V V
Sbjct:  113 HEGFKPIVTSRYPHYDHEDN--PFDPNVCYFCHISGAIQLKKNPYMPKIHYFVATGGTGKKMYGTCLTLWEPARIKGRKK-------------RAKNSDDERGEPTNTLD----VFLPKCVVLLSTYPYLMAFREYLAQLNRMSKMGEMTLPIERYITNICLEIPAPPPGSFEVQTTILDSIIKIWSPPHNQPIAWVSLPFSHLFQCLDIDNIILVWHSLVLERQVLLTSTQLSVLTTCSE---ILLSLLFPMRWSHAYIPLLPKFLIPILSAPMPFFCGIDKASLAEALYDLSPECVVV 390          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6752.17671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMA5_9PHAE1.640e-25382.47UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FMH7_ECTSI1.120e-19894.72UDENN domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZGT0_9STRA3.890e-9955.38UDENN domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S1TYQ9_9STRA8.360e-7442.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RHS4_9STRA3.850e-5941.24Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A482T435_9ARCH4.660e-5939.87UDENN domain-containing protein n=1 Tax=archaeon T... [more]
A0A7S1G5V3_9STRA1.990e-5739.94Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A4D9DDS2_9STRA1.280e-5540.25UDENN domain-containing protein n=2 Tax=Monodopsid... [more]
A0A448Z484_9STRA5.190e-5540.67UDENN domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A6U9YS96_9STRA1.500e-5340.00Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6752contigEcto-sp13_S_contig6752:1306..5630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score599.7
Seed ortholog evalue1.2e-168
Seed eggNOG ortholog2880.D7FMH7
Model size1533
KEGG koko:K20163
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Rab guanyl-nucleotide exchange factor activity
EggNOG OGsKOG2127@1,KOG2127@2759
Ec32 ortholog descriptiondDENN domain
Ec32 orthologEc-23_000340.1
Cds size1533
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6752.17671.1prot_Ecto-sp13_S_contig6752.17671.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6752 1306..5630 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463928.3934379-CDS-Ecto-sp13_S_contig6752:1305..14971681463928.3934379-CDS-Ecto-sp13_S_contig6752:1305..1497Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6752 1306..1497 -
1681463928.4085343-CDS-Ecto-sp13_S_contig6752:2204..22651681463928.4085343-CDS-Ecto-sp13_S_contig6752:2204..2265Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6752 2205..2265 -
1681463928.4276037-CDS-Ecto-sp13_S_contig6752:2592..27441681463928.4276037-CDS-Ecto-sp13_S_contig6752:2592..2744Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6752 2593..2744 -
1681463928.4435947-CDS-Ecto-sp13_S_contig6752:3313..35111681463928.4435947-CDS-Ecto-sp13_S_contig6752:3313..3511Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6752 3314..3511 -
1681463928.4545202-CDS-Ecto-sp13_S_contig6752:3997..41021681463928.4545202-CDS-Ecto-sp13_S_contig6752:3997..4102Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6752 3998..4102 -
1681463928.4673796-CDS-Ecto-sp13_S_contig6752:4805..56301681463928.4673796-CDS-Ecto-sp13_S_contig6752:4805..5630Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6752 4806..5630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6752.17671.1

>prot_Ecto-sp13_S_contig6752.17671.1 ID=prot_Ecto-sp13_S_contig6752.17671.1|Name=mRNA_Ecto-sp13_S_contig6752.17671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=511bp
HSERNARLNEYFAVVGLHDGPLLFSDPLPNESPPSPGRSSTVPAPPADKK
KNGDGAVFGDHAGREVNSGGSRVAAAAAAAAAAAAAAAAATPAMKGGGIG
GGSSLDKSTDTTKSNGTASTVGLNSHGGSSSSSDGGSSDSNSTDSETTTT
TTGRLAEGVPQQGGTAESAPPPTPFVRPNLVKRRTYGSCELGKIQARPGG
MSGPLHTRFRARVLHRFPGYDHEGNGCAFPANLPLFCLPGGLKLSLEMTL
PTFFTFVHTRANGQHMFGYCLCLHEPLGTRHRIELQGLLDAHNKAVSRAE
GGGDNATETLATLDPGREVYAPKCLCLLSTWPYFGPFREWLLNLYRISLS
PFQIPLERYVGNFLLEVPTPSPGRVEVLYNMGNTTITFACPPPNKPVAWG
SVPFEPLFQCLSHENIVTLLTCLLLERSILLKSSQLSLLTPCAEASIVLT
LVLYPLSWSHVYIPVLPEALLGVLAAPMPFLIGVHTNFVEGTDMDVAPYV
VQVRKRGRCC*
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mRNA from alignment at Ecto-sp13_S_contig6752:1306..5630-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6752.17671.1 ID=mRNA_Ecto-sp13_S_contig6752.17671.1|Name=mRNA_Ecto-sp13_S_contig6752.17671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4325bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6752:1306..5630- (Ectocarpus species13 EcNAP12_S_4_19m)
CATTCCGAAAGAAACGCTCGGCTGAACGAGTACTTCGCGGTAGTGGGACT ACACGACGGGCCGCTGCTGTTTTCCGACCCTCTTCCAAACGAGTCTCCCC CCTCGCCGGGGAGAAGCTCAACGGTACCAGCACCACCAGCAGACAAGAAG AAGAACGGGGATGGGGCTGTTTTCGGGGACCATGCGGGGAGAGAGGTGAA CTCGGGGGGCTCAAGAGTCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCCGCTGCGACGCCGGCGATGAAGGGCGGAGGGATCGGC GGTGGAAGTAGCCTCGACAAGAGCACCGACACAACAAAGAGCAACGGCAC GGCCTCGACCGTAGGGTTAAACAGCCACGGCGGCAGCAGCAGCAGCAGCG ACGGCGGCAGCAGCGACAGCAACAGCACCGACAGTGAAACAACAACTACG ACAACGGGGCGGCTGGCGGAAGGCGTCCCGCAGCAGGGGGGCACCGCAGA GTCTGCGCCGCCCCCCACCCCCTTCGTGCGGCCAAACCTTGTCAAGCGAC GGACGTACGGTAGCTGCGAGCTTGGAAAGATTCAGGCTCGGCCCGGGGGG ATGAGCGGGCCCCTTCACACAAGGTTTCGGGCGAGGGTGCTGCACAGGTT TCCCGGGTACGACCACGAGGGGAACGGGTGCGCCTTTCCGGCTAACCTGC CGCTGTTCTGCCTGCCCGGCGGGCTCAAGCTGAGCCTGGAGATGACCCTG CCCACATTCTTCACCTTCGTCCACACGAGGGCTAACGGCCAGCACATGTT CGGGTACTGCCTCTGTCTGCACGAGGTGACGAGAAGTTTTGTTTGCCCTC CCCCCCACCCGCGGATGGTGACCGGTTTTTTTATTCATCCTTGTGAAACT TAGCCTGGGCCGGCACACATATCGCTCCTTTGTCCCGGCGTTGTAGCGGT GCGAGGTCAAAAGTCTACCGACTACGGCATGCGTTTACATGAGTACACAT ACACACCACACACCCATGCATATATTTTTTTATTTTTTTCTGAAGAACCC GTGCAAGCGGCGTATTCGAGGAAGGATCAACGCATCAAAACATCAAACGG TATCCGTTGTCTTGTCTGCTGAGATGGATGTGGTGTTTGCAGTGGTGTCC TCTCTATGGAGGTATCAAAACGTCGGAGCAGAGCTGGGACGATTGATCAA CTTTGGTGTCCACCCCAAAGCACTGTTGCAAGATGCCCAAAGATAGTGAG TCGGTACTCTCGTCCTACATAAATACTACCCTCTTGCTCTTTGCACACGT GCCGGGCTCACTTTGTATTCAAAACATGGAATATGGTGGTCGTTGCCGCT GCAAGTTCTTCGTAGATGTGCCATTCACAAAAGAAGAGAAAGAAGAACAG GTCGTCGGACCTCCTCTCTCCAACATCCAGGCTAGCACTGCTGGAAATGA CTGCCCGTGAGTCAACCACCCCCCTCATTTCTCGCCGTGCACTCAATTCC CTCCCGTGCCAACCTAAACCTATTTCAGCCGTTGGGAACGCGACATCGGA TAGAACTGCAGGGGCTGCTGGACGCCCACAACAAGGCGGTTTCGCGGGCG GAGGGGGGAGGGGATAATGCCACGGAAACCCTGGTAGGTTCCACCGCACA CGTTTGCGTTGCCAAGAAAGGGTGTTTCACAGCCTTCGGAAAAGATCACC TTGTAAAGAGTGTGCACTGGTTCAGTAGAGGTGGTATTGCGTGTATGCGA TATACATTACTTGTGGGTGCCTAGAAGCACGTCATGTAAGGCGTGCACTA ACCTAGTCCTGTTTTTACTCCGCAGTCGTCGTCTTCTTCTCTTTGCTCCT CTTGCCCGAAGCGCCACCGTTCTAAACAATCTGCTGTGGTACAGCATGTT GTTCTACATAATTCTGGCCGAAATCTATTTTTGTGCTTTGGTACCTTGAC CGCGGTTCTAGCTACCGTTGTGCTTTCGACCAGCTGCCAGCCTTCCTTTT TCCTTCACGGTGCCCCACCCCCCCCCACCCCCCCCCCCGCCATGGTCGCT TTTGTCATCGCTTTTCCATTGCCCTATCCGTGTCCTCCTTCCAACTCCAT GTCACGTCTTGGTTGCCAGGCCACCTTGGACCCTGGCCGTGAGGTTTACG CCCCGAAGTGCCTCTGCCTGCTGTCGACATGGCCCTACTTCGGGCCGTTC CGGGAGTGGCTTCTCAACCTCTATCGGATATCGCTGTCTCCTTTCCAGAT ACCTTTGGAGAGGTACGTCGGAAACTTTCTGCTGGAAGTTCCGACGCCTT CGCCCGGTAGAGTCGAGGTGAGTGGAGTGGAGTGACCCACAGTTGTTGTT GCTGTTGTTGTTGTTTGTTGTTGCTGTTGTTATCCTTGTTGCTGTTGCTG TTGTGCTGCTGTCGTTGTTGTTGCTGTTGCTGTTGTTGTTGCTGTTGCTG TTGTGCTGTTGTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGT TGTTGTTGTTGTTGTTGTTGTGGTTGTGGTTGTGGTTGTGGTTGTTGTTG ATGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTGTTGCTGTTGCGCTGTT GTAGTTCTCCTTGTTGTTGATGTCGTTGTCGTCTTTGTTGTTCGTTTTGT CGTTTGTTGTTGTGTTGTTTATGGAGTGGAATATTAAATACTCCATGCGT AAGTGTTATCGTGGACTGCTTGCCCATGCCGATCTCCTTGGTGAACTTTT AGAGGAGTCGCAGCACTCTTGTTGGTGTTTTCCCCCGGTGTACACTTGCG TATATCGGCGCCATTTGGTCATGTCTCCGTTTTCGAGTGACGCCTCCCTC ATACCTCCCTCCGCGCGCCTCGTTCCCCCCTCGAAGGTGCTGTACAACAT GGGCAACACGACAATCACATTCGCGTGCCCCCCGCCCAACAAGCCGGTGG CGTGGGGCTCGGTCCCCTTCGAGCCGCTCTTCCAGTGCCTTAGCCACGAG AACATCGTCACCCTGCTAACCTGCCTTCTGCTGGAGAGGTGCGGTCGTCT TCGCTGTTAATGTTGTCGTTGTTGTTGTTGCTGCTGTTGCTGTTGCCGTT ACCGTCGCCGTTACCATTGCCATAGCTATCTGTTGCTAATTGTGGTTGTC GTCGTTGTTAATGATGATGTTGCCGTTACTGTTTATGTATTGCAAACCGT TCCGGTCTCTGCTCAGTACCTTTAACACTCGTCCGACTTACACGTTCCGT GGTCACAAGCTAACTACCCAGAAAGGGTGCAGTACTCATGAACCTCGCTG TTGTTATGACGGCCACGTTGCCCTTGCCGCTGCTGCTGCTGCTGCCGCTG TTCTTACGCCCGTAGGTCCATCTTGCTCAAAAGCTCACAGCTCAGCCTAC TCACGCCCTGTGCTGAGGCGAGTATTGTTACAATAACGTTGTTACAATAG TGCCGTTCGTCGCTCTATCACCCATCACAGGGTAACCTATAAAGATGCAA GTATTAAAATATAAATAAAAAAGCAACCGAGAGGTCGAGGAGGAGATTAC AAGGTTGAGTCATTTTATATTTTTTGTGTCTCTTTATCACCCCTTGCTGT TGGGCCTACGGCGCTTGTAGCAAACTAGCTGCAGAGAGACAAAGCGAACC AACCTATCGCTCTCTGGCCTGACATTCATATTTGGGTGTTCATCCATACA TGTAGGGAAACACACATTTTGGAAGAACACGTATCAAAAAAGATATACAT TCCGACCGAGTCAAAACGTTAACTTCGTTGTTTTTCGGATTCGCGTTGCG GTTGTCGACGTGGTAAGGGAGCTTATCCCTAGGCCGTCCGCCATTCTCCC CGCCGCTGGTCTTGATGTGCTTTGCTGCAGATGTGGGAGCTCGAGTCGCT TGTGTCTTTTTTTGCACAATACTTGTTTGATACATTTGAGAGATGATGTT GCTCAAGATCCCTGTCTCTTGGACACACAAGGGGCTTGTATTTGCTCGAG AGATGTCTGTCTTTTCCATCCACAAGACTTGCTATAGCTCGAGGTCTGTG CATGTGCGATACACGAGAGGATGTTGTTGTAGCTCAAGACCTCTCTCTGT CTTGCCGCCCCCCCCCCCCCCTCCTCCCTGCAGGTGCTGACCCTAGTGCT GTACCCCTTGAGCTGGAGCCACGTGTACATCCCCGTGTTGCCCGAGGCAT TGCTAGGAGTTCTAGCGGCTCCGATGCCTTTCCTGATTGGGGTGCATACG AATTTCGTTGAGGGTACCGACATGGACGTTGCGCCTTACGTCGTGCAGGT GAGAAAGAGGGGTAGATGTTGCTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6752:1306..5630-

>mRNA_Ecto-sp13_S_contig6752.17671.1 ID=mRNA_Ecto-sp13_S_contig6752.17671.1|Name=mRNA_Ecto-sp13_S_contig6752.17671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1533bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6752:1306..5630- (Ectocarpus species13 EcNAP12_S_4_19m)
CATTCCGAAAGAAACGCTCGGCTGAACGAGTACTTCGCGGTAGTGGGACT
ACACGACGGGCCGCTGCTGTTTTCCGACCCTCTTCCAAACGAGTCTCCCC
CCTCGCCGGGGAGAAGCTCAACGGTACCAGCACCACCAGCAGACAAGAAG
AAGAACGGGGATGGGGCTGTTTTCGGGGACCATGCGGGGAGAGAGGTGAA
CTCGGGGGGCTCAAGAGTCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCCGCTGCGACGCCGGCGATGAAGGGCGGAGGGATCGGC
GGTGGAAGTAGCCTCGACAAGAGCACCGACACAACAAAGAGCAACGGCAC
GGCCTCGACCGTAGGGTTAAACAGCCACGGCGGCAGCAGCAGCAGCAGCG
ACGGCGGCAGCAGCGACAGCAACAGCACCGACAGTGAAACAACAACTACG
ACAACGGGGCGGCTGGCGGAAGGCGTCCCGCAGCAGGGGGGCACCGCAGA
GTCTGCGCCGCCCCCCACCCCCTTCGTGCGGCCAAACCTTGTCAAGCGAC
GGACGTACGGTAGCTGCGAGCTTGGAAAGATTCAGGCTCGGCCCGGGGGG
ATGAGCGGGCCCCTTCACACAAGGTTTCGGGCGAGGGTGCTGCACAGGTT
TCCCGGGTACGACCACGAGGGGAACGGGTGCGCCTTTCCGGCTAACCTGC
CGCTGTTCTGCCTGCCCGGCGGGCTCAAGCTGAGCCTGGAGATGACCCTG
CCCACATTCTTCACCTTCGTCCACACGAGGGCTAACGGCCAGCACATGTT
CGGGTACTGCCTCTGTCTGCACGAGCCGTTGGGAACGCGACATCGGATAG
AACTGCAGGGGCTGCTGGACGCCCACAACAAGGCGGTTTCGCGGGCGGAG
GGGGGAGGGGATAATGCCACGGAAACCCTGGCCACCTTGGACCCTGGCCG
TGAGGTTTACGCCCCGAAGTGCCTCTGCCTGCTGTCGACATGGCCCTACT
TCGGGCCGTTCCGGGAGTGGCTTCTCAACCTCTATCGGATATCGCTGTCT
CCTTTCCAGATACCTTTGGAGAGGTACGTCGGAAACTTTCTGCTGGAAGT
TCCGACGCCTTCGCCCGGTAGAGTCGAGGTGCTGTACAACATGGGCAACA
CGACAATCACATTCGCGTGCCCCCCGCCCAACAAGCCGGTGGCGTGGGGC
TCGGTCCCCTTCGAGCCGCTCTTCCAGTGCCTTAGCCACGAGAACATCGT
CACCCTGCTAACCTGCCTTCTGCTGGAGAGGTCCATCTTGCTCAAAAGCT
CACAGCTCAGCCTACTCACGCCCTGTGCTGAGGCGAGTATTGTGCTGACC
CTAGTGCTGTACCCCTTGAGCTGGAGCCACGTGTACATCCCCGTGTTGCC
CGAGGCATTGCTAGGAGTTCTAGCGGCTCCGATGCCTTTCCTGATTGGGG
TGCATACGAATTTCGTTGAGGGTACCGACATGGACGTTGCGCCTTACGTC
GTGCAGGTGAGAAAGAGGGGTAGATGTTGCTAA
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