prot_Ecto-sp13_S_contig6746.17662.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6746.17662.1
Unique Nameprot_Ecto-sp13_S_contig6746.17662.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length535
Homology
BLAST of mRNA_Ecto-sp13_S_contig6746.17662.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 638 bits (1645), Expect = 3.100e-215
Identity = 438/538 (81.41%), Postives = 454/538 (84.39%), Query Frame = 0
Query:    1 MKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGNTADGRFVDEIYRRGLTPEDLDEVLRQAETQGFKVVHHNDFAAFSAYLANATQSLQRQFEARSLDFESFFTWQNFIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAMAGVCGRPPLALRPAGDGLRQRTLDGVFGVARRGEDVARGSSEAEGDCAAVGGARGREETGESRAPKSASTWEGAIDIDGFPDPGSASDSSDGCSVVEVVSRPVDGGGXXXXXXXXXXXXXXXXGSKRKAAPAAAVGTSXXXIAGXXXXXXXXXXSAIRTSPITLSPSKPGTAAASSRSVLHGGAGAEDSPLPTTLGRRGGGQSGSVDRNSSRRSKRPRPPDEGCCDGDDASSPLQSSAQGISGGGGSEWGGVEGTRNKKARSLSFVLDDEDDNKKDGXXRGGDGDLPQANGXXXXXXXXXXXXXXX-SLGSLPPTASRLV---VGGXXXXVVDLSLDSPSPPVPPRSRPRTAVSPPRPSXXXGGGISGGAGTDGIVLEACSSDDEFAL 534
            MKDGRLVRQKKAMLRAKSEGVAAEVEVHVEG+TADGRFVDEIYRRGLTPEDLDE LRQAETQGFKVV HNDFA+FSAYLA+ATQSLQ QFEARSLDFESFFTWQN IRFSKGQVP+TP SA XXXXXXXXXXXXXXXXXX  GRPPTSA+AG CGRPPLA RPA  GLRQRTLDG FGVARRGED+ARGS +AEGDCAAVG AR REE+ ESRAPK+ASTWEGAIDIDG PDPG+ASDSSDGCSVVEVV RP+DGGG   XXXXXXXXXXXXX  K K+APA      XXX   XXXXXXXXX S  RTSPITLSPS+PG +A SSRSVLHGG GAEDSPLPTTL R GGGQSGSV RNSS R KRPRP DEG  DGD ASSPLQ  AQGI  G G EWGGVEGTR KKARSLSFV DDE       XX     DL QAN XXXXXXXXXXXXXXX SLGSLPP ASR V      XXXXVVDLSLDSPSPPVPPRSRPRTAVSPPRP+   GG +SGGAGTDGIVLEACSSDDEFAL
Sbjct:  642 MKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFASFSAYLADATQSLQIQFEARSLDFESFFTWQNLIRFSKGQVPVTPTSAXXXXXXXXXXXXXXXXXXXRRGRPPTSAVAGGCGRPPLASRPACGGLRQRTLDGAFGVARRGEDIARGSGKAEGDCAAVGDARVREESAESRAPKAASTWEGAIDIDGSPDPGAASDSSDGCSVVEVVVRPIDGGGGSAXXXXXXXXXXXXXXXKGKSAPAXXXXXXXXXXXXXXXXXXXXXSSVRRTSPITLSPSEPGRSATSSRSVLHGGEGAEDSPLPTTLARGGGGQSGSVGRNSSSRRKRPRPADEGSRDGDGASSPLQYWAQGIKSGDGREWGGVEGTRIKKARSLSFVCDDEXXXXXXXXXXXXXSDLRQANXXXXXXXXXXXXXXXXXSLGSLPPAASRSVDXXXXXXXXXVVDLSLDSPSPPVPPRSRPRTAVSPPRPTSSSGGAVSGGAGTDGIVLEACSSDDEFAL 1179          
BLAST of mRNA_Ecto-sp13_S_contig6746.17662.1 vs. uniprot
Match: D7FIK5_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK5_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 4.750e-203
Identity = 424/541 (78.37%), Postives = 435/541 (80.41%), Query Frame = 0
Query:    1 MKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGNTADGRFVDEIYRRGLTPEDLDEVLRQAETQGFKVVHHNDFAAFSAYLANATQSLQRQFEARSLDFESFFTWQNFIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAMAGVCGRPPLALRPAGDGLRQRTLDGVFGVARRGEDVARGSSEAEGDCAAVGGARGREETGESRAPKSASTWEGAIDIDGFPDPGSASDSSDGCSVVEVVSRPVDGGGXXXXXXXXXXXXXXXXGSKRKAAPAAAVGTSXXXIAGXXXXXXXXXXSAI----RTSPITLSPSKPGTAAASSRSVLHGGAGAEDSPLPTTLGRRGGGQSGSVDRNSSRRSKRPRPPDEGCCDGDDASSPLQSSAQGISGGGGSEWGGVEGTRNKKARSLSFVLDDEDDNKKDGXXRGGDGDLPQANGXXXXXXXXXXXXXXXSLGSLPPTASRLVVGGXXXXVVDLSLDSPSPPVPPRSRPRT---AVSPPRPSXXXGGGISGGAGTDGIVLEACSSDDEFAL 534
            MKDGRLVRQKKAMLRAKS+GVAAEVEVHVEG+TADGRFVDEIYRRGLTPEDLDE LRQAETQGFKVV HNDFAAFSAYLA+ATQSLQRQFEARSLDFESFFTWQN IRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSA A        A RPAGDGLRQRTLDGVFGVAR GED A G  EAEG+C AVGGARGREET ES APK+AST EGAIDIDG PDPGSASDSSDGCSVVEVV RP+DGG XXXXXXXXXXXXXXXXGSKRKAAPA A GT XXX   XXXXXXXXXX       RTSPI LSPS+PG A   SRSVLHGG GAEDSPLPTTLGRR GGQSGSV RNSSRRSKRPRP DEG   GD +SSPLQS AQGISGGGGSEWGGVEGTRNKKARSLSFVLDDE       XX            XXXXXXXXXXXXXXX  GSLP  ASR V  GXXXX                        AVSPPRP+   GGG+SGG GTDGIVLEACSSDDEF+L
Sbjct:    1 MKDGRLVRQKKAMLRAKSDGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFAAFSAYLADATQSLQRQFEARSLDFESFFTWQNLIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAAAXXXXXXXXASRPAGDGLRQRTLDGVFGVARSGEDGASGGGEAEGNCPAVGGARGREETAESHAPKAASTREGAIDIDGSPDPGSASDSSDGCSVVEVVVRPIDGGXXXXXXXXXXXXXXXXXGSKRKAAPAVAAGTXXXXXXXXXXXXXXXXXXXXXXVSRTSPIALSPSEPGAAXXXSRSVLHGGGGAEDSPLPTTLGRRAGGQSGSVGRNSSRRSKRPRPADEGSRGGDGSSSPLQSCAQGISGGGGSEWGGVEGTRNKKARSLSFVLDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGSLPSAASRSVHDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSPPRPTSSSGGGVSGGTGTDGIVLEACSSDDEFSL 541          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6746.17662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF35_9PHAE3.100e-21581.41ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIK5_ECTSI4.750e-20378.37ERCC4 domain containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6746contigEcto-sp13_S_contig6746:3592..6171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6746.17662.1mRNA_Ecto-sp13_S_contig6746.17662.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6746 2987..8014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6746.17662.1 ID=prot_Ecto-sp13_S_contig6746.17662.1|Name=mRNA_Ecto-sp13_S_contig6746.17662.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=535bp
MKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGNTADGRFVDEIYRRGLTPE
DLDEVLRQAETQGFKVVHHNDFAAFSAYLANATQSLQRQFEARSLDFESF
FTWQNFIRFSKGQVPLTPKSAAAAAAAGKAAAAAKAARGGRRGRPPTSAM
AGVCGRPPLALRPAGDGLRQRTLDGVFGVARRGEDVARGSSEAEGDCAAV
GGARGREETGESRAPKSASTWEGAIDIDGFPDPGSASDSSDGCSVVEVVS
RPVDGGGGTGSGSSTGSGSGSTSGSKRKAAPAAAVGTSSSSIAGGGVSSA
AAASSAIRTSPITLSPSKPGTAAASSRSVLHGGAGAEDSPLPTTLGRRGG
GQSGSVDRNSSRRSKRPRPPDEGCCDGDDASSPLQSSAQGISGGGGSEWG
GVEGTRNKKARSLSFVLDDEDDNKKDGGGRGGDGDLPQANGSGSASGSGD
GKGSGSSLGSLPPTASRLVVGGGGGGVVDLSLDSPSPPVPPRSRPRTAVS
PPRPSSSSGGGISGGAGTDGIVLEACSSDDEFAL*
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