prot_Ecto-sp13_S_contig6744.17657.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6744.17657.1
Unique Nameprot_Ecto-sp13_S_contig6744.17657.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length335
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6744.17657.1 vs. uniprot
Match: D7FMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMA1_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.150e-136
Identity = 272/332 (81.93%), Postives = 277/332 (83.43%), Query Frame = 0 
Query:    6 AHRYPNSTTAPVATAPVAGAPAPRLGSSVAREAHAQSASSLTQTRAKETGMSFGSGFTSWGTSRADDDXXXXXXXXXXXXXDRNGDAAVLKQELTWGQFITQRIEDPASPTKNNARGGPAPPRKPPAGFDXXXXXXXXXXXXIMSTFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDAASGRPDGKGDGARNSTGGGGAVGGA--RDTTASRGRIXAGASGIGXXXXXXXXXXXXXXTPGFHHKKPTAPPPAYSSLPRPREAPLAAPLGGGAERGXXXRSAQPARGGVPGRGTRRGESAPRLSEDLQSGGRRALSGAPSLQPRKEETR 335
            AHRY NST APVATAP A APAPRLG S AREA +QSASSLTQ RAKETGMSFGS FTSWGTSRADDD             DRNGDAAVLKQELTWGQFITQR E+PASPTKNN RGGPAPPRKPPAGF+ XXXXXXXX   IMSTFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDA SGRPDGKGDGARNSTG            + ASR R  AGA GIG   XXXXXXXXXXX  GFHHKKPT PPPAYS+LPRPREAPLAAPLGGGAERGXXXRSAQPARGGVPGRGTRRGESAPRL ED QSGGRRALSGAPSLQPRK ETR
Sbjct:  259 AHRYSNSTAAPVATAPGAVAPAPRLGGSGAREARSQSASSLTQARAKETGMSFGSRFTSWGTSRADDDRSDEGSAESSAGSDRNGDAAVLKQELTWGQFITQRFEEPASPTKNNTRGGPAPPRKPPAGFNGXXXXXXXXIDDIMSTFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDATSGRPDGKGDGARNSTGXXXXXXXXXRNSSIASRARSGAGAGGIGGKTXXXXXXXXXXXAQGFHHKKPTVPPPAYSTLPRPREAPLAAPLGGGAERGXXXRSAQPARGGVPGRGTRRGESAPRLLEDSQSGGRRALSGAPSLQPRKGETR 590
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BLAST of mRNA_Ecto-sp13_S_contig6744.17657.1 vs. uniprot
Match: A0A6H5KT18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT18_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 2.360e-101
Identity = 250/401 (62.34%), Postives = 259/401 (64.59%), Query Frame = 0 
Query:    1 MRPAAAHRYPNSTTAPVATAPVAGAPAPRLGSSVAREAHAQSASSLTQTRAKETGMSFGSGFTSWGTSRADDDXXXXXXXXXXXXXDRNGDAAVLKQELTWGQFITQRIEDPASPTKNNARGGPAPPRKPPAGFDXXXXXXXXXXXXIMSTFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDAASGRPDGKGDGARNSTGGGGAVGGARDTTASRGRIXAGASGIGXXXXXXXXXXXXXXTPGFHHKKPTAPPPAYSSLPR------------------------------------------------------------------PREAPLAAPLGGGAERGXXXRSAQPARGGVPGRGTRRGESAPRLSEDLQSGGRRALSGAPSLQPRKEETR 335
            MR AAAHRY NST APVA+AP AGA AP+LGSS AREA +QSASS TQ RAKETGMSFGSGFTSW TSRADDD XXXXXXXXXXX DRNGDAAVLKQ+          I+D                                    IMSTFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDAASGRPDGKGDGAR  TGGGG+ GGARD+TASRGR  AGA GIGXXXXXXXXXXXXXX  GFHH+KPTAPPPAYSSLPR                                                                  PREAP  AP GGGAERG   RSAQPARGGV GRGTRRGESAPRL +  QSGGRRALSGAPSLQPRKEETR
Sbjct:  180 MRHAAAHRYSNSTAAPVASAPGAGASAPQLGSSGAREAQSQSASSSTQARAKETGMSFGSGFTSWSTSRADDDRXXXXXXXXXXXSDRNGDAAVLKQD--------NDIDD------------------------------------IMSTFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDAASGRPDGKGDGARIITGGGGSGGGARDSTASRGRSGAGAGGIGXXXXXXXXXXXXXXVSGFHHRKPTAPPPAYSSLPRXIIXXXXXXXXXARDSTASRGRSGAGAGXIXXXXXXXXXXXXXXXXSGFHHRKPTAPPPAYSSLPRPREAPQEAPSGGGAERGGGGRSAQPARGGVSGRGTRRGESAPRLMDHSQSGGRRALSGAPSLQPRKEETR 536
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6744.17657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMA1_ECTSI1.150e-13681.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT18_9PHAE2.360e-10162.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6744contigEcto-sp13_S_contig6744:5070..7521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6744.17657.1mRNA_Ecto-sp13_S_contig6744.17657.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6744 5070..7521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6744.17657.1 ID=prot_Ecto-sp13_S_contig6744.17657.1|Name=mRNA_Ecto-sp13_S_contig6744.17657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=335bp
MRPAAAHRYPNSTTAPVATAPVAGAPAPRLGSSVAREAHAQSASSLTQTR
AKETGMSFGSGFTSWGTSRADDDRSDQGSAESSAESDRNGDAAVLKQELT
WGQFITQRIEDPASPTKNNARGGPAPPRKPPAGFDGFDDDDDNDIDDIMS
TFGPVSIRTGREDILFGPQDEEPLPMFDRIIGKARDAASGRPDGKGDGAR
NSTGGGGAVGGARDTTASRGRIGAGASGIGGKTTGGIRGRSSAGTPGFHH
KKPTAPPPAYSSLPRPREAPLAAPLGGGAERGGGGRSAQPARGGVPGRGT
RRGESAPRLSEDLQSGGRRALSGAPSLQPRKEETR
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