prot_Ecto-sp13_S_contig6743.17656.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6743.17656.1
Unique Nameprot_Ecto-sp13_S_contig6743.17656.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 8.650e-92
Identity = 159/188 (84.57%), Postives = 171/188 (90.96%), Query Frame = 0
Query:    3 LRTSFVGDRSVLSGRDSSSHKTNSSSKSIGRETVADSLAPTFTVVTLEVEEREAEGATSRTGLSSVPISEVDVSEMKSDASSDTDSEDDHAPPRARGGGQPGCCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            L TSFVGDRSVLSGRDSSSHKT SSSKSIGR+ +ADS+APTF V T EVEER AEGA SR G++SVP+SEVDVSEMKSDASSDTD+EDD+APP  RGGGQPGCCG GEKIKRWAARLPMDK+KILVVVWQILSVFPSI AVDFPPAY RFLSWI+MLSFD  HVLSASCVFPV++FYQ LLVTTLVPL
Sbjct:  998 LSTSFVGDRSVLSGRDSSSHKTGSSSKSIGRDRLADSVAPTFKV-TSEVEERGAEGAASRKGVTSVPVSEVDVSEMKSDASSDTDTEDDNAPPMVRGGGQPGCCGHGEKIKRWAARLPMDKIKILVVVWQILSVFPSITAVDFPPAYARFLSWINMLSFDLEHVLSASCVFPVMDFYQRLLVTTLVPL 1184          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 2.390e-81
Identity = 145/183 (79.23%), Postives = 153/183 (83.61%), Query Frame = 0
Query:    8 VGDRSVLSGRDSSSHKTNSSSKSIGRETVADSLAPTFTVVTLEVEEREAEGATSRTGLSSVPISEVDVSEMKSDASSDTDSEDDHAPPRARGGGQPGCCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            +  RSVLSGRDSSSHK  SS KSIGR  +  S          EVEER  EGA SR G++SVPISEVDVSEMKSDASSDTD EDDHAPP ARGG QPGCCGQGEKIKRWAARLPMDK+KILVVVWQILSVFPSI AVDFPPAY RFLSWIDMLSFD GHVLSASCVFPV++FYQSLL+TTL PL
Sbjct: 1005 LSTRSVLSGRDSSSHKVGSSGKSIGRNALTGS----------EVEERRGEGAASRKGVTSVPISEVDVSEMKSDASSDTDGEDDHAPPMARGGDQPGCCGQGEKIKRWAARLPMDKLKILVVVWQILSVFPSITAVDFPPAYARFLSWIDMLSFDLGHVLSASCVFPVMDFYQSLLLTTLGPL 1177          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 4.370e-35
Identity = 65/104 (62.50%), Postives = 82/104 (78.85%), Query Frame = 0
Query:   87 DSEDDHAPPRARGGGQPGCCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            D++ D AP  A  GGQ G  G GEKIK WA+R+P+DK+KILVVVWQIL+VFPSI  VD+PP+Y RFLSWID+++FD GH+ SASC  P + FY+ LL+TTL P+
Sbjct: 1157 DADADAAPAEAVAGGQSGSRGLGEKIKGWASRVPLDKLKILVVVWQILTVFPSITGVDYPPSYSRFLSWIDVVNFDVGHIFSASCALPFLTFYERLLLTTLAPI 1260          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.110e-32
Identity = 59/87 (67.82%), Postives = 72/87 (82.76%), Query Frame = 0
Query:  104 GCCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            GCCG G +IKRW + LPMDK+KILVVVWQIL+VFPSI  V FPP+Y RFLSWID+++ D GHV +ASC+ P V+FYQ LL+TTL P+
Sbjct:  777 GCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWIDVVNLDVGHVFTASCLLPSVSFYQRLLLTTLTPI 863          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.840e-31
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 0
Query:  104 GCCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            GCCG G +IKRW + LPMDK+KILVVVWQIL+VFPSI  V FPP+Y RFLSW+D+++ D G V +ASC+ P V+FYQ LL+TTL P+
Sbjct: 1119 GCCGLGGRIKRWVSLLPMDKLKILVVVWQILTVFPSITGVQFPPSYSRFLSWVDVVNLDVGQVFTASCLLPSVSFYQRLLLTTLTPI 1205          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 6.280e-31
Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = 0
Query:  105 CCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            CCG GEKIKRWAARLPMDK+KILVVVWQIL+VFP+I   +FPPAY +FLS ID ++ D G + S +C+ P V+FYQ LLVTT+ P+
Sbjct: 1109 CCGIGEKIKRWAARLPMDKLKILVVVWQILTVFPTITGAEFPPAYAQFLSVIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPI 1194          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 8.320e-31
Identity = 57/86 (66.28%), Postives = 69/86 (80.23%), Query Frame = 0
Query:  105 CCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            CCG GEKIKRW ARLPMDK+KILVVVWQIL+VFPSI   +FPPAY +FLS ID ++ D G + S +C+ P V+FYQ LLVTT+ P+
Sbjct:  604 CCGIGEKIKRWTARLPMDKLKILVVVWQILTVFPSITGAEFPPAYAQFLSIIDFINLDIGSIFSGTCILPRVSFYQRLLVTTVTPI 689          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: A0A6H5JZ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ37_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.920e-23
Identity = 65/96 (67.71%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    8 VGDRSVLSGRDSSSHKTNSSSKSIGRETVADSLAPTFTVVTLEVEEREAEGATSRTGLSSVPISEVDVSEMKSDASSDTDSEDDHAPPRARGGGQP 103
            +  RSVL   DSSSHK  SS KS GR+T+ADS+AP   V + EVE R  EGA SR G+++VPISEVDVSEMKS+ASSDTDSEDDHAPP ARG G P
Sbjct:  504 LSTRSVLFDCDSSSHKAGSSGKSPGRDTLADSVAPALKVAS-EVEGRGGEGAVSRKGVTTVPISEVDVSEMKSEASSDTDSEDDHAPPMARGVGVP 598          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 6.110e-16
Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:   97 ARGGGQPGCCGQGEKIKRWAAR-------LPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVP 189
            ARGG Q G  G   K K  AAR       LP+ K+KI+VVVWQI + F  +  V FPP Y +FLS I + SFD G ++SA+C+   ++FY  LL+ T+ P
Sbjct:  926 ARGGQQQGMGGGDRKKKTAAARIGEMLARLPLSKLKIVVVVWQISNAFAEVTKVPFPPVYEKFLSIIGIFSFDLGWMISAACLTAGIDFYDKLLIVTIGP 1025          
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Match: A0A6H5JU65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU65_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.010e-15
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0
Query:  106 CGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYVRFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL 190
            CG    + +    LP+ K+KI +VV+QIL+ +  I  VDFPPAY + L ++D+L+ D G VLSASC+F   NFY  L++TTLVP+
Sbjct: 1496 CGNSRMVSK-VKELPVHKLKIPIVVFQILTQYADITTVDFPPAYTKLLGFMDVLNLDMGWVLSASCIFSP-NFYGRLVLTTLVPI 1578          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6743.17656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRH3_ECTSI8.650e-9284.57Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH4_ECTSI2.390e-8179.23Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRH0_ECTSI4.370e-3562.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FRH1_ECTSI1.110e-3267.82Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JS31_9PHAE1.840e-3165.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG6_ECTSI6.280e-3166.28Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JCK8_9PHAE8.320e-3166.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ37_9PHAE1.920e-2367.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0A8_ECTSI6.110e-1646.00Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JU65_9PHAE4.010e-1548.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6743contigEcto-sp13_S_contig6743:3398..3970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6743.17656.1mRNA_Ecto-sp13_S_contig6743.17656.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6743 557..7776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6743.17656.1 ID=prot_Ecto-sp13_S_contig6743.17656.1|Name=mRNA_Ecto-sp13_S_contig6743.17656.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MPLRTSFVGDRSVLSGRDSSSHKTNSSSKSIGRETVADSLAPTFTVVTLE
VEEREAEGATSRTGLSSVPISEVDVSEMKSDASSDTDSEDDHAPPRARGG
GQPGCCGQGEKIKRWAARLPMDKMKILVVVWQILSVFPSINAVDFPPAYV
RFLSWIDMLSFDRGHVLSASCVFPVVNFYQSLLVTTLVPL*
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