mRNA_Ecto-sp13_S_contig6735.17648.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: D8LR93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR93_ECTSI) HSP 1 Score: 103 bits (258), Expect = 1.310e-22 Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 694 QIPPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYMLTA 915
QIPP+N+AGLAW SC CCWPIGLYA+ITS++VY +W+ GD +GA ASE + ASIA+I IGTIL ++ + TA
Sbjct: 70 QIPPDNHAGLAWFSCLCCCWPIGLYAVITSHTVYGRWKGGDCEGANRASENAKNASIAAILIGTILCIVQLTTA 143
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: T2M739_HYDVU (Proline-rich transmembrane protein 1 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2M739_HYDVU) HSP 1 Score: 65.1 bits (157), Expect = 1.760e-8 Identity = 33/77 (42.86%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 700 PPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGT------ILFLLYMLT 912
PP+NY+ LAW +C FCCWP+GL AI+ S V + G+ AK AS+ ++ S+C G ILFL+ LT
Sbjct: 109 PPDNYSILAWLTCLFCCWPLGLCAIVKSIEVNTAIAEGNLSRAKFASDNAKRFGFMSLCTGIFIHGAWILFLILYLT 185
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: UPI001664A213 (CD225/dispanin family protein n=1 Tax=Nonomuraea glycinis TaxID=2047744 RepID=UPI001664A213) HSP 1 Score: 63.9 bits (154), Expect = 4.230e-8 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 691 GQIPPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYML 909
G PP+N+ A + FCC P+G+ +I+ S+ V KWQSGDYQGA EASE + S+ G I ++L ++
Sbjct: 102 GGAPPDNHLVAAILTTLFCCLPLGIVSIVKSSQVNQKWQSGDYQGAMEASEEAKTWWKRSLIFGAIAWVLIVV 174
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: A0A8J6I6B5_9ACTN (CD225/dispanin family protein n=1 Tax=Sporichthya sp. TaxID=65475 RepID=A0A8J6I6B5_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 7.710e-8 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 1
Query: 682 GVQGQIPPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYMLTAG 918
G G P+NY A S CC P+G+ +I+ +N V S+W +GD+ GAKEASE + +I S +G I+ L + G
Sbjct: 97 GTYGGEKPDNYLVWAILSTILCCLPLGVASIVFANKVNSRWNAGDFAGAKEASEKAKMFAIVSAVVGVIVTALLLSLGG 175
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: A0A8B6XKA1_HYDVU (uncharacterized protein LOC100215142 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XKA1_HYDVU) HSP 1 Score: 62.4 bits (150), Expect = 8.260e-8 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 700 PPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYML 909
PP+N++ LAW +C FCCWP+G+ +II S V + GD A+ ASE+ R+ AS+ G L ++++
Sbjct: 73 PPDNHSALAWLTCLFCCWPLGIVSIIKSMEVNTAIGLGDTMRARIASESARKFGYASLGCGIFLHAIWII 142
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: R6TXL2_9BACE (zinc_ribbon_2 domain-containing protein n=1 Tax=Bacteroides sp. CAG:770 TaxID=1262751 RepID=R6TXL2_9BACE) HSP 1 Score: 61.2 bits (147), Expect = 8.380e-8 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 703 PNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYML 909
P+NY + + FCC P G+ I+ S V SK+QSGDY+GA +AS ++ S+ ++ G + +LLYM+
Sbjct: 48 PDNYLVYSILTTLFCCLPFGIVGIVKSAQVSSKYQSGDYEGAVQASRDAKKWSMIALICGLVWYLLYMI 116
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: UPI001F03C9C2 (cysteine-rich and transmembrane domain-containing protein 1-like isoform X1 n=3 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03C9C2) HSP 1 Score: 60.1 bits (144), Expect = 6.540e-7 Identity = 25/63 (39.68%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 706 NNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILF 894
N+Y GL+ +C FCCWP+G++AII S + + +G+Y A +++T R ++ +I G ILF
Sbjct: 99 NDYMGLSVFACLFCCWPVGIFAIIKSRESRNHYNAGNYDEAMRSAKTARNLAVIAIICGIILF 161
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: UPI00129C50FE (CD225/dispanin family protein n=2 Tax=Ornithobacterium rhinotracheale TaxID=28251 RepID=UPI00129C50FE) HSP 1 Score: 57.8 bits (138), Expect = 7.420e-7 Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 703 PNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYML 909
P NY A S FCC P+G+ +I+ S V SKW++G+Y+GA+++SE ++ +I S TI++ L ++
Sbjct: 23 PENYLVWAILSTCFCCLPLGVVSIVKSLEVSSKWEAGNYEGARKSSEDAKKWAIYSALSVTIIYFLILM 91
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: A0A8B6XK58_HYDVU (uncharacterized protein LOC100200841 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XK58_HYDVU) HSP 1 Score: 57.8 bits (138), Expect = 4.450e-6 Identity = 25/70 (35.71%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 700 PPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYML 909
PPN++ LAW +C FCCWP+G+ +II S V + + A+ ASE+ ++ AS+ G + L++++
Sbjct: 95 PPNSHRALAWLTCLFCCWPLGVASIIKSMEVDTAIAQNNLTRAQMASESAKKFGFASLGCGIFMHLIWII 164
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Match: A0A7M5X4E7_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X4E7_9CNID) HSP 1 Score: 55.8 bits (133), Expect = 6.880e-6 Identity = 27/74 (36.49%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 697 IPPNNYAGLAWCSCFFCCWPIGLYAIITSNSVYSKWQSGDYQGAKEASETTRQASIASICIGTILFLLYMLTAG 918
+PP ++ G+A+ C+FCC P+G+YA+ SNSVY Q+GD++ A S+ ++ I +G +L + M+ +G
Sbjct: 45 VPPTHF-GMAFLMCYFCCLPLGIYALAESNSVYIAIQNGDFEEAHRRSKHVKKV----IWVGCLLGPVGMIVSG 113 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6735.17648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6735.17648.1 >prot_Ecto-sp13_S_contig6735.17648.1 ID=prot_Ecto-sp13_S_contig6735.17648.1|Name=mRNA_Ecto-sp13_S_contig6735.17648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp MAKSSKSGSDAGVFSAEDVAEQGFEAPSSMLQGGGVQGQIPPNNYAGLAWback to top mRNA from alignment at Ecto-sp13_S_contig6735:2..5224- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6735.17648.1 ID=mRNA_Ecto-sp13_S_contig6735.17648.1|Name=mRNA_Ecto-sp13_S_contig6735.17648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5223bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6735:2..5224- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6735:2..5224- >mRNA_Ecto-sp13_S_contig6735.17648.1 ID=mRNA_Ecto-sp13_S_contig6735.17648.1|Name=mRNA_Ecto-sp13_S_contig6735.17648.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=366bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6735:2..5224- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |