prot_Ecto-sp13_S_contig67334.17643.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67334.17643.1
Unique Nameprot_Ecto-sp13_S_contig67334.17643.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length35
Homology
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BLAST of mRNA_Ecto-sp13_S_contig67334.17643.1 vs. uniprot
Match: A0A6H5JI18_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI18_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.130e-12
Identity = 32/34 (94.12%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:    1 QDGTDLTFSPPLPQAKLAAIRRLGFGTADKFFVR 34
            QDG  LTFSPPLPQAKLAAIRRLGFGTADKFFVR
Sbjct:  499 QDGMALTFSPPLPQAKLAAIRRLGFGTADKFFVR 532
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BLAST of mRNA_Ecto-sp13_S_contig67334.17643.1 vs. uniprot
Match: D7G835_ECTSI (Similar to peroxisomal n1-acetyl-spermine/spermidine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G835_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.930e-12
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:    1 QDGTDLTFSPPLPQAKLAAIRRLGFGTADKFFVR 34
            +DGT LTFSPPLPQAKLAAIRR+GFGTADKFFVR
Sbjct:  456 KDGTALTFSPPLPQAKLAAIRRVGFGTADKFFVR 489
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67334.17643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI18_9PHAE2.130e-1294.12PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G835_ECTSI2.930e-1291.18Similar to peroxisomal n1-acetyl-spermine/spermidi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 7..33
e-value: 2.4E-4
score: 20.5
NoneNo IPR availableGENE3D3.90.660.10coord: 2..34
e-value: 4.5E-8
score: 35.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67334contigEcto-sp13_S_contig67334:14..118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67334.17643.1mRNA_Ecto-sp13_S_contig67334.17643.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67334 14..118 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67334.17643.1 ID=prot_Ecto-sp13_S_contig67334.17643.1|Name=mRNA_Ecto-sp13_S_contig67334.17643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=35bp
QDGTDLTFSPPLPQAKLAAIRRLGFGTADKFFVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase