prot_Ecto-sp13_S_contig67317.17641.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67317.17641.1
Unique Nameprot_Ecto-sp13_S_contig67317.17641.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: D8LFC6_ECTSI (Homologue of the meiosis-specific protein HOP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC6_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 7.270e-17
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    3 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY 42
            +QVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY
Sbjct:   45 AQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY 84          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: W4FWS5_9STRA (HORMA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWS5_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.080e-9
Identity = 26/42 (61.90%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY 42
            G S++TETQSL ++KNLIRVSIS +C+LR +FP + F+ER Y
Sbjct:   30 GNSKITETQSLNVIKNLIRVSISEICYLRNLFPDEVFKERVY 71          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: A0A6G0XR20_9STRA (HORMA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR20_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.510e-8
Identity = 21/42 (50.00%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY 42
             ++++TETQS++++KN+IRVS+S +C+LR +FP + F+ER Y
Sbjct:   29 ASTKITETQSISVIKNMIRVSVSEICYLRNLFPEEVFKERVY 70          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: A0A485K5J0_9STRA (Aste57867_1544 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K5J0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.810e-7
Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY 42
             ++++T  QSL ++KN+IRVSIS +C+LR IFP + F+ER Y
Sbjct:   24 ASTKITSEQSLNVIKNMIRVSISEICYLRNIFPEEVFRERVY 65          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: A0A8J6E511_9EUKA (Hop1 n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6E511_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 7.030e-7
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    5 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERT 41
            +T   SLTL+KNL R SIST+CH RG+ P +CF+E T
Sbjct:   20 ITNQDSLTLLKNLFRTSISTICHFRGLLPPECFEECT 56          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: UPI001D04C4D8 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D04C4D8)

HSP 1 Score: 51.2 bits (121), Expect = 2.790e-6
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 TSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERT 41
            T  VT  +SLTL++NL+R +IS+VC+LR IFP  CFQ+++
Sbjct:   10 TQSVTYEESLTLMRNLMRTAISSVCYLRNIFPEDCFQDKS 49          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: A0A6A5BFC5_NAEFO (HORMA domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BFC5_NAEFO)

HSP 1 Score: 50.8 bits (120), Expect = 3.810e-6
Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 TSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERT 41
            T  VT  +SLTL++NL+R +IS+VC+LR IFP  CFQ+++
Sbjct:  652 TQSVTFEESLTLMRNLMRTAISSVCYLRNIFPEDCFQDKS 691          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: A0A0L0DH18_THETB (HORMA domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DH18_THETB)

HSP 1 Score: 50.1 bits (118), Expect = 7.140e-6
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERT 41
             T  VT ++SL LV+NL+R SIST+ +LR +FP  CF +RT
Sbjct:   12 ATESVTASESLCLVRNLLRCSISTIAYLRSLFPEHCFYDRT 52          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: A0A5J4YVR6_PORPP (HORMA domain-containing protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVR6_PORPP)

HSP 1 Score: 48.9 bits (115), Expect = 1.760e-5
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    3 SQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERT 41
            S VT+T+SL L+KN +R SIS++ H RG+ P +CF++ T
Sbjct:   21 STVTQTESLALMKNFLRASISSIVHQRGLLPEECFEDAT 59          
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Match: D8M718_BLAHO (HORMA domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M718_BLAHO)

HSP 1 Score: 47.0 bits (110), Expect = 8.680e-5
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    5 VTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY 42
            VT+ QSL +VKN+IR SIS +C+LR +F   CF ++ Y
Sbjct:   10 VTQQQSLAVVKNMIRTSISEICYLRNLFDEDCFCKKNY 47          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67317.17641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LFC6_ECTSI7.270e-1797.50Homologue of the meiosis-specific protein HOP1 n=1... [more]
W4FWS5_9STRA2.080e-961.90HORMA domain-containing protein n=2 Tax=Aphanomyce... [more]
A0A6G0XR20_9STRA6.510e-850.00HORMA domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A485K5J0_9STRA5.810e-752.38Aste57867_1544 protein n=1 Tax=Aphanomyces stellat... [more]
A0A8J6E511_9EUKA7.030e-759.46Hop1 n=1 Tax=Carpediemonas membranifera TaxID=2011... [more]
UPI001D04C4D82.790e-655.00uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A6A5BFC5_NAEFO3.810e-655.00HORMA domain-containing protein n=1 Tax=Naegleria ... [more]
A0A0L0DH18_THETB7.140e-653.66HORMA domain-containing protein n=1 Tax=Thecamonas... [more]
A0A5J4YVR6_PORPP1.760e-551.28HORMA domain-containing protein 1 n=1 Tax=Porphyri... [more]
D8M718_BLAHO8.680e-552.63HORMA domain-containing protein n=1 Tax=Blastocyst... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003511HORMA domainPFAMPF02301HORMAcoord: 10..41
e-value: 4.3E-10
score: 39.5
IPR003511HORMA domainPROSITEPS50815HORMAcoord: 8..42
score: 13.745
IPR036570HORMA domain superfamilyGENE3D3.30.900.10coord: 1..42
e-value: 5.6E-13
score: 50.5
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 4..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67317contigEcto-sp13_S_contig67317:338..463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67317.17641.1mRNA_Ecto-sp13_S_contig67317.17641.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67317 338..463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67317.17641.1 ID=prot_Ecto-sp13_S_contig67317.17641.1|Name=mRNA_Ecto-sp13_S_contig67317.17641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
GTSQVTETQSLTLVKNLIRVSISTVCHLRGIFPAKCFQERTY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003511HORMA_dom
IPR036570HORMA_dom_sf