prot_Ecto-sp13_S_contig6731.17639.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6731.17639.1
Unique Nameprot_Ecto-sp13_S_contig6731.17639.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length426
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6731.17639.1 vs. uniprot
Match: A0A6H5KTG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG5_9PHAE)

HSP 1 Score: 647 bits (1668), Expect = 3.960e-223
Identity = 356/425 (83.76%), Postives = 366/425 (86.12%), Query Frame = 0 
Query:    1 MQSQEDLIGGDDIEVDTSQEVHKGERPSAAGLGMEMTQPGVITSPLSLPAKMSPASPDGSLPDSRRGGPGRVEEREDHPHQGKARQGGISRNGDDPTINTRHSRLRRKTTSDVIGGIEKLETAEELKDQTFGPFQKTRLFETSGFLLGQSWPPLPTXXXXXXSIATPTASTDISVYENNEEWCRRWYILQRGKLTAFSGWGGNHTCVGKMALKGCSVEDAPEKVPEGAPFAFRVRAQQCARNDDSPGASWTLQASTRQEKSRWMNAIRGAADREMDDVSPLGSPLNADDTSFVDADSGRSGGGYGKEGGASNSSSGAEQYRILDMFRMSAAAQRGFQESESDSGDSRNSATTSAGEGXXXKAGATRASEKRSAGGPGLTDGGGELELQSSTGLVEAPVEDAEAASVRERSEEWGQEGRSKSCVFQ 425
            MQSQ+DLIGG DIEVDTSQEV KGERPSAAG GMEMTQPGV  SPLSLPA+ SP +PDGSLPDSR GGPGRVEE+EDHPHQGK RQGGISRNGDDPTINTRHSRLRRKTTSDVIGGIEKLETAEELKDQTFGPFQKTRLFETSGFLLGQSWPPLPTXXXXXX              +NNEEWCRRWYILQRGKLTAFSGWGGNHTCVGKMALKGCSVEDAPEKVPEGAPFAFRVRAQQ           W            WMNAIRGAADR+MDDVS  GSPLNADDTSFVDADSGRSGGGYGKEG ASNSSSGAEQ+RILDMFRMS AAQRGFQES+SDSGDSRNSAT S GE    KAGATR SEKR+AGG GLTDGGGELELQSSTGLV+APVEDAEAASVR RSEEWGQEGRSKSCVFQ
Sbjct:  569 MQSQKDLIGGGDIEVDTSQEVPKGERPSAAGHGMEMTQPGVNISPLSLPAEKSPTAPDGSLPDSRSGGPGRVEEKEDHPHQGKVRQGGISRNGDDPTINTRHSRLRRKTTSDVIGGIEKLETAEELKDQTFGPFQKTRLFETSGFLLGQSWPPLPTXXXXXXXXXXXXXXXXXXXXDNNEEWCRRWYILQRGKLTAFSGWGGNHTCVGKMALKGCSVEDAPEKVPEGAPFAFRVRAQQ-----------W------------WMNAIRGAADRDMDDVSLPGSPLNADDTSFVDADSGRSGGGYGKEGDASNSSSGAEQHRILDMFRMSPAAQRGFQESDSDSGDSRNSATKSVGERVDGKAGATRGSEKRAAGGLGLTDGGGELELQSSTGLVDAPVEDAEAASVRARSEEWGQEGRSKSCVFQ 970
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BLAST of mRNA_Ecto-sp13_S_contig6731.17639.1 vs. uniprot
Match: D7FQV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV2_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 6.850e-124
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0 
Query:  210 MALKGCSVEDAPEKVPEGAPFAFRVRAQQCARNDDSPGASWTLQASTRQEKSRWMNAIRGAADREMDDVSPLGSPLNADDTSFVDADSGRSGGGYGKEGGASNSSSGAEQYRILDMFRMSAAAQRGFQESESDSGDSRNSATTSAGEGXXXKAGATRASEKRSAGGPGLTDGGGELELQSSTGLVEAPVEDAEAASVRERSEEWGQEGRSKSCVFQ 425
            MALKGCSVEDAPEKVPEGAPFAFRVRAQQC RNDD+PGASWTLQASTRQEKSRWMNAIRGAADREMDDVSP GSPLNADDTSFVDADSG SGGGYGKEG ASNSSSGAEQ+R+LDM RMSAAAQRGFQES+SDSGDSRNSA+ SAG+G   KA ATR SEKR+AGG GLTDGGGELELQSS GLV+APVEDAEAASVRERSEEWGQEGRSKSCVFQ
Sbjct:    1 MALKGCSVEDAPEKVPEGAPFAFRVRAQQCPRNDDNPGASWTLQASTRQEKSRWMNAIRGAADREMDDVSPPGSPLNADDTSFVDADSGISGGGYGKEGDASNSSSGAEQHRVLDMLRMSAAAQRGFQESDSDSGDSRNSASKSAGKGVDGKASATRGSEKRAAGGVGLTDGGGELELQSSMGLVDAPVEDAEAASVRERSEEWGQEGRSKSCVFQ 216
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6731.17639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTG5_9PHAE3.960e-22383.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQV2_ECTSI6.850e-12490.28PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 140..274
e-value: 4.8E-9
score: 46.1
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 180..270
e-value: 1.2E-10
score: 41.9
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 166..272
score: 9.601
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 173..279
e-value: 1.8E-12
score: 48.8
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 179..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6731contigEcto-sp13_S_contig6731:70..2654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6731.17639.1mRNA_Ecto-sp13_S_contig6731.17639.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6731 1..3135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6731.17639.1 ID=prot_Ecto-sp13_S_contig6731.17639.1|Name=mRNA_Ecto-sp13_S_contig6731.17639.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp
MQSQEDLIGGDDIEVDTSQEVHKGERPSAAGLGMEMTQPGVITSPLSLPA
KMSPASPDGSLPDSRRGGPGRVEEREDHPHQGKARQGGISRNGDDPTINT
RHSRLRRKTTSDVIGGIEKLETAEELKDQTFGPFQKTRLFETSGFLLGQS
WPPLPTPPPPAPSIATPTASTDISVYENNEEWCRRWYILQRGKLTAFSGW
GGNHTCVGKMALKGCSVEDAPEKVPEGAPFAFRVRAQQCARNDDSPGASW
TLQASTRQEKSRWMNAIRGAADREMDDVSPLGSPLNADDTSFVDADSGRS
GGGYGKEGGASNSSSGAEQYRILDMFRMSAAAQRGFQESESDSGDSRNSA
TTSAGEGGDGKAGATRASEKRSAGGPGLTDGGGELELQSSTGLVEAPVED
AEAASVRERSEEWGQEGRSKSCVFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf