prot_Ecto-sp13_S_contig6730.17638.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6730.17638.1
Unique Nameprot_Ecto-sp13_S_contig6730.17638.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6730.17638.1 vs. uniprot
Match: D7FY59_ECTSI (Ku_PK_bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY59_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.260e-19
Identity = 52/83 (62.65%), Postives = 52/83 (62.65%), Query Frame = 0 
Query:    1 KVGSIDPVSDFQAMMASAIAGDEGGPGCEVNGLATTAYVHVSAPHPRSLCTPTCCCQELADLAVQQMQAVIHTLVRKGTTSSL 83
            KVGSIDPVSDFQAMMASAIAGDEGGP                               ELADLAVQQMQAVIHTLVRKGTTSSL
Sbjct:   18 KVGSIDPVSDFQAMMASAIAGDEGGP-------------------------------ELADLAVQQMQAVIHTLVRKGTTSSL 69
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6730.17638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY59_ECTSI5.260e-1962.65Ku_PK_bind domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6730contigEcto-sp13_S_contig6730:464..1028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6730.17638.1mRNA_Ecto-sp13_S_contig6730.17638.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6730 464..1029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6730.17638.1 ID=prot_Ecto-sp13_S_contig6730.17638.1|Name=mRNA_Ecto-sp13_S_contig6730.17638.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
KVGSIDPVSDFQAMMASAIAGDEGGPGCEVNGLATTAYVHVSAPHPRSLC
TPTCCCQELADLAVQQMQAVIHTLVRKGTTSSL
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