mRNA_Ecto-sp13_S_contig673.17637.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig673.17637.1
Unique NamemRNA_Ecto-sp13_S_contig673.17637.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: D7G765_ECTSI (Flavoprotein Monooxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G765_ECTSI)

HSP 1 Score: 644 bits (1660), Expect = 1.620e-227
Identity = 323/333 (97.00%), Postives = 325/333 (97.60%), Query Frame = 3
Query:    3 GHPMLCLRLLSLHNALRRTALRLGCDILSGMSCNKVYPSLGEDGKKRAALLMAVGQGLEXXXXXXXXXVVLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSARGGDEQASRNRPANKGMGDAEFVYNWEPLKLHHFPWQPK 1001
            GHPMLCLRLLSLHNALRRTALRLGCDILSGMSC KVYPSLGEDGKKRAALLMAVGQGLE XXXXXX  VVLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGA PDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRET+SIEDALR+YDSARVLRCAKLQGDSDFVAEQALKLGEDDW A GGD QASRNRPANKGMGDAEFVYNWEPLKLHHFPWQPK
Sbjct:  135 GHPMLCLRLLSLHNALRRTALRLGCDILSGMSCEKVYPSLGEDGKKRAALLMAVGQGLEEXXXXXX--VVLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGAGPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETTSIEDALRQYDSARVLRCAKLQGDSDFVAEQALKLGEDDWPAHGGDGQASRNRPANKGMGDAEFVYNWEPLKLHHFPWQPK 465          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A252E4S4_9NOSO (FAD_binding_3 domain-containing protein n=2 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A252E4S4_9NOSO)

HSP 1 Score: 109 bits (273), Expect = 2.240e-22
Identity = 88/260 (33.85%), Postives = 127/260 (48.85%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAV-ALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSARGGDEQASRNRPANKGMGDAEF---VYNWEPLKL 977
            V AD +IGADG+NSVVR  L  D  PR +  + +  +V +     LL S    F L +  KA +L+  GD   +W+  AL+ D    A  L+   +   R L+   G    +  ++ AT  +++  R I DRP  +S+  G         L+GDAAHP  P LGQGANMA EDA +L   L    SIE AL  Y+ +R+ R   +Q  S F   ++     + +  RG  EQA         M  +EF   +Y+++   L
Sbjct:  159 VQADLLIGADGINSVVRQMLIKDGSPRYSGRLSWRAVVKYNH--ELLGSDESIFMLGNDGKAFTLIDVGDGYIFWSAGALSAD----ANCLQNAVEVKSRVLEVFAGWGEPVQAIVAATDANEIVERPIYDRPPLESWSQGR------VTLLGDAAHPVVPVLGQGANMAFEDAWELQECLSHADSIETALASYEKSRIHRTQVIQARSAFQGARSYDADSETF-LRGVAEQAQ--------MSQSEFEDWLYSYKSTSL 397          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A6P0SRU9_9CYAN (FAD-dependent monooxygenase n=2 Tax=unclassified Moorena TaxID=2683338 RepID=A0A6P0SRU9_9CYAN)

HSP 1 Score: 109 bits (272), Expect = 2.700e-22
Identity = 82/260 (31.54%), Postives = 127/260 (48.85%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVA-LTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSARGGDEQASRNRPANKGMGDAEFVYNWEP-LKLHH 983
            V ADF+IGADG+NS +R  L  D KPR    + +  ++    C   L +     F+    +   L+  GD   YW    L+ D +    A     + + +   A +GE  +L  L+EATP  ++    I DR   KS+  G         L+GDAAHP  P+LGQGAN   EDA +LAL   + SSIE+AL  Y+  R+ R   +Q  S        K+G++       ++Q       ++   + ++V+N++P +K H+
Sbjct:  147 VSADFLIGADGINSAIREALIGDGKPRYLGSMSWRTVI---KCNQELLNPGELGFVKGNQEFMYLLNLGDDYIYWGYRKLSSDYVVSQDAAEVKSRVLNQL--ADWGE--SLRSLVEATPAERIFESPICDRLPLKSWSQGR------VTLLGDAAHPMSPALGQGANSTFEDAYELALCCSQASSIEEALARYEQRRIPRTKLMQTRSALA-----KMGDNATDREAANQQMQEQSQMSREEFE-DWVFNYKPEVKFHY 387          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: UPI002021DE62 (FAD-dependent monooxygenase n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI002021DE62)

HSP 1 Score: 105 bits (262), Expect = 6.440e-21
Identity = 83/259 (32.05%), Postives = 124/259 (47.88%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSARGGDEQASRNRPANKGMGDAEF---VYNWEPLKL 977
            V ADF+IGADGLNSVVR  L  D  PR    + +  ++   A   LL     T   S   K   L+       +W+    G   K++   +       R  K   G    + ++IEAT   Q+  R + DRP   S+  G         L+GDAAHP  PSLGQGAN A EDA +L+  L +  ++E AL  Y+++R+ R   +Q  S F  ++A+    + +  RG  EQ+         + + EF   +Y+++P K+
Sbjct:  159 VQADFLIGADGLNSVVRQTLIGDGLPRYVGRMSWRAVI--PAQHKLLPPDEVTLITSPEGKYMVLIDVSGGYIFWSA---GSRSKDSSMSQTATDAKARVFKEFAGWAEPVQEIIEATDCEQIVERPLCDRPPLASWSQGR------VTLLGDAAHPMVPSLGQGANTAFEDAYELSQSLSQAPNLETALTRYENSRIQRTQVIQARSAFQGDRAVSADSERY-LRGVAEQSK--------VSNDEFESWLYDYDPSKV 397          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A252CZN7_9NOSO (FAD_binding_3 domain-containing protein n=1 Tax=Nostoc sp. RF31YmG TaxID=1932668 RepID=A0A252CZN7_9NOSO)

HSP 1 Score: 105 bits (261), Expect = 8.390e-21
Identity = 76/211 (36.02%), Postives = 103/211 (48.82%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAV-ALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDF 839
            V AD +IGADG+NSVVR  L  D  PR    + + G+V +    +LL   V T   S   K  +L+  G    +W+  AL  D    A  L+   +   R  +   G    +  ++EAT  H +  R I DRP  +S+  G         L+GDAAHP  P+LGQGANMA EDA +L   L    SIE A   Y+ +R+     +Q  S F
Sbjct:  159 VQADLLIGADGINSVVRQTLIGDGSPRYAGRLSWRGVVQYTH-ELLLPDEV-TLMTSPYGKVFTLIDVGGGYIFWSAGALWAD----ANCLQSAAEVKSRVFEVFAGWAEPVQAIVEATDAHDIVERPIYDRPPLQSWSQGR------VTLLGDAAHPVVPALGQGANMAFEDAWELQECLSHAESIETAFTSYEKSRIHPTQVIQARSAF 357          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A7C9TSK8_9CYAN (NAD(P)-binding protein n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TSK8_9CYAN)

HSP 1 Score: 104 bits (260), Expect = 1.330e-20
Identity = 82/256 (32.03%), Postives = 125/256 (48.83%), Query Frame = 3
Query:  216 ADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAV-ALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQAL-----KLGEDDWSARGGDEQASRNRPANKGMGDAEFVYNWE 965
            ADF++GADG+NS VR  L  D  PR    + +  ++ ++    LLR+       +   K  +L+  G    +W+  AL+ D+     A     +  + F     G  + + ++IEAT    +  R I DRP   S+  G         L+GDAAHP  PSLGQGA+ A EDA  LAL +   SS+E A+  Y++AR+ R   +Q  S FV  ++      K  E+D+S       A R +  N+     E++Y +E
Sbjct:  165 ADFLVGADGINSAVRQILIGDGSPRYGGRMSWRAVIQYSH--ELLRANEVILMTAVEGKNIALIDVGGGYIFWSAGALSADDSSSGNAAAVKSRVSQEFA----GWASPVPEIIEATDAEAIVERPIWDRPPVSSWSQGR------VTLLGDAAHPMAPSLGQGASTAFEDARILALCIGSASSLESAIASYETARIERTKIIQARSAFVGLRSYDPDSEKYFEEDFSG-----VAERAKVGNEEF--EEWLYRYE 401          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A0C2MDA2_9CYAN (FAD_binding_3 domain-containing protein n=2 Tax=Scytonema TaxID=1203 RepID=A0A0C2MDA2_9CYAN)

HSP 1 Score: 103 bits (258), Expect = 1.660e-20
Identity = 86/256 (33.59%), Postives = 123/256 (48.05%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAV-ALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSA--RGGDEQASRNRPANKGMGDAEFVYNWEP 968
            V AD +IGADG+NSVVR  L  D  PR    + +  +V +     LL     TF +    K  +L+  G    +W+  AL+ D       L+   +   R L+   G    +  ++EAT  + +  R I DRP  +S+  G         L+GDAAHP  P LGQGAN A EDA +L   L    SIE AL  Y+++R+ R   +Q  S F   Q  +  + D  A  R   EQA  N+   +     E++YN++P
Sbjct:  141 VQADLLIGADGINSVVRQTLIGDGSPRYAGRLSWRAVVKYRH--ELLHPDESTFMIGSEGKNFTLIDVGGGYIFWSAGALSTDES----CLQSAAEVKSRVLEVFAGWAEPVQSILEATDANDIVERPIYDRPPLQSWNKGR------VTLLGDAAHPVVPVLGQGANTAFEDAWELGECLSHAPSIEAALTGYENSRIQRTQVIQVRSAF---QGARSYDPDAEAFVRSVIEQAQMNQSEFE-----EWLYNYKP 376          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A6P0R9X0_9CYAN (NAD(P)-binding protein n=1 Tax=Okeania sp. SIO3I5 TaxID=2607805 RepID=A0A6P0R9X0_9CYAN)

HSP 1 Score: 103 bits (256), Expect = 3.550e-20
Identity = 83/258 (32.17%), Postives = 125/258 (48.45%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYW-AVALTGDNIKEAMALRGDDQEMKRFLKAQFGE-CNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSARGGDEQASRNRPANKGMGDAEFVYNWEPLKL 977
            V  D V+GADG+ S VR  L  D +PR    + + G++ ++    LL +   T  ++ P K  +LM  GD    W A  L  D+     +  G   ++K  L  +FGE  + + ++IEAT    +  R I DRP   S+  G         L+GDAAHP  PS+GQGAN A ED  +L+  L +  ++E AL  YD  R+ R   +Q  S F   +A K          G++       +N+   D  ++Y +EPL +
Sbjct:  154 VEVDLVVGADGIKSAVRQILIGDGEPRYLGRMSWRGLIRYSH--ELLAANEATAMIAAP-KNVTLMDVGDGYISWGAKMLCVDD-----SSLGSAADIKSRLLKEFGEWASPVPEIIEATDAEIIVERPISDRPPLSSWSKGR------VTLLGDAAHPMSPSIGQGANTAFEDGYELSEYLAKAPNLEAALAIYDENRIERTQIIQARSAFSGNRAYKPD--------GEKYLQERLRSNEEFED--WLYKYEPLAI 387          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A2K1KTL8_PHYPA (FAD_binding_3 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KTL8_PHYPA)

HSP 1 Score: 102 bits (255), Expect = 6.310e-20
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 3
Query:  207 VVLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAAC--PILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVALTGDNIKEAMALRGDD-QEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLR 809
            +V A  VIGADG+ SV+R++   D  PRD     +  ++    C  P L   RV T   +   +   ++       YWA +LT +       +R    +E K+ L+ +F   +  + ++EAT P  +  RR+ D P    +  G        A++GDAAH   P+LGQGAN+A ED ++LA+ L   S +  AL+ Y+  R+ R
Sbjct:  185 LVKAPLVIGADGIRSVIRSKTFGDMTPRDNGRTMWRAVIDAKLCNHPAL---RVGTTTAAQNGRTIFVVNGVGDKLYWAYSLTDEATDGRAQVRSKTLEEAKQRLRQEFQGWDLALHILEATDPELILERRVLDLPVLTKWTFGR------VAVLGDAAHAVTPALGQGANLAFEDGLELAIQLSSASDLSSALKAYEHRRIPR 379          
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Match: A0A8J7B2G2_9CYAN (FAD-dependent monooxygenase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J7B2G2_9CYAN)

HSP 1 Score: 102 bits (253), Expect = 8.640e-20
Identity = 73/201 (36.32%), Postives = 102/201 (50.75%), Query Frame = 3
Query:  210 VLADFVIGADGLNSVVRARLGDDSKPRDTHCVWFFGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYW-AVALTGDNIKEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPATKSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETSSIEDALREYDSARVLR 809
            V  D +IGADG+NS+VR  L  D  P     V +  I+        L     T   S   K   L+  G   T+W A AL+ D+     A     + ++RF  A + E     ++I+ATP   +  R I DRP  + + +G         L+GDAAHP  PSLGQGANMA EDA +LA  L   S+I+ AL+ Y+++R+ R
Sbjct:  149 VETDLLIGADGINSIVRQNLIGDGSPNYAGRVSWRAILQFEHEQ--LAPNTSTLLTSADGKNFLLVDVGGGYTFWSASALSADDFVHQRATASKTRVLERF--ADWAE--PAGEIIKATPTDHIVERPICDRPPLRHWSNGG------VVLLGDAAHPVVPSLGQGANMAFEDACELAACLAAASNIKTALKSYENSRLPR 337          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig673.17637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G765_ECTSI1.620e-22797.00Flavoprotein Monooxygenase n=2 Tax=Ectocarpus TaxI... [more]
A0A252E4S4_9NOSO2.240e-2233.85FAD_binding_3 domain-containing protein n=2 Tax=un... [more]
A0A6P0SRU9_9CYAN2.700e-2231.54FAD-dependent monooxygenase n=2 Tax=unclassified M... [more]
UPI002021DE626.440e-2132.05FAD-dependent monooxygenase n=1 Tax=Chroococcidiop... [more]
A0A252CZN7_9NOSO8.390e-2136.02FAD_binding_3 domain-containing protein n=1 Tax=No... [more]
A0A7C9TSK8_9CYAN1.330e-2032.03NAD(P)-binding protein n=1 Tax=Oscillatoria sp. SI... [more]
A0A0C2MDA2_9CYAN1.660e-2033.59FAD_binding_3 domain-containing protein n=2 Tax=Sc... [more]
A0A6P0R9X0_9CYAN3.550e-2032.17NAD(P)-binding protein n=1 Tax=Okeania sp. SIO3I5 ... [more]
A0A2K1KTL8_PHYPA6.310e-2031.86FAD_binding_3 domain-containing protein n=2 Tax=Ph... [more]
A0A8J7B2G2_9CYAN8.640e-2036.32FAD-dependent monooxygenase n=5 Tax=Cyanobacteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig673contigEcto-sp13_S_contig673:19805..22804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score634.0
Seed ortholog evalue3.8e-179
Seed eggNOG ortholog2880.D7G765
Model size1595
KEGG rclassRC00046,RC00389
KEGG koko:K00480,ko:K00486
KEGG ReactionR00818,R01960,R05632,R06915,R06936,R06939
KEGG Pathwayko00380,ko00621,ko00624,ko00626,ko01100,ko01120,ko01220,map00380,map00621,map00624,map00626,map01100,map01120,map01220
KEGG ModuleM00038
Hectar predicted targeting categorymitochondrion
Exons5
EggNOG free text desc.FAD binding
EggNOG OGsCOG0654@1,KOG2614@2759
Ec32 ortholog descriptionFlavoprotein Monooxygenase
Ec32 orthologEc-01_010880.1
EC1.14.13.1,1.14.13.9
Cds size993
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig673.17637.1prot_Ecto-sp13_S_contig673.17637.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig673 20396..22793 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463925.9342415-UTR-Ecto-sp13_S_contig673:19804..203951681463925.9342415-UTR-Ecto-sp13_S_contig673:19804..20395Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig673 19805..20395 -
1681463926.0316765-UTR-Ecto-sp13_S_contig673:22793..228041681463926.0316765-UTR-Ecto-sp13_S_contig673:22793..22804Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig673 22794..22804 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463925.9497538-CDS-Ecto-sp13_S_contig673:20395..206351681463925.9497538-CDS-Ecto-sp13_S_contig673:20395..20635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 20396..20635 -
1681463925.959443-CDS-Ecto-sp13_S_contig673:20931..210991681463925.959443-CDS-Ecto-sp13_S_contig673:20931..21099Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 20932..21099 -
1681463925.9691987-CDS-Ecto-sp13_S_contig673:21420..215521681463925.9691987-CDS-Ecto-sp13_S_contig673:21420..21552Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 21421..21552 -
1681463925.9795806-CDS-Ecto-sp13_S_contig673:21844..220351681463925.9795806-CDS-Ecto-sp13_S_contig673:21844..22035Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 21845..22035 -
1681463926.015226-CDS-Ecto-sp13_S_contig673:22531..227931681463926.015226-CDS-Ecto-sp13_S_contig673:22531..22793Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig673 22532..22793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig673.17637.1

>prot_Ecto-sp13_S_contig673.17637.1 ID=prot_Ecto-sp13_S_contig673.17637.1|Name=mRNA_Ecto-sp13_S_contig673.17637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
MLCLRLLSLHNALRRTALRLGCDILSGMSCNKVYPSLGEDGKKRAALLMA
VGQGLEEEEEEEEEEVVLADFVIGADGLNSVVRARLGDDSKPRDTHCVWF
FGIVGHAACPILLRSRVHTFFLSDPTKAASLMPCGDHNTYWAVALTGDNI
KEAMALRGDDQEMKRFLKAQFGECNALVKLIEATPPHQVHRRRIEDRPAT
KSFVSGADPDEFYSALVGDAAHPTRPSLGQGANMALEDAVQLALVLRETS
SIEDALREYDSARVLRCAKLQGDSDFVAEQALKLGEDDWSARGGDEQASR
NRPANKGMGDAEFVYNWEPLKLHHFPWQPK*
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mRNA from alignment at Ecto-sp13_S_contig673:19805..22804-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig673.17637.1 ID=mRNA_Ecto-sp13_S_contig673.17637.1|Name=mRNA_Ecto-sp13_S_contig673.17637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3000bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:19805..22804- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGGGCACCCTATGCTCTGCCTTCGTCTCCTGAGCCTCCACAACGCGCTC CGCCGGACTGCCCTGCGCCTGGGCTGCGATATCCTGTCCGGTATGTCCTG TAACAAGGTCTACCCATCCCTGGGGGAGGATGGGAAGAAGCGGGCGGCGT TGCTCATGGCCGTTGGGCAGGGACTGGAGGAGGAGGAGGAGGAGGAGGAG GAGGAGGTGGTATTGGCCGACTTTGTCATCGGTGCTGATGGTTTGAACAG CGTCGTTCGAGCGCGCCTTGGGGGTGAGCGAGGAGCGAATGCGTGCACCG TTGGGGGTTGACCGTCTTACTGAGAGATTGCGTGGTACTGCTGTACAATG TGTGATGCTAGCCGTGTGACGTGTGGCGTGTCGTTCGCAGTTTTCGTTCC TTTCATGACATTCGTCATGCATCACATAAATCCGCAAACTGGCCTCTCAG TGAGTTTCCAAGCAAGTGTTCCCCAGGTAGGTGGAAATGCGCCATGACGA ATGCGCATGGTCTTGTTATCTTGACAATCTTGACGATCTTGACACTCGAA ACGGCATGTATGTGCCAGTCAGGAGAAAAAAAAAGGCCCATGCGGCTTCC CCTTTTCATCGACATGCAACGTGGTGACCACTGGAAGCAAGCGAAGCGAG CTATAATACAATACCATGCTCATATCACTCGCGACAACCATCGTCTTCGA GCCGCAACCAATCTCTTCCTTTACGTGACCCCTCTGCCCTCCACACAACT CTCCATATTATTGGCGCAGACGATTCGAAGCCGCGCGACACGCACTGCGT GTGGTTTTTCGGGATCGTGGGGCACGCGGCGTGCCCGATACTGCTGCGTA GCCGAGTGCACACGTTTTTCCTCAGCGACCCGACCAAGGCGGCAAGCTTG ATGCCGTGTGGCGACCACAATACCTACTGGGCGGTGGCGCTCACGGGTGA CAACATCAAGGTGTGTGTGTATGTGTGTGTGTTTTTTTTTGTTTGTAACG GACTCTTTATGCTCACCGCGATGAGACTGCGGTATGCGTACAGTAGTAGA CGACGCCCGTGAGCCGGTGTCGAATTTCAACGAAAACGTTGAGGTCTCCC AAGAGGTTGGGTTGGTCATGAGGGGTGATCCACGATAAACCGCGCCGCGC AGAGCAGGACGGTATTTCCATTTGTTGCCCTTGGTGTGAACCTCGGTGCC TCGTTTGTTTTGTCAGCCTCTGTCCCTCCTGTAAAATATTGGCAATCGTC AGGAGGCTATGGCGTTGAGGGGTGATGATCAGGAGATGAAACGCTTCCTG AAGGCTCAATTTGGAGAGTGCAACGCGCTGGTGAAACTCATCGAAGCAAC ACCCCCACACCAGGTCCATCGGCGACGTATCGAGGTGAGCGAAGCAGTGC GTTGAGGCCAAGCGACTAGGGTAGGGTAGCATCTTGCTTCTCTTCGGCTA CGACGAGGCTAGTTTCGACGCAGCAAGCCATTTCGACGGGTGGGACTTCT TGGGTGCTGTGCCCACAAACCCATTTTCTCGTCGTGCGCTGTCACCCCGA AAGAGACCCGACCTTTTGCAAGACATATCTGGTTCACTACACTTTGCTGG GATGGTGTATATTCTGTATCGGGTCGTCCAACCCGGCGTACAAGCGCGCC ACCTCAGTAATGCGTCCTTCTTGTCTATGCAAAATTGTCCGCTCAACTAC CCTAGGATCGTCCAGCGACGAAGTCGTTCGTGTCAGGCGCCGATCCAGAT GAGTTCTATTCCGCCTTAGTCGGCGACGCAGCACACCCGACGCGGCCGTC TCTGGGTCAGGGAGCCAACATGGCGCTCGAGGACGCGGTGCAGCTGGCCT TGGTACTGCGGGAGACGTCGTCGGTGCGTCGTTTTGCGGACAGTCCATAG ACGTGTATCGGCATTTCATGCGCAAGGCTACTACAAAGATCGTTGTCTTT TTGCAGTGCTAGTACTCAGGGACGAGATTGTACCTCTTCTGTTTTGCTGG CTTGTCGACGCATTTATGGTGTATGCCCTACTGCTGTAAACCGCTGCTAC CTGCCAGACTTTGGGTGCGCCAGGCACGGGCCAGGTTTCTCCTAGCCCGT GCTTGCTCCCCCAGCGCTGCCTCCAAAGCCCGTCGGGATCCCGATCGCCT TTTCGCGCACGCATGACAGATAGAAGACGCTCTGAGAGAGTACGACTCCG CGCGGGTACTCCGCTGCGCCAAGCTCCAGGGAGACTCCGACTTCGTGGCC GAGCAAGCCCTGAAGCTCGGCGAAGATGATTGGTCCGCCCGCGGGGGTGA CGAGCAGGCGAGCCGGAACAGGCCTGCCAATAAGGGCATGGGCGATGCCG AGTTTGTCTATAACTGGGAACCGTTGAAATTGCATCATTTCCCTTGGCAA CCGAAGTAGACCCCGTGTAGTGCTCCTTGCATTGTTTGGATTCAAGATAT ACGATAGTTTAAGCGAGGTGTGCTGTTGTGTGTTGCGCGGTTGTAGCTTT CTTTTTGTAGAGTGCCCACATCGATTGTTGTTAGATAAACCGGGCTTGAG GCAGTGCGTGACACGTGAGCGGCGCCCCTGTTTTCTGCATATTTTTTCGT TGTCACGACGAACGCAGTGGGGAGAGGTTAGGAAGAGGTCGTGGGTGAAC TCTGGTTTGTAAGTACTCCTCTCTGTGAGCTCTGTGAGAGGCGTGAGTAG ATGGTGTCACGGGCAGTGTGAGCGTTTTCGGCGAGAGAGACTAGAAAAAC GCGTAGATATGTGATTGTGTGCGCCGAAGGGAGGGAACAGAGAAGGTCCT TCCTGTGTGCATGCTGTTGTTCATTGGGCAGAGTCCCCTTTGCGATGGTG ATTGCGGCAAGTTCTTGGTCCATTTTGATGATGCGCCGGGGATGCTGCGA ATGACGTTGGTGTTGTGGTTGTACAACCAGGTGGATCTCTCTGTTTAGAT ACAGCATGATCTGTCTTTGAGACAACTTGATAAATTAATAAACTTCTCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig673:19805..22804-

>mRNA_Ecto-sp13_S_contig673.17637.1 ID=mRNA_Ecto-sp13_S_contig673.17637.1|Name=mRNA_Ecto-sp13_S_contig673.17637.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig673:19805..22804- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCTGCCTTCGTCTCCTGAGCCTCCACAACGCGCTCCGCCGGACTGC
CCTGCGCCTGGGCTGCGATATCCTGTCCGGTATGTCCTGTAACAAGGTCT
ACCCATCCCTGGGGGAGGATGGGAAGAAGCGGGCGGCGTTGCTCATGGCC
GTTGGGCAGGGACTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGT
ATTGGCCGACTTTGTCATCGGTGCTGATGGTTTGAACAGCGTCGTTCGAG
CGCGCCTTGGGGACGATTCGAAGCCGCGCGACACGCACTGCGTGTGGTTT
TTCGGGATCGTGGGGCACGCGGCGTGCCCGATACTGCTGCGTAGCCGAGT
GCACACGTTTTTCCTCAGCGACCCGACCAAGGCGGCAAGCTTGATGCCGT
GTGGCGACCACAATACCTACTGGGCGGTGGCGCTCACGGGTGACAACATC
AAGGAGGCTATGGCGTTGAGGGGTGATGATCAGGAGATGAAACGCTTCCT
GAAGGCTCAATTTGGAGAGTGCAACGCGCTGGTGAAACTCATCGAAGCAA
CACCCCCACACCAGGTCCATCGGCGACGTATCGAGGATCGTCCAGCGACG
AAGTCGTTCGTGTCAGGCGCCGATCCAGATGAGTTCTATTCCGCCTTAGT
CGGCGACGCAGCACACCCGACGCGGCCGTCTCTGGGTCAGGGAGCCAACA
TGGCGCTCGAGGACGCGGTGCAGCTGGCCTTGGTACTGCGGGAGACGTCG
TCGATAGAAGACGCTCTGAGAGAGTACGACTCCGCGCGGGTACTCCGCTG
CGCCAAGCTCCAGGGAGACTCCGACTTCGTGGCCGAGCAAGCCCTGAAGC
TCGGCGAAGATGATTGGTCCGCCCGCGGGGGTGACGAGCAGGCGAGCCGG
AACAGGCCTGCCAATAAGGGCATGGGCGATGCCGAGTTTGTCTATAACTG
GGAACCGTTGAAATTGCATCATTTCCCTTGGCAACCGAAGTAG
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