prot_Ecto-sp13_S_contig673.17635.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig673.17635.1
Unique Nameprot_Ecto-sp13_S_contig673.17635.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length143
Homology
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: D7G767_ECTSI (Selenoprotein T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G767_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 2.520e-91
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVRST 142
            MRRNFEELRSFLHAHYPALAKAQSIRGELYP PPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVRST
Sbjct:  166 MRRNFEELRSFLHAHYPALAKAQSIRGELYPPPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVRST 307          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A7S2D3C0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3C0_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.880e-26
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSV 139
            M+RNF ELR+FL   YP L     I GE YP PP A    +     Q+GG+  ++FGS IF+ LG+P P +   ++ N M    G+   NS   SL  TGAFEV +DGE+V+S+L   G+ P G  L+   E++G+  V
Sbjct:    1 MKRNFVELRNFLAHRYPELQG--KIAGENYPPPPYANLAVSAAGTVQMGGIVLMMFGSQIFNTLGMPEPEWYKELQENKMMAFCGVFFMNSMANSLTTTGAFEVLLDGEVVYSKLE-TGRMPNGRQLIELMEQKGIEMV 136          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A835Z5V2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.060e-24
Identity = 63/140 (45.00%), Postives = 78/140 (55.71%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVR 140
            M+ NF ELR FL   YP L     + G+ YP P  AQ  A+L    Q+ G  S+L G L+F  LG+  P     ++ +    I GL V NS   + LATGAFEV IDGEL  SRLA  GQFP  A +LR F + GL  V+
Sbjct:    1 MKGNFLELRKFLEFTYPELRGR--VAGQHYPPPQWAQTAASLAQVLQLAGTISILAGGLVFGALGMEPPGAFAAVQEHKWPVIGGLFVLNSMANAALATGAFEVFIDGELALSRLA-TGQFPGRADILRAFAQHGLVPVQ 137          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A6S9L5H0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9L5H0_HETAK)

HSP 1 Score: 93.6 bits (231), Expect = 1.250e-21
Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAP-FFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFP 122
            M+RNF EL+ FL   YP L    +++G  YP PP A ALA LG+ A  GG+A    G  +F  +G+ AP  +   M+ NPM  + GL   N+  G    TGAFEV ++GE VFS+L   G+FP
Sbjct:    1 MQRNFIELQKFLEYSYPELVG--NVQGTFYPPPPFALALANLGTLALWGGIALTFLGETLFRAVGLAAPPGWFQSMKANPMPVVGGLFALNAVAGGFAKTGAFEVYLNGETVFSKLES-GRFP 120          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A7S2PKB4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKB4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.440e-16
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRL----GVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGL 136
            M RN+ +LR FL  ++P L    +I G  YP P  A  L+ L    Q+  +A+V  G  I+  +    G P P + P ++ NPM  +  L + NS   S+  TGAFEV +DG +VFS+L   G+ P+G  +L+ F+  GL
Sbjct:    1 MSRNYVQLRQFLEQNFPELEG--NIHGSNYPPPEFAVYLSQLIGILQIFAMAAVFMGDAIWQFVPFMNGQP-PGWWPQVKENPMLVVCTLFMGNSIANSMTTTGAFEVLLDGVVVFSKLE-TGRMPSGPEILQVFKGAGL 136          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: F0YLT9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLT9_AURAN)

HSP 1 Score: 78.6 bits (192), Expect = 1.850e-15
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    3 RNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRG 135
            RN+ ELR FL   YP L   +S+  E YP P +    A     AQV  VA +L G  +F   G   P +   +  N M     + +AN+    ++ATGAFE+ ++GEL FS+L   G+ P+ A ++R  ++ G
Sbjct:   36 RNYLELRKFLEDAYPGL---RSVAAEQYPPPAVGVFAAQAAGMAQVACVALLLGGEKVFQLFGAATPGWYHSVAENKMMAFGAVWMANNVAAQMVATGAFEIHVNGELAFSKLE-TGRLPSAADVVRGMKRAG 164          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A7S1ZVC8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZVC8_TRICV)

HSP 1 Score: 76.6 bits (187), Expect = 4.230e-15
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRL----GVPAPFFVPVMRRNPMATIVG-LTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSV 139
            M RNF ELR +L   YP L     I GE YP PP A A A   S AQV  +A+V  G  +++ +    G P  +F   M+ N    ++G   V  +     + TGAFE+ +DG++VFS+L   G+FP G  ++      G+++V
Sbjct:    1 MARNFMELRKYLEGSYPELRGR--ITGENYPIPPAAAAFANFVSIAQVFLMATVFMGDAVWNYVPFFSGPPDWYFA--MKENSAVVVIGAFLVVPTIAQKYVTTGAFEIILDGQVVFSKLE-LGRFPNGNDIMEIMTNAGMKAV 139          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A7S2V5G7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.000e-14
Identity = 39/115 (33.91%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRL 115
            M++NFEE++ FL   YP L    SI G+ YP P   + ++ +GS   +  +  ++ GS +F ++G+P P ++   + N M   +G+   N    ++  TGAFEV +D +L+FS+L
Sbjct:  143 MKKNFEEMQQFLEYRYPQLVG--SIHGQNYPLPFHIKVISKIGSSLHLLSLVFLMGGSFVFQKMGIPEPSWLDWAKNNRMQVFIGIFGINYVTSNMAKTGAFEVFLDDDLIFSKL 255          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A7S2XS90_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS90_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.210e-14
Identity = 49/145 (33.79%), Postives = 80/145 (55.17%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRL----GVPAPFFVPVMRRNPMATIVGL-TVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVR 140
            M RNF +L+ FL  H+P LA   +I+G  YP+P  A   +    + QV  + +V  G  I++ +    G P+ ++   M++N     +G+  +  S   S + TGAFEV +DG +++S+LA  G+ P G  LL+   + GLR V+
Sbjct:    1 MSRNFHQLKEFLEQHFPELANG-AIKGANYPAPAWATIASQAIMFMQVFTMMAVFTGDAIWNYIPFVQGAPSWYYS--MKQNSAVVFIGIFLIIPSVIQSYITTGAFEVMLDGAVIYSKLA-TGRMPNGNDLLKPLIQAGLRDVK 141          
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Match: A0A7S1BN41_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN41_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.650e-14
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    1 MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGGVASVLFGSLIFDRL----GVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATGAFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSV 139
            MRRNF ELR FL  +YP +   ++I G   P P  A   A +    Q+  VA   FG  +++ +    G P P++  ++  N +A +  L   NS   S L+TGAFE+ +DG+++FS++   G+ P G  +++  E  G   +
Sbjct:    1 MRRNFLELRRFLLQNYPHVFSEENISGGTQPPPSNAMYFAQVTGTLQLIAVAFAFFGDSLWNIVPIWGGRPPPWW-GIVLENKVAVMCFLFCVNSMANSQLSTGAFEIDMDGKIIFSKMEA-GRMPNGDDIVKALEGMGYSPI 141          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig673.17635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G767_ECTSI2.520e-9199.30Selenoprotein T n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A7S2D3C0_9STRA1.880e-2641.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835Z5V2_9STRA1.060e-2445.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9L5H0_HETAK1.250e-2143.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2PKB4_9STRA3.440e-1637.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
F0YLT9_AURAN1.850e-1535.34Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1ZVC8_TRICV4.230e-1536.11Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2V5G7_9STRA1.000e-1433.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2XS90_9STRA1.210e-1433.79Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1BN41_9STRA3.650e-1432.87Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 81..135
e-value: 1.2E-6
score: 30.4
IPR011893Selenoprotein, Rdx-typePFAMPF10262Rdxcoord: 3..129
e-value: 5.2E-6
score: 26.6
IPR011893Selenoprotein, Rdx-typeTIGRFAMTIGR02174TIGR02174coord: 2..128
e-value: 1.6E-9
score: 35.9
IPR019389Selenoprotein TPANTHERPTHR13544SELENOPROTEIN Tcoord: 1..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig673contigEcto-sp13_S_contig673:10091..10519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig673.17635.1mRNA_Ecto-sp13_S_contig673.17635.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig673 9862..11041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig673.17635.1 ID=prot_Ecto-sp13_S_contig673.17635.1|Name=mRNA_Ecto-sp13_S_contig673.17635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp
MRRNFEELRSFLHAHYPALAKAQSIRGELYPSPPMAQALATLGSYAQVGG
VASVLFGSLIFDRLGVPAPFFVPVMRRNPMATIVGLTVANSFCGSLLATG
AFEVSIDGELVFSRLAGEGQFPTGALLLREFEKRGLRSVRST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011893Selenoprotein_Rdx-typ
IPR019389Selenoprotein_T