mRNA_Ecto-sp13_S_contig6726.17626.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6726.17626.1
Unique NamemRNA_Ecto-sp13_S_contig6726.17626.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: D8LUC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC0_ECTSI)

HSP 1 Score: 696 bits (1796), Expect = 5.100e-251
Identity = 376/391 (96.16%), Postives = 379/391 (96.93%), Query Frame = 3
Query:  120 MTTATFASGDMSLDDEFRTDPFFSPETAGAAHPSTAVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGVHGLFCSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPSLLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXELMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKNERLQREREEYEGLTPEQKRRRDLRDEKKAKKVASSKRHKAR 1292
            MTTATF SGDMSLDDEFRT+PFFSPETAGA HPSTAVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYV VYI GRRRN HIAHGFI+GVHGLFCSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFF+PAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPSLLPPSLVCLSESSALLEPMLPXXXXXXXXXXX   ELMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARG DGS GATEMMELALSYIQLLNKFKMSA TKKKALERRAAVLKRKSAITHAQRQERFQMLKNERLQREREEYEGLTPEQKRRRDLRDEKKAKKVASSKRHK R
Sbjct:    1 MTTATFVSGDMSLDDEFRTNPFFSPETAGAGHPSTAVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYVAVYIAGRRRNYHIAHGFIMGVHGLFCSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFSPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPSLLPPSLVCLSESSALLEPMLPXXXXXXXXXXXNLLELMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGGDGSDGATEMMELALSYIQLLNKFKMSAGTKKKALERRAAVLKRKSAITHAQRQERFQMLKNERLQREREEYEGLTPEQKRRRDLRDEKKAKKVASSKRHKMR 391          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: A0A1Y1HVC4_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVC4_KLENI)

HSP 1 Score: 103 bits (257), Expect = 2.580e-20
Identity = 99/339 (29.20%), Postives = 147/339 (43.36%), Query Frame = 3
Query:  138 ASGDMSLDDEFRTDPFFSPETAGAAHPST-----AVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGVHG---LFCSRF--LEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAP--SLLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXE------LMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRA 1100
            A+G     DE+  D F   E    A P T     +  +  K   A + S    K   +    E +G  LLLGY+  Y +G +RN   A  F         +F   F  L  G ASE      R L+ ++  +TF +YA+G R C  +  T+ L +R DL M   S   PA  DR+  EV  ++ED+EP IFA+ARKR  K +++    L+++A +  AP    L   L  ++ES  L+  +LP                      M+ TD    P        KK L + F LP       D     T ++ +   YI L+ + +++   + KA ERR+
Sbjct:  107 AAGAKRRQDEWDEDEFEGVEAMENAQPVTKPSGQSKGTPKKQKTAPVTSSSGPKTYYY----EAVGVVLLLGYLANYYLGGKRNEKFARDFAAEFADPGKIFHKNFTLLGVGTASE----GDRALMTKEGQATFKFYASGRRFCHSLLATMQLRARQDLVMSAISAVQPA-ADRIRFEVYMNEEDMEPFIFALARKRTAKVMVKNEKDLREFAAIVDAPRPKRLAEELTIIAESKDLIGDLLPEVVLDQALGDKAFATHGRYFVSMHFTDNAPPPW-------KKALSFVFNLPPA-----DKMEDLTRLVAMIPFYIDLVGRLRLTPQQRAKAEERRS 424          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: B8LPZ1_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LPZ1_PICSI)

HSP 1 Score: 100 bits (250), Expect = 2.160e-19
Identity = 84/304 (27.63%), Postives = 138/304 (45.39%), Query Frame = 3
Query:  306 VEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGV---HGLFCSRF--LEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPS---LLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXEL------MYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKNER 1175
            +E+     L+ + V Y  GRR+N  IA  +        G+F   F  L  G  ++ P      LL ++  + F +YA+G R C G+  T++L SRHDL   +++F  P   D V +EV  +++ ++ V+FA+ARK+  K + ++   LQ YA +   PS    L   LV ++ES  +   ++               +       ++ TDQ          + +K+LR+ F LP  S          T ++ +   YI L+ ++K+S   + KA   R  V +      H  RQE  Q  K ER
Sbjct:  169 IEFFCVTFLIAFAVNYFFGRRQNEQIALAWAAQFATKDGIFEKNFSLLGTGDGNDTP------LLLKEGQNVFKFYASGRRYCQGLLATMELQSRHDLISRMYNFIVPCK-DEVNIEVYMNEDGMDAVVFALARKKAAKGMHKDTRDLQQYASLLTPPSNRKWLSEELVAIAESREVALDLVTDTVLDQVFGEKSFGKYGKGLISLHFTDQYPSG------SHRKMLRFKFALPSAS-----NMADMTRLIAIVPYYIDLVGRYKLSTQARAKADSARTKVNQELYKEQHIARQEAIQRRKEER 454          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: B9SSM7_RICCO (Uncharacterized protein n=1 Tax=Ricinus communis TaxID=3988 RepID=B9SSM7_RICCO)

HSP 1 Score: 100 bits (249), Expect = 2.490e-19
Identity = 95/366 (25.96%), Postives = 161/366 (43.99%), Query Frame = 3
Query:  123 TTATFASGDMSLDDEFRTDPFFS--PETAGAAHPSTAVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGV---HGLFCSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAP----SLLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXE------LMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKNER 1175
            TT TF   D   +DEF   P     PET     P+T    D   S   + S    K++ ++  +E +  + L+ +++ Y  G+R N +IA  +         +F   F   G   +    D   LL ++  + F +YA+G R C G+  TI+L SRHDL   +++   P   D ++ EV  +D+ ++ V+FAVA+K+  K + +E+  LQ +AG+   P      +P  L  ++ES  +   ++               +       M+ +DQ+         T KK+L + F LP       +     T ++ L   YI L+ ++K+S+  + K    R+   +         RQE  Q  K ER
Sbjct:   88 TTTTFDYWD---EDEFEGLPINQSPPETPKVTEPAT----DKNQSADPIVSQIATKKQSYM--IEIVCISFLICFIINYFTGKRENENIALSWAAKFATKDSIFEKNFSLLGVGDK----DDSPLLLKEGQNVFKFYASGRRYCQGLLATIELKSRHDLISRVYNMIVPCK-DEISFEVYMNDDAMDHVVFAVAKKKAAKGMQKEIRDLQRFAGIVAQPPSGRKWVPDELAVITESKEVASDLITEAVLEQVFGEKAFEKHGKGFISMHFSDQHPG-------THKKMLLFKFALP-----DANNMTDMTRLVALVPYYIDLIGRYKLSSQARSKTDAARSKAAQEAYKELQNARQEALQRKKAER 427          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: A0A078H6T0_BRANA ((rape) hypothetical protein n=11 Tax=Brassiceae TaxID=981071 RepID=A0A078H6T0_BRANA)

HSP 1 Score: 96.7 bits (239), Expect = 4.960e-18
Identity = 76/276 (27.54%), Postives = 134/276 (48.55%), Query Frame = 3
Query:  282 KQELHLTAVEYLGFALLLGYVVVYIVGRRRNSHIAHGFI--IGVHGLFCSR---FLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPS---LLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXEL-MYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKK 1082
            K+++    VE +  ++L+ Y++ Y  G+R N ++A  +    G+      +   FL  G   + P      LL +++ + F +YA+G R C GV  T++L SRHDL   L++   P   D ++ EV  ++E ++ V+FAVARK+  K + +E+  LQ + GV  AP     +   L  +SES  +   M+               +   Y    +    L  +H  +K+L + F LP   A+ +D  V    ++ L   YI L+ ++K+S+  + K
Sbjct:  136 KKKISSYTVEIVSVSILIAYLINYFTGKRENENLALSWATKFGLKDSIFEKNFSFLGVGEGEDSP------LLLKEATNVFKFYASGRRFCHGVLATMELKSRHDLISRLYNCVVPCK-DEISFEVYMNEEAMDHVVFAVARKKMAKMMHKELRDLQRFGGVVAAPGGRKWVAEELAVISESKEVAGDMITDVVLDQVFGDKSFEKFGKYFISMHFSDQLPGKH--RKMLLFKFALP--DAKHMDDMV---RLVALIPYYIDLIGRYKLSSQARNK 397          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: A0A484MK75_9ASTE (Uncharacterized protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MK75_9ASTE)

HSP 1 Score: 96.7 bits (239), Expect = 5.780e-18
Identity = 80/276 (28.99%), Postives = 130/276 (47.10%), Query Frame = 3
Query:  306 VEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGV---HGLFCSRF--LEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPS-----LLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXEL------MYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKA 1085
            VE +  + L+ +V+ Y  G+R N +IA  +         +F   F  L  G   + P      LL ++  + F +YA+G R C G+  T++L SRHDL   L++   P   D +T EV  +D+ ++ V+FAVARK+  K + +EV  LQ YAGV   P+      +   LV +SES  +   ++               +       M+ +DQ+    +G     KK+L + F LP       +     T ++ L   YI L+ K+K+S+  + KA
Sbjct:  172 VEIVCVSFLIVFVINYFAGKRENENIALAWATKFATKDSIFEKNFSLLGVGETDDSP------LLLKEGQNVFKFYASGRRYCQGLLATMELKSRHDLISKLYNMVVPCK-DEITFEVYMNDDAMDHVVFAVARKKLAKTMQKEVRDLQRYAGVVAPPAGGGRKWVADELVVVSESKEVAGDLITEVVLEQVFGEKALEKFREGFISMHFSDQH----IGSH---KKMLVFKFALPKA-----NDMADMTRLIALVPYYIDLIGKYKLSSHARSKA 428          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: A0A1R3HXZ0_COCAP (Uncharacterized protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3HXZ0_COCAP)

HSP 1 Score: 96.3 bits (238), Expect = 6.830e-18
Identity = 97/365 (26.58%), Postives = 157/365 (43.01%), Query Frame = 3
Query:  123 TTATFASGDMSLDDEFRTDPFFSPETAGAAHPSTAVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYVVVYIVGRRRNSHIAHGFI--IGVHG-LFCSRF--LEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPS---LLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXEL------MYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKNER 1175
            +T TF   D   +DEF   P   P         TA  ++   +       Q A        VE +  + L+ +++ Y  G+R N ++A  +       G +F   F  L  G   + P      LL ++  + F +YA+G R C G+  T++L SRHDL   L++   P   D ++ EV  +DE ++ VIFAVA+K+  K + +E+  LQ +AG+  APS    +   L  +SES  +   ++               +       M+ +DQ+         T KK+L + F LP       +     T ++ L   YI L+ ++K+S+  + K    RA   +         RQE  Q  K ER
Sbjct:   92 STTTFEYWD---EDEFEGLPVEQPPPEPPKVTETATPNESDPTTTS--KPQTAPASKKSFTVEIVCGSFLIAFLINYFTGKRENENLALAWAAKFATKGSIFEKNFSLLGVGEGDDSP------LLLKEGQTVFKFYASGRRYCQGLLATMELKSRHDLISRLFNMVVPCK-DEISFEVYMNDESMDQVIFAVAKKKAAKGMQKEIRDLQRFAGLVAAPSGRKWVAEELSVISESKEVAGDLITEAVLEQVFGDKAFEKYGKDFISMHFSDQHPG-------THKKMLLFKFALP-----DANNMADMTRLVALVPYYIDLIGRYKLSSQARSKTEAARAKAAQEAYKELQNARQEALQRKKMER 432          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: A0A2P6PCU7_ROSCH (Uncharacterized protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PCU7_ROSCH)

HSP 1 Score: 96.3 bits (238), Expect = 7.050e-18
Identity = 79/304 (25.99%), Postives = 136/304 (44.74%), Query Frame = 3
Query:  306 VEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGV---HGLFCSRF--LEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPS---LLPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXEL------MYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKNER 1175
            VE      L+ +++ Y  G+R N ++A  +         +F   F  L  G   + P      LL ++  + F +YA+G R C G+  T++L SRHDL   +++   P   D ++ EV  +D+ ++ V+FAVA+K+  K + +EVP LQ +A +   P+    +   L  +SES  +   ++               +       M+ +DQ+  P      T KK+L + + LP       D     T ++ L   YI L+ ++K+S+  + K    R+   +         RQE  Q  K ER
Sbjct:  152 VEIACGGFLIVFIINYFTGKRMNENLALAWAAKFATKDTIFDKNFSLLGVGEGDDSP------LLLKEGQNVFKFYASGRRCCQGLLATMELKSRHDLISSIFNLVVPISRDEISFEVYMNDDAMDHVVFAVAKKKAAKAMQKEVPDLQKFATILSPPAGRKWVAEDLAVISESKEVAGDLITEAVLDQVFGEKAFQKFGKGFMYMHFSDQHPGP------THKKMLLFKYALP-----DADSMADMTRLVALIPYYIDLIGRYKLSSQARSKTEATRSKAAQEAYKELQNARQEALQRKKAER 438          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: A0A176WFX9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WFX9_MARPO)

HSP 1 Score: 95.1 bits (235), Expect = 1.970e-17
Identity = 73/280 (26.07%), Postives = 127/280 (45.36%), Query Frame = 3
Query:  306 VEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGV---HGLFCSRF--LEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPSL--LPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXEL------MYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAV 1106
            +E +    L+ Y+ VY VGR+RN  +A  +        G+F   F  L  G   + P      LL ++  + F +YA+G R C G+  T+D  SRHDL  ++W   +P   D +TV+V  +++ ++ ++FAVAR++  K + +E   L  YA +    +   L   L  +SES  +   ++               +       M+ TDQ+           +KVL++ F +P       D     + ++     +I  + ++K+S  T+ KA   RA V
Sbjct:  184 IEAVSILFLIAYITVYFVGRKRNEKLALAWAAQFACKDGVFDKNFSLLGTGDGVDSP------LLMKEGQNVFKFYASGRRYCEGLLATMDFQSRHDLIALIWYMISPRK-DEMTVDVFMNEDSMDSLVFAVARRKNAKTMHKERADLLQYASIINVTNRKWLSEELTAISESREVATDLMTDALLEQVFGEKAFEKFASHFISMHFTDQSPYG------AHRKVLQFKFTIP-----SEDRMAEMSRLISTVTYFIDAVGRYKLSPQTRLKAENARAKV 445          
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Match: Q54VN3_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54VN3_DICDI)

HSP 1 Score: 94.0 bits (232), Expect = 2.310e-17
Identity = 77/305 (25.25%), Postives = 144/305 (47.21%), Query Frame = 3
Query:  327 LLLGYVVVYIVGRRRNSHIAHGFIIGVHGLFCSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDYAGVTRAPSL--LPPSLVCLSESSALLEPMLPXXXXXXXXXXXXXXELMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMMELALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKNERLQREREEYEGLTPEQKRRRD 1235
            +++GY+  Y +G + N  +   +   +  +F S F + G   +         + + + S++ + ATG   C G+Q ++DL  RHDLF +L  F      DR+T+E+A + E+++P++FA+ + + +KK   +   +  +       S+  L  S   L ++  L   +L               EL + TD +   ++  ++   K L++ F++P  S   +D  V  T +   AL YI ++   ++    K KA + R    +        +RQE  Q  K E+  +E+E    LTPEQ+R++D
Sbjct:   84 IIIGYIANYFIGSKANRELIQLWGAKLQPVFMSNFSKTGNRGDFT-------ILKVNPSSYSFIATGRNNCFGLQASLDLKKRHDLFSILLDFIGYGNPDRMTLEIAMNKENMDPLVFALVKTKSLKKFKSDNSDVDLFCSKYTGSSINTLSNSFGVLCDTDILPSLLLKQQEIQVINQNENLIELFHFTDHS---LINPKYP--KALKFVFKIPKASE--MDKLVLLTRV---ALHYIDVVANLELPKNYKAKADKLRDKAKENIEKQAQLERQEEIQKKKFEKKLKEKEAIGKLTPEQQRKKD 371          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6726.17626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC0_ECTSI5.100e-25196.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1HVC4_KLENI2.580e-2029.20Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
B8LPZ1_PICSI2.160e-1927.63Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
B9SSM7_RICCO2.490e-1925.96Uncharacterized protein n=1 Tax=Ricinus communis T... [more]
A0A078H6T0_BRANA4.960e-1827.54(rape) hypothetical protein n=11 Tax=Brassiceae Ta... [more]
A0A484MK75_9ASTE5.780e-1828.99Uncharacterized protein n=3 Tax=Cuscuta sect. Clei... [more]
A0A1R3HXZ0_COCAP6.830e-1826.58Uncharacterized protein n=2 Tax=Corchorus TaxID=93... [more]
A0A2P6PCU7_ROSCH7.050e-1825.99Uncharacterized protein n=1 Tax=Rosa chinensis Tax... [more]
A0A176WFX9_MARPO1.970e-1726.07Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
Q54VN3_DICDI2.310e-1725.25Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6726contigEcto-sp13_S_contig6726:2659..5418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score697.2
Seed ortholog evalue4.4e-198
Seed eggNOG ortholog2880.D8LUC0
Preferred nameCCDC47
Model size1292
KEGG rclassRC00741,RC01491,RC01492,RC03042
KEGG koko:K04035
KEGG ReactionR06265,R06266,R06267,R10068
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005791,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006983,GO:0006984,GO:0006996,GO:0007029,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009607,GO:0009791,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0012505,GO:0016043,GO:0019538,GO:0019941,GO:0023052,GO:0030163,GO:0030433,GO:0032501,GO:0032502,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0042592,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051603,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0065007,GO:0065008,GO:0071216,GO:0071704,GO:0071840,GO:0072507,GO:0098771,GO:1901564,GO:1901565,GO:1901575,GO:1901698
Exons4
EggNOG free text desc.calcium ion binding
EggNOG OGsKOG2357@1,KOG2357@2759
Ec32 ortholog descriptionProtein of unknown function DUF1682
Ec32 orthologEc-14_004420.1
EC1.14.13.81
Cds size1173
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463924.953514-UTR-Ecto-sp13_S_contig6726:2658..27771681463924.953514-UTR-Ecto-sp13_S_contig6726:2658..2777Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6726 2659..2777 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463924.9687436-CDS-Ecto-sp13_S_contig6726:2777..28831681463924.9687436-CDS-Ecto-sp13_S_contig6726:2777..2883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6726 2778..2883 +
1681463924.9834225-CDS-Ecto-sp13_S_contig6726:3472..36801681463924.9834225-CDS-Ecto-sp13_S_contig6726:3472..3680Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6726 3473..3680 +
1681463925.0023289-CDS-Ecto-sp13_S_contig6726:4059..46771681463925.0023289-CDS-Ecto-sp13_S_contig6726:4059..4677Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6726 4060..4677 +
1681463925.0142689-CDS-Ecto-sp13_S_contig6726:5177..54181681463925.0142689-CDS-Ecto-sp13_S_contig6726:5177..5418Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6726 5178..5418 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6726.17626.1prot_Ecto-sp13_S_contig6726.17626.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6726 2778..5418 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6726.17626.1

>prot_Ecto-sp13_S_contig6726.17626.1 ID=prot_Ecto-sp13_S_contig6726.17626.1|Name=mRNA_Ecto-sp13_S_contig6726.17626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=391bp
MTTATFASGDMSLDDEFRTDPFFSPETAGAAHPSTAVWSDGKVSLAGLFS
MQWAKQELHLTAVEYLGFALLLGYVVVYIVGRRRNSHIAHGFIIGVHGLF
CSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLA
SRHDLFMVLWSFFTPAMGDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQ
EVPHLQDYAGVTRAPSLLPPSLVCLSESSALLEPMLPPSVLKSLSENGSL
LELMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGVDGSVGATEMME
LALSYIQLLNKFKMSAVTKKKALERRAAVLKRKSAITHAQRQERFQMLKN
ERLQREREEYEGLTPEQKRRRDLRDEKKAKKVASSKRHKAR
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mRNA from alignment at Ecto-sp13_S_contig6726:2659..5418+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6726.17626.1 ID=mRNA_Ecto-sp13_S_contig6726.17626.1|Name=mRNA_Ecto-sp13_S_contig6726.17626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2760bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6726:2659..5418+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTTACCGTGTGCGTGTGCCTACGCTGTACTGCAGTAGCCTGCACCACTG CATTGCACTGCTGTGTTGCGCAACGGATCCGTCCATCGACACCGCGCTAT TAGCATTGTTTTGACCGTGATGACCACGGCGACCTTCGCCTCCGGAGATA TGTCATTGGACGATGAATTCAGGACCGATCCTTTCTTTTCACCGGAAACT GCCGGCGCTGCTCATCCGTCGACAGGTACAAAACTGAAGTACATAGGTGC AGAAGAGATATGTGTCGCGAGGCGGGGTCGTCTATCGTGCCATTTCCGTC GAGAGCGAAAGTGCAGGAGGAGTGCAACATTAATCAACGTGTCAGATGTC GTAAGCCGTTATCGGTATTATGCAGTGCTGTTTTTAGTCGGATCATTTTT TGGTGAGCAGCCTGAGCCCGACGGGGGGCAAATCCATCCATCCTGTACAG CAGTCCATATGTGTAGCACATGATATGCATACGAAACACGGCCACGGCAA AGTGTATCTATGCATAACAGAGTTGGTTTGGCGTTGGAGGACGCTCCTAA GTCTAACGAGACCCCAAAGCTTGCAAGGGATGTCTCCTGAACCCGCCTTG ATCCCCCACCCCATCCCAACTCGTGCGCATTTACAGCAGTACTTTCCTTG CTTGACATGTATGCGTATCCCTCAGGTAAACATCACACAGACACTTTCTG TACGGTTGCACAGCAGTACGCTGGTGTCCGACCTTCAGTACAGAGCGGCC TCTCTGTATCGATGTAGCTTACCTCCGCCCGTTGCGCTATTGGTGAATCC TGCCCCTCTGTCAGCGGTCTGGTCAGATGGGAAAGTAAGCCTGGCAGGAC TGTTTTCCATGCAGTGGGCTAAGCAAGAGCTGCATCTCACGGCGGTGGAA TATTTGGGGTTCGCTCTGCTGCTGGGGTACGTCGTGGTGTACATCGTCGG GCGGAGACGGAATAGCCACATCGCTCACGGGTTCATCATTGGTGTCCATG GGCTGTTCTGCAGCCGATTCTTGTGAGTAAACCTATCTACTTCAGATTGC GGGATACGAGGCTACTTCCGCCGCCGCCGCCGCTGCTGTTCAATACCGTG TAAAGCACGTCAGTGCTTGAGAGGAATATATTGTATGGTATTCCATTACC GAGTCGAATACAACCGACATTCAACGCCCATGTAGATGGTGCAGGTGGGT GCTATGACCCGATTTCGTCTCTGTTGTACGCCCAACTCATAAACATACCG GCAATGTGTTCATGCCGACGTCACGCTGACGAAAAAGCCTTGCCGCCTTT TCTATGCCGAGTTTTTAATGTTTTTTTTTCATTAGGCAATCGGGTACATA GCGCGGTCGATACTAATACAAAAACATACGCACATTTGCGGATCTTTCCA GGGAGGCAGGCCCTGCGTCAGAGATGCCGCCCGTCGATCGACGGCAGCTC CTGGCGCGCGACAGCTGCAGCACCTTCCTTTACTACGCCACCGGAAGCCG GCGGTGCTTGGGTGTGCAAGTCACGATCGACCTCGCCAGCCGTCACGACC TGTTCATGGTCCTGTGGTCCTTCTTTACCCCGGCCATGGGCGACCGGGTC ACCGTGGAGGTGGCCTTTGACGACGAGGACATCGAGCCCGTGATTTTCGC CGTCGCCCGCAAGCGCGAAGTGAAGAAGCTCCTGCAGGAGGTGCCTCACC TTCAGGACTACGCGGGGGTCACCCGAGCGCCCTCCCTTCTCCCCCCGTCG CTCGTCTGCCTGTCGGAGAGCTCCGCTCTCCTGGAACCGATGCTGCCGCC CTCGGTCCTCAAGAGCCTCAGCGAGAATGGTAGCCTTCTCGAGCTCATGT ACGTGACCGACCAGAACGACCAGCCGATATTGGGGCAGGAGCACACGCCT AAGAAGGTGCTGCGGTATACGTTCCGGTTGCCGGTGGGGTCGGCGAGGGG TGTCGACGGGAGCGTCGGGGCGACGGAGATGATGGAGCTGGCGCTTTCCT ACATCCAGCTCTTGAACAAGTGAGGCATGCACTGTCGGTCTGTACCGCCA CTTGAGGCTGACTTGTTTCAAATGCTGTAGGGTGTCGCTGGGGCGTGCAT GTTCTATGCCCGCCGGCTTGGTTTGTTCCGAATGCTTCCTGTTGGTGGCA TTACGTCCAAAAACCTTCGCGCGGCGCCAACGCGGATGGAGTAGGGTTGG GTTGTAGTCTAGGCCCCCCAAGTTAGCGATGACAACGAATTCTGTTCCGG GGGTTCGTTTGATATGCCACCCCAGTACGTAGAACCATAGTTATTGTCGA GCGAAGCGCGTGGCGTCATGAATACGGAGCGCTACATGACTGGGGCAACG CGGCCTACCCTACTACCTGTTGCATGGGTGTCCGTCAAGACAACAGTCAG TTGACCACCTCATACGCAGCGAGTGACGATGAAACTCGACCCGAGTGACG ATGAAACTCGAACACTCACGCGTCGCCTTTGTGTTCCTTGTGGTACTTCG CTATCATGGGCAAATGAAGGTTTAAGATGTCCGCGGTCACGAAAAAGAAG GCTTTGGAACGGCGGGCAGCCGTGCTGAAACGAAAGTCTGCGATAACGCA CGCCCAGAGGCAGGAGCGCTTCCAGATGCTGAAGAACGAGCGGCTGCAGA GAGAACGGGAAGAGTACGAGGGCCTCACGCCAGAGCAGAAGCGGCGGCGA GACTTGAGGGACGAAAAAAAGGCCAAGAAGGTTGCCTCCAGCAAAAGGCA TAAGGCACGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6726:2659..5418+

>mRNA_Ecto-sp13_S_contig6726.17626.1 ID=mRNA_Ecto-sp13_S_contig6726.17626.1|Name=mRNA_Ecto-sp13_S_contig6726.17626.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1173bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6726:2659..5418+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCACGGCGACCTTCGCCTCCGGAGATATGTCATTGGACGATGAATT
CAGGACCGATCCTTTCTTTTCACCGGAAACTGCCGGCGCTGCTCATCCGT
CGACAGCGGTCTGGTCAGATGGGAAAGTAAGCCTGGCAGGACTGTTTTCC
ATGCAGTGGGCTAAGCAAGAGCTGCATCTCACGGCGGTGGAATATTTGGG
GTTCGCTCTGCTGCTGGGGTACGTCGTGGTGTACATCGTCGGGCGGAGAC
GGAATAGCCACATCGCTCACGGGTTCATCATTGGTGTCCATGGGCTGTTC
TGCAGCCGATTCTTGGAGGCAGGCCCTGCGTCAGAGATGCCGCCCGTCGA
TCGACGGCAGCTCCTGGCGCGCGACAGCTGCAGCACCTTCCTTTACTACG
CCACCGGAAGCCGGCGGTGCTTGGGTGTGCAAGTCACGATCGACCTCGCC
AGCCGTCACGACCTGTTCATGGTCCTGTGGTCCTTCTTTACCCCGGCCAT
GGGCGACCGGGTCACCGTGGAGGTGGCCTTTGACGACGAGGACATCGAGC
CCGTGATTTTCGCCGTCGCCCGCAAGCGCGAAGTGAAGAAGCTCCTGCAG
GAGGTGCCTCACCTTCAGGACTACGCGGGGGTCACCCGAGCGCCCTCCCT
TCTCCCCCCGTCGCTCGTCTGCCTGTCGGAGAGCTCCGCTCTCCTGGAAC
CGATGCTGCCGCCCTCGGTCCTCAAGAGCCTCAGCGAGAATGGTAGCCTT
CTCGAGCTCATGTACGTGACCGACCAGAACGACCAGCCGATATTGGGGCA
GGAGCACACGCCTAAGAAGGTGCTGCGGTATACGTTCCGGTTGCCGGTGG
GGTCGGCGAGGGGTGTCGACGGGAGCGTCGGGGCGACGGAGATGATGGAG
CTGGCGCTTTCCTACATCCAGCTCTTGAACAAGTTTAAGATGTCCGCGGT
CACGAAAAAGAAGGCTTTGGAACGGCGGGCAGCCGTGCTGAAACGAAAGT
CTGCGATAACGCACGCCCAGAGGCAGGAGCGCTTCCAGATGCTGAAGAAC
GAGCGGCTGCAGAGAGAACGGGAAGAGTACGAGGGCCTCACGCCAGAGCA
GAAGCGGCGGCGAGACTTGAGGGACGAAAAAAAGGCCAAGAAGGTTGCCT
CCAGCAAAAGGCATAAGGCACGT
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