mRNA_Ecto-sp13_S_contig6725.17624.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: D7G5B3_ECTSI (Prefoldin subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5B3_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.390e-58 Identity = 105/126 (83.33%), Postives = 109/126 (86.51%), Query Frame = 1
Query: 1 LRSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGRVCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEAK----SCITSELRPAELVN 366
L SKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGRVCIWLGASVMVEYTYKEALELLERNLATALEKK + + + IT E+ A L N
Sbjct: 60 LYSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGRVCIWLGASVMVEYTYKEALELLERNLATALEKKKTTQEDLEFLRNQSITVEVNMARLYN 185
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A835ZGV7_9STRA (Prefoldin subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGV7_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.650e-32 Identity = 65/126 (51.59%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 LRSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGRVCIWLGASVMVEYTYKEALELLERNLATALEKKVS----ICLEAKSCITSELRPAELVN 366
L SKYK+ E+N+++ + +MK K+PEIERSL+LV+HL ++Q+++E V+T+Y+LADTV+ KAEL DG VCIWLGA+VM+EY+Y+EA ELL ++LA A +K V + L + IT E+ A + N
Sbjct: 73 LYSKYKMFETNLERTRSNMKAKIPEIERSLDLVKHLIQKQEEDEKVQTHYNLADTVYGKAELTGDGCVCIWLGANVMLEYSYEEAHELLVKSLANAEQKLVETVEDLQLLRNNIITVEVNMARIFN 198
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A5D6YMX9_9STRA (Prefoldin subunit 3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMX9_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.280e-29 Identity = 61/127 (48.03%), Postives = 90/127 (70.87%), Query Frame = 1
Query: 1 LRSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEAK----SCITSELRPAELVN 366
L SKYK ME+N+ K+++S K KVPE E+ L ++HL E+QD E++ T ++LAD V+AKA + C G+VCIWLGA+VMVEY+Y+EALELL+ N+A+A ++ I + + IT+E+ A + N
Sbjct: 62 LYSKYKFMETNLQKSRESFKRKVPETEKDLAALKHLMEKQDAGESISTRFNLADNVYAKATVDCSVGKVCIWLGANVMVEYSYEEALELLQHNIASANDRLAQIDADLAFLRDAIITTEVNIARIFN 188
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: K3WAP4_GLOUD (Prefoldin subunit 3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAP4_GLOUD) HSP 1 Score: 113 bits (283), Expect = 4.560e-29 Identity = 61/127 (48.03%), Postives = 88/127 (69.29%), Query Frame = 1
Query: 1 LRSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEAK----SCITSELRPAELVN 366
L SKYK ME+N+ K++ S K K+PE E+ L +++HL +QD+ E + T ++LAD V+AKA + C G+VCIWLGA+VMVEY+Y+EALELL+ N+A A E+ I + S IT+E+ A + N
Sbjct: 62 LYSKYKFMETNLQKSRDSFKRKIPETEKDLSMLKHLMAKQDEGEEIHTRFNLADNVYAKATVDCSVGKVCIWLGANVMVEYSYEEALELLQNNVAVANERLTQIDADLAFLRDSIITTEVNIARIFN 188
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A3F2RXD4_9STRA (Prefoldin subunit 3 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXD4_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.350e-28 Identity = 59/125 (47.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 7 SKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEK----KVSICLEAKSCITSELRPAELVN 366
SKYK ME+++ K ++S K K+P+ ++ L+ +RHL ++D+ ET++T ++LAD V+AKA + C G+VCIWLGA VMVEY Y+EALELLE+N+ATA EK + + IT+E+ A + N
Sbjct: 66 SKYKFMETSLQKNRESFKRKIPDTQKDLDTLRHLISKRDEGETLQTQFNLADNVYAKASVDCSIGKVCIWLGAQVMVEYPYEEALELLEKNVATATEKLEQIETDLSFLRDQIITTEVNIARIFN 190
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: M4B850_HYAAE (Prefoldin subunit 3 n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B850_HYAAE) HSP 1 Score: 112 bits (280), Expect = 1.390e-28 Identity = 60/125 (48.00%), Postives = 91/125 (72.80%), Query Frame = 1
Query: 7 SKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEA----KSCITSELRPAELVN 366
SKYK ME+++ K++++ K+P+ E+ L +VRH+ ++D ET+KT++++AD V+AKAE+ C G+VCIWLGA VMVEY Y+EAL+LLE+N+A+A EK V I + S IT+E+ A + N
Sbjct: 66 SKYKFMETSLQKSRETFNRKIPDTEKDLAIVRHVITKRDAGETLKTHFNMADNVYAKAEVDCSVGKVCIWLGAHVMVEYEYEEALKLLEKNVASATEKLVQIEEDLFFLRDSIITTEVNIARIFN 190
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A0N7L5Y1_PLAHL (Prefoldin subunit 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Y1_PLAHL) HSP 1 Score: 112 bits (279), Expect = 1.730e-28 Identity = 59/125 (47.20%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 7 SKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEAK----SCITSELRPAELVN 366
SKYK ME+N+ K +++ K K+PE ++ L++V+HL ++D+ ET++T ++LAD V+A A + C G+VCIWLGA VMVEY+Y+EA ELLE+N+ATA EK I + IT+E+ A + N
Sbjct: 62 SKYKFMETNLQKNRETFKRKIPETQKDLDMVQHLMTKRDEGETLQTQFNLADNVYANASVDCSLGKVCIWLGAQVMVEYSYEEAQELLEKNMATASEKLAQIEEDLSFLRDQIITTEVNIARIFN 186
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A2D4CEL1_PYTIN (Prefoldin subunit 3 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEL1_PYTIN) HSP 1 Score: 108 bits (271), Expect = 2.960e-27 Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 1 LRSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEK----KVSICLEAKSCITSELRPAELVN 366
L SKYK ME N+ K + S K K+PE E+ LE++RHL ++Q++ E ++T++SLAD V+AKA + G+VCIWLGA+VMVEYTY+EALELLE N+ A E+ + + IT+E+ A + N
Sbjct: 63 LYSKYKFMEVNLQKNRDSFKRKIPETEKDLEMLRHLLQKQEEGENIQTHFSLADNVYAKATVDSSVGKVCIWLGANVMVEYTYEEALELLEGNVKIATERLEQLESDLGFLRDQIITTEVNIARIFN 189
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A484E4G4_BRELC (Prefoldin subunit 3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4G4_BRELC) HSP 1 Score: 108 bits (270), Expect = 4.290e-27 Identity = 59/125 (47.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 7 SKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCD-GRVCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEAK----SCITSELRPAELVN 366
SKYK ME+++ K +++ K K+P+ ++ L++VRHL ++D+ ET++T++SLAD V+AKA + C G+VCIWLGA VMVEY Y EA ELLE N+A+A EK I + IT+E+ A + N
Sbjct: 66 SKYKFMETSLQKNRETFKRKIPDTQKDLDMVRHLVAKKDEGETLQTHFSLADNVYAKASVDCQIGKVCIWLGAQVMVEYPYGEAQELLESNVASATEKLAQIEEDLSFLRDQIITTEVNIARIFN 190
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Match: A0A485L9G8_9STRA (Prefoldin subunit 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9G8_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.690e-27 Identity = 60/125 (48.00%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 7 SKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGR-VCIWLGASVMVEYTYKEALELLERNLATALEKKVSICLEA----KSCITSELRPAELVN 366
SKYK ME+N+ K+KQS+K KVP+ ++ L ++ HL +++KEE ++T++SLAD VFAKA + D + VCIWLGA+VMVEY++ EALELL NL TA+++ I + IT+E+ A + N
Sbjct: 50 SKYKFMETNLTKSKQSLKIKVPDTQKDLAMLEHLISQREKEENIETHFSLADNVFAKATIDADVKTVCIWLGANVMVEYSFDEALELLNGNLKTAVQRLEQIESDLGFLRDQIITTEVNMARIFN 174 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6725.17624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6725.17624.1 >prot_Ecto-sp13_S_contig6725.17624.1 ID=prot_Ecto-sp13_S_contig6725.17624.1|Name=mRNA_Ecto-sp13_S_contig6725.17624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=115bp MESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFback to top mRNA from alignment at Ecto-sp13_S_contig6725:6095..7855+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6725.17624.1 ID=mRNA_Ecto-sp13_S_contig6725.17624.1|Name=mRNA_Ecto-sp13_S_contig6725.17624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1761bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6725:6095..7855+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6725:6095..7855+ >mRNA_Ecto-sp13_S_contig6725.17624.1 ID=mRNA_Ecto-sp13_S_contig6725.17624.1|Name=mRNA_Ecto-sp13_S_contig6725.17624.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=345bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6725:6095..7855+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |