prot_Ecto-sp13_S_contig6723.17621.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6723.17621.1
Unique Nameprot_Ecto-sp13_S_contig6723.17621.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length131
Homology
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 3.720e-67
Identity = 117/130 (90.00%), Postives = 122/130 (93.85%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSSKEGPSDLETAVAGDSSGSGTAVNNHNRNMTVGASPQVRQVSQMP 130
            MYR VVIKNITCTIAVVTAYAVT+VVVIAALIRQ+N+SNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSS  EGPSDLETA+AG SSGSGTAVNNHNR MT GASPQV +VSQ P
Sbjct:  249 MYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSPNEGPSDLETAMAGGSSGSGTAVNNHNRAMTGGASPQVPEVSQTP 378          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.870e-40
Identity = 82/115 (71.30%), Postives = 91/115 (79.13%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSSKEGPSDLETAVAGDSSGSGTAVNNHNRNM 115
            +YRRVVIKNITCTIAVVTAYAVT+VVVIAAL+RQNN+SNT                     IALPLGF+SCWKACSLELC+W SSSKEGPSDLETA+ GDSSGSGTA NNHNR++
Sbjct:  246 IYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSNT---------------------IALPLGFTSCWKACSLELCTWPSSSKEGPSDLETAMTGDSSGSGTAANNHNRDV 339          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 5.530e-16
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACS 76
            +YRRVV++N+ CT  +V +YA+T++VV+ AL+R++ ESN ++   D+    N   TLCLTEI LPLGF SC KACS
Sbjct:   99 VYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACS 174          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.540e-14
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCS 81
            +YRR+V++N+ CTIA+   YAVT+V+V+   +     S  A+  AD+ P  N FVTLCLTE++LPLGFSSC KA   E  S
Sbjct:  127 VYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCVKAIKAETSS 207          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 6.720e-14
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCS 81
            +YRR+V++N+ CTIA+   YAVT+V+V+   +     S  A+  AD+ P  N FVTLCLTEI+LPLGFSSC KA   E  S
Sbjct:  228 VYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCVKAIKAETSS 308          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 6.790e-13
Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCS 81
            +YRR+V++N+ CTI +   YAVT+V+V+   +     S  A+  AD+ P  N FVTLC+TE++LPLGFSSC K+   E  S
Sbjct:   97 VYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCVKSIKAETSS 177          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: D8LN53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN53_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 6.250e-9
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEI 62
            +YRRVV++NI CT+ +  AY +T+VVV+ A +   +++N A++   ITP +N  VTLCLTE+
Sbjct:   39 VYRRVVVRNIVCTVGIACAYVITTVVVVLAHVSTPSDTNKAAVLGHITPSINICVTLCLTEV 100          
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Match: A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.410e-8
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPLVNQFVTLCLTEI 62
            +YRRVVI+NI CTI +  AY +T+VVV+ AL+    +++ A+   DI P +N  VTLCLTE+
Sbjct:  182 VYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6723.17621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JY97_9PHAE3.720e-6790.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG96_ECTSI3.870e-4071.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2C9_ECTSI5.530e-1652.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K249_9PHAE2.540e-1450.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPA3_9PHAE6.720e-1451.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN45_ECTSI6.790e-1346.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN53_ECTSI6.250e-946.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPA0_9PHAE2.410e-850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6723contigEcto-sp13_S_contig6723:5084..6585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6723.17621.1mRNA_Ecto-sp13_S_contig6723.17621.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6723 2982..6660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6723.17621.1 ID=prot_Ecto-sp13_S_contig6723.17621.1|Name=mRNA_Ecto-sp13_S_contig6723.17621.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp
MYRRVVIKNITCTIAVVTAYAVTSVVVIAALIRQNNESNTASLFADITPL
VNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSSKEGPSDLETAVAGD
SSGSGTAVNNHNRNMTVGASPQVRQVSQMP*
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