prot_Ecto-sp13_S_contig672.17618.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig672.17618.1
Unique Nameprot_Ecto-sp13_S_contig672.17618.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1484
Homology
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BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 1234 bits (3192), Expect = 0.000e+0
Identity = 1006/1175 (85.62%), Postives = 1024/1175 (87.15%), Query Frame = 0 
Query:  322 RPVAGDXXXGRGEAESDVQVSFPPHFNDGRKSGSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDSAAGGSPRTPLSDNSSTHDGXXXXXXXXXXXXXXXXXXXXXXXXLPPEVSVGNAGAGGDGEFDDMDLPSAHPTPLSAFGGGDGEXXXXXXXXXXXLGSSMDRGRSQSRAGGDGDDKSADGRSKSIEAASGSFMQRLKYWSGMNRQDSSTSMASAPSKHGRGHRGGSAGAGGSRVAVAAVQGSAATXXXXA-----TSXXXXXXXXXXXXXXXXXXXXXXXXRIARTASSVSQGGVSPRKLPASFTRSSGRIADPRGSGGVRPSQVARPSTAKSGSSGXXXXXXXXXXXXXXXXXXXXXXXX------YSETTTSEASGISPSELRGVPVVPFDSVTSDATSAYNAGPPPAYRSHGGGRVRT-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAGRLGDDAAAEKEEGAPARSRQFSDFGASHRAELAAMRRARGTPSPGDEEVKDEEKEVXXXXXXXEGEMNWGATSDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAPEEPKPLRXXXXXXXXXXXXXXXXXXXXXXXXXXX-RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMTLGGGGVHKRRPSRRRQLSNMSNRTLHGVAGGEGEEEDADSDEGSVVDAGVAARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYIAQGGDLEASSIRDQFQATALMLCAERGHTQMVDDLLSAGAEVSCVDENANSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLATDPAIRRILRTEQMVRFSGETFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAIASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGRLEMKNLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDADLGRXXXXXXXXXXXXRHLADRMESVHKLLKGVSALQ 1483
            RP AGD XX   +AESDVQV+FP HF+DGRK+GSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDSAAGGSPRTPLSDNSS H           XXXXXXXXXXXXXXXLPP VSVGNAGAGGDGE+DDMDLPSAHPTPLSAFGGGDGEXXXXXXXXXXX  SS  RGRS SRAGGDGDDKSADGRSKSIEA SGSFMQRLKYWSGM  QDSSTSMASAPSKHGRGHRGGS GAGGSRV V AVQGSAAT XXX      +           X  XXXXXXXXXXX      SS  QGGVSPRKLPASFTRSSGRIADPRGSGGVRPS+ A+PSTA SGSS XXXXXXXXXXXXXX                YSET  SEASGISP ELRGVPV+PFDSVTSDATSAYNAGPPPAYRSHGGGRV T A         XXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAGR GDDA+AEKEEGAPA+SR+FSDFGASHRAELAAMRRARGT SPGDEEVKD     XXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DV PE+PKPLR  XXXXXXXXXXXXXXXXXXXXXXXXX RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAM LGGGGVHKRRPSRRRQLSNMSNRTLH VAGGEGEEEDADSDEGSV+DAG AARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYI+QGGDLE   IRDQFQATALMLCAERGHTQMVDDL                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DLATDPAIRRILR EQMVRFSGE FDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVA+ASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSI XXXXXXXXXXXXXXXXXXXXXX    +AGGR EMK+LLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKD DLG XXXXXXXXXXXX  LADRMESVHKLLKGVSALQ
Sbjct:    8 RPAAGDGXXXXXDAESDVQVNFPSHFDDGRKNGSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDSAAGGSPRTPLSDNSSAH-----------XXXXXXXXXXXXXXXLPPAVSVGNAGAGGDGEYDDMDLPSAHPTPLSAFGGGDGEXXXXXXXXXXXXXSSTGRGRSLSRAGGDGDDKSADGRSKSIEAGSGSFMQRLKYWSGMTHQDSSTSMASAPSKHGRGHRGGSTGAGGSRVTVEAVQGSAATAXXXXXXXXXSGAGRAAGTAAAXKEXXXXXXXXXXXXXXXXXSSAPQGGVSPRKLPASFTRSSGRIADPRGSGGVRPSEAAQPSTANSGSSXXXXXXXXXXXXXXXRSRPVAAAPLSESPPPYSETARSEASGISPCELRGVPVMPFDSVTSDATSAYNAGPPPAYRSHGGGRVSTVAAVSSTRQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPAGRPGDDASAEKEEGAPAKSRKFSDFGASHRAELAAMRRARGTSSPGDEEVKDXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDVPPEKPKPLRYGXXXXXXXXXXXXXXXXXXXXXXXXXXRYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMALGGGGVHKRRPSRRRQLSNMSNRTLHSVAGGEGEEEDADSDEGSVMDAGAAARKLRRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLE---IRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXXCEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKGVSALQ 1167
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BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot
Match: A0A7D3ZNW7_9ACTN (Ankyrin repeat domain protein n=1 Tax=Actinomadura verrucosospora TaxID=46165 RepID=A0A7D3ZNW7_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 6.160e-6
Identity = 59/224 (26.34%), Postives = 90/224 (40.18%), Query Frame = 0 
Query: 1119 LAVPKDDRGEVIHVHTAAYNGKQDVLKAYIAQGGDLEASSIRDQFQATALMLCAERGHTQMVDDLLSAGAEVSCVDENANSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLATDPAIRRILRTEQMVRFSGETFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAIASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDG 1342
            LA   DD      + TAAY G   VLK  IA G D+ A+   D+   TAL++ A       V+ LL+AGA+         +A                                  ++  +         E  V  +    D  G ++V    + A    +   A         + IA+K++ L+   + G+S +H AA HG+AD +RLLLEAG++PN   + G
Sbjct:   16 LATGSDDVSRADALRTAAYLGDLAVLKEQIAAGADVNAA---DERGWTALLVAAREAFRDGVEALLAAGADPGIALPGGFTALHQVIQHTKDRPVKYEVTVVRDGVETVLTGRD--EIRAETGSHPDDEYEDCVDVARMLID--GGIDVEMATSEAGQTPLSHAASRGTAEITELLIATKQVDLDSRDKDGVSPLHYAARHGHADPVRLLLEAGANPNITENYG 232
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig672.17618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK98_ECTSI0.000e+085.62Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
A0A7D3ZNW7_9ACTN6.160e-626.34Ankyrin repeat domain protein n=1 Tax=Actinomadura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 863..883
NoneNo IPR availablePFAMPF13637Ank_4coord: 1309..1362
e-value: 2.2E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 1131..1247
coord: 1298..1400
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1127..1156
e-value: 1600.0
score: 3.5
coord: 1163..1192
e-value: 0.12
score: 21.4
coord: 1196..1225
e-value: 0.007
score: 25.6
coord: 1308..1337
e-value: 5.2E-4
score: 29.3
coord: 1341..1370
e-value: 3.6E-4
score: 29.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1196..1228
score: 11.808
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1341..1373
score: 12.182
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1163..1195
score: 9.511
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1308..1340
score: 12.209
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1133..1225
e-value: 2.1E-12
score: 47.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1132..1394
score: 43.423
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1095..1251
e-value: 9.0E-29
score: 102.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1282..1404
e-value: 3.9E-23
score: 83.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1129..1395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig672contigEcto-sp13_S_contig672:6949..18811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig672.17618.1mRNA_Ecto-sp13_S_contig672.17618.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig672 6949..20121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig672.17618.1 ID=prot_Ecto-sp13_S_contig672.17618.1|Name=mRNA_Ecto-sp13_S_contig672.17618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1484bp
MAPAVHVGRGWNGGSPSLRGEAAAADTTTAITEHQKHFQGDDSNKHHTTA
AASSQAVRPVRSRYAWSGGAGTSSSRSSAAAGTESGEGRKQQRSSGSGGL
AAEHRRHQRRQERHSCSSFEGYVTEGVGEELGRGSTTTSPSFTTSTTSSL
APAKLDKNATAEDEAPQPRGGAPGQFFGSGYHGGGKSKQQQQQQQQQQQG
ARKVQHQAVAAAGAAPPGLAAQGHRHVDEKASRATDSVREAWRIRGGVGN
REGERQRQARAPAWQQQQQRQGDSEPDLGGSSPGKGSASPRKDEAPPGFE
PLDTTTSDSGGGGIMSSGRHHRPVAGDGGGGRGEAESDVQVSFPPHFNDG
RKSGSGSENGSSSSSTCKARGDSLGTKSGSTSLLSMMSGSPRSIGTAPDS
AAGGSPRTPLSDNSSTHDGGGVGAAGSRRGGGGGGGAQEEGGGLPPEVSV
GNAGAGGDGEFDDMDLPSAHPTPLSAFGGGDGELPPDHPTPKSSLGSSMD
RGRSQSRAGGDGDDKSADGRSKSIEAASGSFMQRLKYWSGMNRQDSSTSM
ASAPSKHGRGHRGGSAGAGGSRVAVAAVQGSAATAAAAATSGAGRAAGTA
AAAKDATATATAASTRIARTASSVSQGGVSPRKLPASFTRSSGRIADPRG
SGGVRPSQVARPSTAKSGSSGGGDDSSSTRSRPVAAAPLSESPPPYSETT
TSEASGISPSELRGVPVVPFDSVTSDATSAYNAGPPPAYRSHGGGRVRTA
AAVSSTRQGPSPPYSAAVRKQQEQEEAARLAAAAAAPSPAGRLGDDAAAE
KEEGAPARSRQFSDFGASHRAELAAMRRARGTPSPGDEEVKDEEKEVSDE
EEQEEGEMNWGATSDKEEEKEEEEEKKQDFSAAFSPVTTAAAAAAATSKT
ASPRPPPRYLATSIKPSEQTTTTTTSASGGNDGGGLDVAPEEPKPLRHGG
SSSSPRHQASPSSPSQAALPPPPPRYMAIVEAANVKSALDNSSTSEHTDT
SPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMTLGGGG
VHKRRPSRRRQLSNMSNRTLHGVAGGEGEEEDADSDEGSVVDAGVAARKL
RRERLRKRAKQSRKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYIAQ
GGDLEASSIRDQFQATALMLCAERGHTQMVDDLLSAGAEVSCVDENANSA
LHLACFYGNTEAVELLLAVDADIAVVDSEGRTPLDLATDPAIRRILRTEQ
MVRFSGETFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAIASKRL
RLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTAC
NGGSILCATLLLEHGANPLATDANGLVPCEKHVAGGRLEMKNLLEAKAFQ
ATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDADLGR
LRQAVEARDTDIRHLADRMESVHKLLKGVSALQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf