prot_Ecto-sp13_S_contig6717.17612.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6717.17612.1
Unique Nameprot_Ecto-sp13_S_contig6717.17612.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6717.17612.1 vs. uniprot
Match: A0A6H5KVF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF9_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 1.460e-78
Identity = 178/189 (94.18%), Postives = 180/189 (95.24%), Query Frame = 0 
Query:    1 MNNEDMMISNLSQVLDEEREARRTAEEENSRLQTEADAATDAQRAQAKVVQTLTLELEDARKAQQXXXXXXXXXXXXXXXLVASSDTGRPRVNLEGNALRTPTTAWRGAVHGFDNGGGXXXXXXXXFXXXXXXXXXXXXHASSPGSTSNSVPGSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWE 189
            MNNEDMMISNLSQVLDEEREARRTAEEEN+RLQTEADAATDAQRAQAKVVQTLTLELEDARKAQQXXXXXXXXXXXXXXXLVASSD+GRPRVNLEGNALRTPTTAWRGAVHGFDNGGG    XXXX XXXXXXXXX   HASSPGSTSNSV GSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWE
Sbjct:  638 MNNEDMMISNLSQVLDEEREARRTAEEENARLQTEADAATDAQRAQAKVVQTLTLELEDARKAQQXXXXXXXXXXXXXXXLVASSDSGRPRVNLEGNALRTPTTAWRGAVHGFDNGGGSGAGXXXXXXXXXXXXXXS--HASSPGSTSNSVLGSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWE 824
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BLAST of mRNA_Ecto-sp13_S_contig6717.17612.1 vs. uniprot
Match: D8LTS1_ECTSI (Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS1_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 4.800e-75
Identity = 181/195 (92.82%), Postives = 183/195 (93.85%), Query Frame = 0 
Query:    1 MNNEDMMISNLSQVLDEEREARRTAEEENSRLQTEADAATDAQRAQAKVVQTLTLELEDARKAQQXXXXXXXXXXXXXXXLVASSDTGRPRVNLEGNALRTPTTAWRGAVHGFDNGGGXXXXXXXXFXXXXXXXXXXXXHASS------PGSTSNSVPGSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWE 189
            MNNEDMMISNLSQVLDEEREARRTAEEEN+RLQTEADAATDAQRAQAK VQTLTLELEDARKAQQXXXXXXXXXXXXXXXLVASSD+GRPRVNLEGNALRTPTTAWRGAVHGFDNGGGXXXXXXXX XXXXXXXXXXXX          PGSTSNSVPGSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWE
Sbjct: 1356 MNNEDMMISNLSQVLDEEREARRTAEEENARLQTEADAATDAQRAQAKAVQTLTLELEDARKAQQXXXXXXXXXXXXXXXLVASSDSGRPRVNLEGNALRTPTTAWRGAVHGFDNGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSTSNSVPGSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWE 1550
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6717.17612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVF9_9PHAE1.460e-7894.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTS1_ECTSI4.800e-7592.82Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..42
NoneNo IPR availableCOILSCoilCoilcoord: 50..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6717contigEcto-sp13_S_contig6717:110..1620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6717.17612.1mRNA_Ecto-sp13_S_contig6717.17612.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6717 110..1644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6717.17612.1 ID=prot_Ecto-sp13_S_contig6717.17612.1|Name=mRNA_Ecto-sp13_S_contig6717.17612.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
MNNEDMMISNLSQVLDEEREARRTAEEENSRLQTEADAATDAQRAQAKVV
QTLTLELEDARKAQQKAEQSAAQAAASAAALVASSDTGRPRVNLEGNALR
TPTTAWRGAVHGFDNGGGGGGGGGGGFGGSGGGGGNSGSHASSPGSTSNS
VPGSSRSNQLHTNAVLEFEERLEAIKVGLSQGVDCWVWEGALLLL*
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