mRNA_Ecto-sp13_S_contig6715.17609.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: D7FZ96_ECTSI (Amidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ96_ECTSI) HSP 1 Score: 646 bits (1667), Expect = 2.590e-229 Identity = 327/351 (93.16%), Postives = 334/351 (95.16%), Query Frame = 1
Query: 1 MEANGDAQGVAIAGAALVLVLVLYFARGDNKEKRSQEHWDAVCRRVLRERDNVTHRVLQDASDTPQEERHAEDIRIARLRGTELMAAMRNGTLSCERAVAAFCRRARAVGKVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTVAIDGPGRPLKV 1053
MEANGDAQGVAIAGAA+VLVLVLYFARGDNKEKRSQ+HWDAVCR VL+ERDNV HRVLQD SDTPQEERH+ED RIARLRGTELMAAMRNGTLSCERAVAAFCRRARAVGKVKTN VTEEFYDEAVQAARKVDASG TA+AGLLQGMPMSIKDAMHMKGALTTCGMACKA KGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTP+RMS+KGMESLSEDNKGGQRII PTPGPIANCVDDLELAMTALCS EMWD DKRIPRLPWDRTVAIDGPGRPLKV
Sbjct: 1 MEANGDAQGVAIAGAAVVLVLVLYFARGDNKEKRSQKHWDAVCRGVLQERDNVMHRVLQDGSDTPQEERHSEDTRIARLRGTELMAAMRNGTLSCERAVAAFCRRARAVGKVKTNGVTEEFYDEAVQAARKVDASGXXXXXXXPTATAGLLQGMPMSIKDAMHMKGALTTCGMACKAAKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPDRMSKKGMESLSEDNKGGQRIIHPTPGPIANCVDDLELAMTALCSVEMWDADKRIPRLPWDRTVAIDGPGRPLKV 351
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A6H5JCZ7_9PHAE (Amidase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ7_9PHAE) HSP 1 Score: 363 bits (931), Expect = 3.370e-120 Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 1
Query: 517 MACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTVAIDGPGRPLKV 1053
MACKA KGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSED K GQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTVAIDGPGRPLKV
Sbjct: 1 MACKAAKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDKKVGQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTVAIDGPGRPLKV 179
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A836CNU8_9STRA (Amidase signature domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU8_9STRA) HSP 1 Score: 251 bits (640), Expect = 3.520e-75 Identity = 136/270 (50.37%), Postives = 179/270 (66.30%), Query Frame = 1
Query: 262 MRNGTLSCERAVAAFCRRARAVGKVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGL------LQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTVAIDGPGRPLKV 1053
M G L+CE F RR+R +G ++ N+VTEE YDEA++AA+ +D SG + L L G+P+SIKD++ +G ++TCG+AC+ + KEDGLLV ++R GAIP+VR NVPQ +M+ E+DN IFGR+ NPW+ R GGSSGGEG+L+ASR++PL L SD+GGSIRIP +F GT G KPTPERM+ KG+ K GQRII T GP+ANCV D ELAM +LC + D +P PW VA G GRPL++
Sbjct: 1 MHAGELTCEAVTMCFIRRSRRLGLLQLNAVTEELYDEALEAAQALDRSG-------RLLTTDLDDPDLPLLGLPVSIKDSIEQRGTMSTCGVACRL-RLIYKEDGLLVSLMRTAGAIPYVRSNVPQLLMMSETDNRIFGRTLNPWSPLRGAGGSSGGEGALIASRASPLGLCSDIGGSIRIPANFCGTVGFKPTPERMTMKGLAIARAGGKVGQRIIRATAGPMANCVADCELAMRSLCGTHVSQQDSYVPPTPWSTDVARRGLGRPLRI 262
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A0M0J3E9_9EUKA (Amidase signature enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J3E9_9EUKA) HSP 1 Score: 223 bits (568), Expect = 5.610e-66 Identity = 123/260 (47.31%), Postives = 162/260 (62.31%), Query Frame = 1
Query: 244 TELMAAMRNGTLSCERAVAAFCRRARAVGKVKTNSVTEEFYDEAVQAARKVD---ASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDR 1014
TEL+ AM G LS E + F RA V + +VTE+ Y+EA+ A+ D A G G L G+P S+K+ + M G +TCG C+ + PS+E LLV + + GAIPF R NVPQ +MLPE+ NAI+G + NP++LGR+PGGS+GGE +L+A+R +PL LG+DVGGS+RIP TG C KPT +R+S KG+ N+ GQR + PGPIA CV DLEL M A C M+ D IPR+PWDR
Sbjct: 4 TELLGAMSIGRLSAEYVMRCFIARAIEVDET-LRAVTEQAYEEALAEAKACDLERAEG---------KLRGPLHGLPFSVKEQIRMAGFQSTCGACCRLAEAPSEETALLVTLAKQAGAIPFARTNVPQLLMLPETFNAIYGTTCNPYDLGRSPGGSTGGECALIAARGSPLGLGTDVGGSVRIPAFMTGLCAFKPTVDRLSYKGITVPRRGNRSGQREVRSAPGPIARCVADLELVMHAFCQPAMYAADTTIPRMPWDR 253
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A6V2WXT6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2WXT6_EMIHU) HSP 1 Score: 206 bits (524), Expect = 1.210e-58 Identity = 127/282 (45.04%), Postives = 171/282 (60.64%), Query Frame = 1
Query: 211 AEDIR-IARLRGTELMAAMRNGTLSCERAVAAFCRRARAVG-KVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNK-GGQRIILPTPGPIANCVDDLELAMTA-LCSAEMWDGDKRIPRLPWDRTVAIDGPGRP 1044
AE++R I L T L+ M G L+ + + AFC RA VG ++ TN+ +E + +A+ AA + D++ A G L G+P+S+KD + M G +TCG+ + P++ D LLVK+LR GAIPFVR NVPQC+MLPES N I+G + NPW+ RTPGGSSGGE +LVA+R++PL +G+D+GGSIRIP HF G G KPTP+RMS +G+ N+ GQ + T GP V DL L M A L M D D + R W A PG+P
Sbjct: 96 AENMRHICSLNATALLEEMTAGRLTSVQVMRAFCSRALHVGERLDTNA--QECFADALAAAEEADSARA------AGRPLGALHGLPVSVKDQLDMAGCDSTCGLQVRCG-APAEHDSLLVKLLRDQGAIPFVRSNVPQCLMLPESANRIWGAARNPWDASRTPGGSSGGEAALVAARASPLGIGTDIGGSIRIPAHFCGVFGFKPTPDRMSNRGVAVPRPGNRPSGQIAVKSTAGPFGRSVADLRLVMRAWLAGGGMSDSDVTLSRAGW----AEAEPGKP 364
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A482RF94_9ARCH (Amidase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RF94_9ARCH) HSP 1 Score: 199 bits (507), Expect = 1.620e-58 Identity = 113/244 (46.31%), Postives = 152/244 (62.30%), Query Frame = 1
Query: 220 IRIARLRGTELMAAMRNGTLSCERAVAAFCRRARAVGKVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTPGPIANCVDDLELAMT 951
+RI T+L AA+ G ++ E+ V F R VG + +VTEE Y A++AAR DA A + G L G+P+S+KD + G +TCG AC+ + P+ +D +++ VLR GAIPFVR NVPQC+MLPES N I+G NP+N RTPGGSSGGEG+L+ + +PL +G+D+GGSIRIP HF G G KPTP+R+S G+ + + GQ ILP GP+ C DDL L T
Sbjct: 8 LRILTSTATQLAAALAAGDVTSEQIVRVFALRCATVG-MSMAAVTEENYTNALEAARASDARRA------AGNALGPLDGIPISVKDQIDQAGFDSTCGNACRTFR-PAAQDAVVIAVLRRAGAIPFVRSNVPQCLMLPESCNIIWGACTNPFNAARTPGGSSGGEGALIGAHCSPLGIGTDIGGSIRIPAHFCGVYGFKPTPQRVSHVGIPAPRPRSVTGQNAILPAVGPLGCCPDDLALVRT 243
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: R1FJ27_EMIHU (Amidase domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FJ27_EMIHU) HSP 1 Score: 205 bits (522), Expect = 3.230e-57 Identity = 126/282 (44.68%), Postives = 171/282 (60.64%), Query Frame = 1
Query: 211 AEDIR-IARLRGTELMAAMRNGTLSCERAVAAFCRRARAVG-KVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNK-GGQRIILPTPGPIANCVDDLELAMTA-LCSAEMWDGDKRIPRLPWDRTVAIDGPGRP 1044
AE++R I L T L+ M G L+ + + AFC RA VG ++ TN+ +E + +A+ AA + D++ A G L G+P+S+KD + M G +TCG+ + P++ D LLVK+LR GAIPFVR N+PQC+MLPES N I+G + NPW+ RTPGGSSGGE +LVA+R++PL +G+D+GGSIRIP HF G G KPTP+R+S +G+ N+ GQ + T GP V DL L M A L M D D PR W A PG+P
Sbjct: 75 AENMRHICSLNATALLEEMTAGRLTSVQVMRAFCSRALHVGERLDTNA--QECFADALAAAEEADSARA------AGRPLGALHGLPVSVKDQLDMAGCDSTCGLQVRCG-APAEHDSLLVKLLRDQGAIPFVRSNLPQCLMLPESANRIWGAARNPWDASRTPGGSSGGEAALVAARASPLGIGTDIGGSIRIPAHFCGVFGFKPTPDRISNRGVAVPRPGNRPSGQIAVKSTAGPFGRSVADLRLVMRAWLAGGGMSDSDVTCPRAGW----AEAEPGKP 343
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A7S3TM80_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TM80_EMIHU) HSP 1 Score: 205 bits (521), Expect = 8.990e-57 Identity = 123/270 (45.56%), Postives = 166/270 (61.48%), Query Frame = 1
Query: 211 AEDIR-IARLRGTELMAAMRNGTLSCERAVAAFCRRARAVG-KVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNK-GGQRIILPTPGPIANCVDDLELAMTA-LCSAEMWDGDKRIPRLPW 1008
AE++R I L T L+ M G L+ + + AFC RA VG ++ TN+ +E + +A+ AA + D++ A G L G+P+S+KD + M G +TCG+ + P++ D LLVK+LR GAIPFVR NVPQC+MLPES N I+G + NPW+ RTPGGSSGGE +LVA+R++PL +G+D+GGSIRIP HF G G KPTP+RMS +G+ N+ GQ + T GP V DL L M A L M D D + R W
Sbjct: 96 AENMRHICSLNATALLEEMTAGRLTSVQVMRAFCSRALHVGERLDTNA--QECFADALAAAEEADSARA------AGRPLGALHGLPVSVKDQLDMAGCDSTCGLQVRCG-APAEHDSLLVKLLRDQGAIPFVRSNVPQCLMLPESANRIWGAARNPWDASRTPGGSSGGEAALVAARASPLGIGTDIGGSIRIPAHFCGVFGFKPTPDRMSNRGVAVPRPGNRPSGQIAVKSTAGPFGRSVADLRLVMRAWLAGGGMSDSDVTLSRAGW 356
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A7S2K5Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5Q6_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.040e-55 Identity = 137/340 (40.29%), Postives = 189/340 (55.59%), Query Frame = 1
Query: 28 VAIAGAALVLVLVLYFARGDNKEKRSQEHWDAVCRRVLRERDNVTHRVLQD-ASDTPQEERHAEDIRIARLRGTELMAAMRNGTLSCERAVAAFCRRARAVGKVK---TNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAG---LLQGMPMSIKDAMHMKGALTTCGMACKA-DKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTP-GPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTV 1020
VA A + V V+ + D ++K +AV RR D H+VL+ AS T Q++ + D E + G +S + RR G+ N++TEEFYDE A K+ S G + LL G+P+S+KD + +KGAL T G+ C+ ++ S ED L+V+VLR GAIP RGNV Q MM+PES N I+G + NPW+L RTPGGSSGGEG+LVA++ PLA+G+D+GGSIRIP + G G KPTP R+S +G +DN+ G I +P GPIA VDD L M A C +++ D +P +P+D V
Sbjct: 20 VATATLSSVYVIQNLLRKYDTRKKLRLMAEEAVQRR-----DEKVHKVLEIIASKTLQDDDDSHDDACC-YSALETREGIIRGNISAVDNIIHSVRRCVLYGRKDGQGVNAITEEFYDEGYGEAEKIMLSLLKKQGANEEVLLSEKLLLLGVPISVKDCVAVKGALQTGGLQCRTGEEHRSAEDSLIVRVLRQAGAIPICRGNVSQVMMMPESCNNIWGTTLNPWDLDRTPGGSSGGEGALVATKCVPLAVGTDIGGSIRIPATYCGVVGFKPTPSRLSIEGSMRPRKDNRFGMAITIPAICGPIARSVDDCALFMRAACVPDLFQADPYVPPIPFDDKV 353
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Match: A0A0D2UQ09_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UQ09_CAPO3) HSP 1 Score: 199 bits (506), Expect = 2.920e-54 Identity = 112/258 (43.41%), Postives = 162/258 (62.79%), Query Frame = 1
Query: 247 ELMAAMRNGTLSCERAVAAFCRRARAVGKVKTNSVTEEFYDEAVQAARKVDASGGGDGGGDATASAGLLQGMPMSIKDAMHMKGALTTCGMACKADKGPSKEDGLLVKVLRAHGAIPFVRGNVPQCMMLPESDNAIFGRSDNPWNLGRTPGGSSGGEGSLVASRSTPLALGSDVGGSIRIPCHFTGTCGLKPTPERMSRKGMESLSEDNKGGQRIILPTPGPIANCVDDLELAMTALCSAEMWDGDKRIPRLPWDRTV 1020
EL+ +++ + E+ V +C+RA+ G+ + NS EEF+ EA++ A++ DA G G L G+P+S+KD KGA +TCGMA K PS EDGLLV ++R G IPFVR NVPQ +M+ E+ N I+G + NP+N R GGSSGGEG L+A ++PL LG+DVGGSIR+P ++ G G KPTP+RMS G+ + + GQ+ ILP GP+ CV+DL + M +W+ D +PR+P++ +
Sbjct: 92 ELVQGIQSHRFTSEQIVRTYCQRAKLCGE-RFNSNAEEFFHEAIEEAKEADAYFASTG-----QLKGPLHGIPISVKDQFDQKGADSTCGMAAKCFH-PSAEDGLLVHLIRTAGGIPFVRSNVPQMLMVTETRNDIWGTALNPYNTSRVAGGSSGGEGVLLACAASPLGLGTDVGGSIRVPSNWCGIYGFKPTPQRMSTVGLTN-GMSPQYGQQAILPVAGPMGRCVEDLTIIMKCWWVDALWNRDPYVPRMPFNDAI 341 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6715.17609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6715.17609.1 >prot_Ecto-sp13_S_contig6715.17609.1 ID=prot_Ecto-sp13_S_contig6715.17609.1|Name=mRNA_Ecto-sp13_S_contig6715.17609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=351bp MEANGDAQGVAIAGAALVLVLVLYFARGDNKEKRSQEHWDAVCRRVLRERback to top mRNA from alignment at Ecto-sp13_S_contig6715:2254..7546+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6715.17609.1 ID=mRNA_Ecto-sp13_S_contig6715.17609.1|Name=mRNA_Ecto-sp13_S_contig6715.17609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5293bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6715:2254..7546+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6715:2254..7546+ >mRNA_Ecto-sp13_S_contig6715.17609.1 ID=mRNA_Ecto-sp13_S_contig6715.17609.1|Name=mRNA_Ecto-sp13_S_contig6715.17609.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6715:2254..7546+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |