mRNA_Ecto-sp13_S_contig6709.17600.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A6H5KID3_9PHAE (Rieske domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID3_9PHAE) HSP 1 Score: 714 bits (1843), Expect = 3.520e-255 Identity = 365/404 (90.35%), Postives = 374/404 (92.57%), Query Frame = 1
Query: 4 NHCCLAYSISPRGGITAPTSRPPTLTGTRASPWHAATLGVRGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGLDERQQEDEGKTGVREQEAAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNR---ACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEELAPGEEGFLTKPTGYSGRDMMRVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
NHCCLAYSISPRGGI A TSRPPTL GTR SPWHAAT GVRGREGXXXXXXXXXXXXXXXXXXXXX QAGLDERQ EDEGKTGV+ QEAAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQA DARD AQ SNR ACATVLPT+VVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWG NWYARDLAYG+DTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIE+EELAPGEEGFLTKPTGYSGRD+MRVSFRPPGLVYY+NDYT+ LPF+AK LPPPLR +WAMKK NLDKRVAME TDRDPSDRCLFYFIGYAVPTSPGRCRIFTR
Sbjct: 33 NHCCLAYSISPRGGIKAQTSRPPTLAGTRVSPWHAATPGVRGREGXXXXXXXXXXXXXXXXXXXXX---------QAGLDERQ-EDEGKTGVQGQEAAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQANPDARDIAQNSNRQLMACATVLPTQVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGSNWYARDLAYGFDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIELEELAPGEEGFLTKPTGYSGRDLMRVSFRPPGLVYYENDYTKSLPFMAKGLPPPLRVVYWAMKKFNLDKRVAMERTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 426
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: D7FSH5_ECTSI (Pheophorbide a oxygenase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH5_ECTSI) HSP 1 Score: 481 bits (1238), Expect = 1.460e-164 Identity = 215/308 (69.81%), Postives = 253/308 (82.14%), Query Frame = 1
Query: 289 EAAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEME-ELAPGEEGFLTKPTGYSGRDMMRVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDR-DPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
+A F+W RQWYPV VMRDLEARDPR PYPV+L+GE LVVWKDPKD GWKAF D+CPHRWAPLSEGRV+QE+GRL CIYHGWEFEGDGKCGSIPQAT +R+TAQ S RACAT +PTKVV+GKLW+WPD SPEGVK SE+V P VP LD +GD+GGNWY R LAYG+DTL+ENL DPAH+PFAHHGV+G RA G+PMAIEM+ E GE+ F+TK TGY+G ++MRV F+ PGL+YY++DYTE L K L P RA +W M KL +DKR++M+ DR + SDR L YF+GYAVPTSPG+C IFTR
Sbjct: 37 QAGFQWRRQWYPVAVMRDLEARDPRMPYPVQLMGEGLVVWKDPKDGGWKAFADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEGDGKCGSIPQATPGSRETAQNSKRACATAIPTKVVEGKLWLWPDPSPEGVKESETVPPATVPGLDFGSGDFGGNWYCRKLAYGFDTLIENLADPAHVPFAHHGVMGSRAMGTPMAIEMDKEAGSGEDEFVTKRTGYAGSNVMRVGFKAPGLIYYESDYTETLGTTVKRLAPLFRAIYWFMIKLKIDKRISMKDEDRKERSDRLLSYFVGYAVPTSPGKCMIFTR 344
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A6H5JEZ2_9PHAE (PaO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEZ2_9PHAE) HSP 1 Score: 318 bits (815), Expect = 3.800e-102 Identity = 145/223 (65.02%), Postives = 176/223 (78.92%), Query Frame = 1
Query: 544 DGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEME-ELAPGEEGFLTKPTGYSGRDMMRVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDR-DPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
DGKCGSIPQAT +R+TAQ S RACAT +PTKVV+GKLW+W D SPEGVK SE+V P VP LD +GD+GGNWY R LAYG+DTL+ENL DPAH+PFAHHGV+G RA G+PMAIEM+ E GE+ F+TK TGY+G ++MRV F+ PGL+YY++DYTE L K L PP RA +W M KL +DKR++M+ DR + SDR L YF+GYAVPTSPG+C IFTR
Sbjct: 4 DGKCGSIPQATPGSRETAQSSKRACATAIPTKVVEGKLWLWLDPSPEGVKESETVPPATVPGLDFGSGDFGGNWYCRKLAYGFDTLIENLADPAHVPFAHHGVMGSRAMGTPMAIEMDKEAGSGEDEFVTKGTGYAGSNVMRVGFKAPGLIYYESDYTETLGTTVKRLAPPFRAIYWLMTKLKIDKRISMKDEDRKEKSDRLLSYFVGYAVPTSPGKCMIFTR 226
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A835YYS4_9STRA (Pheophorbide a oxygenase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS4_9STRA) HSP 1 Score: 270 bits (690), Expect = 8.050e-82 Identity = 141/320 (44.06%), Postives = 192/320 (60.00%), Query Frame = 1
Query: 298 FEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEE----LAPGEE------GFLTKPTGYSG--RDM--MRVSFRPPGLVYYKNDYT-EVLPFIAKSLP--PPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
F + R W+PV + DL+ P P V+LLGE+LV+W+D + W+A D+CPHR APLSEG ++ +TG L C YHGWEF+GDG C +IPQAT DA A S RACA +P ++ G +WVWPD+SPEG+ S+ P +V ++DL D+ G WY RD Y YD L+ENL DPAH+PFAHHGVI R G+P+ I ME P + G+L+KP + RD M + F PP L YYK+ YT ++L + + LP PP +A L + + T ++P YF+GY++PT PG+ R+ R
Sbjct: 76 FNYWRAWWPVAIAEDLQ---PDVPERVELLGEALVLWRD-SNKQWRAAVDRCPHRMAPLSEGIIHPKTGNLMCTYHGWEFDGDGTCTNIPQATTDA---AAASRRACAQSVPVQIATGLVWVWPDTSPEGLAESKIKRPAIVADMDLP--DYNGYWYVRDQPYSYDVLIENLGDPAHLPFAHHGVISNRKSGAPLGITMEPPSALFGPDAKNLHANGGYLSKPFAFMPALRDTPNMVMGFEPPTLFYYKSTYTGDMLQDVVRRLPLPPPFKA---------LGRFMVGRDTKKNPDKPLHLYFVGYSIPTMPGKSRLILR 377
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A4D9D3Q0_9STRA (Rieske domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3Q0_9STRA) HSP 1 Score: 239 bits (610), Expect = 5.020e-70 Identity = 131/303 (43.23%), Postives = 173/303 (57.10%), Query Frame = 1
Query: 292 AAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEELAPGEEG-FLTKPTGYSGRDMMRVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRI 1197
A +W RQWYP+ + DL DP +P V+LLG+ V+W D D W AF D+CPHR APLSEGR++ E G L C YHGW F G G C +IPQA + + A++S RACA +P V QG +W+WPD+SP+G++AS S P VP L D G W RDL YGYDTLVEN+VDPAH+PFAHHGV QR+ P+ + + + G+EG FL+ P + + F P ++Y D+T + PL WA + L+K + D P + Y +P PGR RI
Sbjct: 98 APIDWWRQWYPMAFLDDL---DPARPTQVELLGKLFVIWAD-HDKTWHAFEDQCPHRLAPLSEGRID-ERGNLQCAYHGWSFSGQGGCVNIPQAEPEIKVVAERSGRACAKAVPLLVAQGMVWLWPDNSPDGMEASRSQLPSTVPELH-DPAFIRGAWVTRDLMYGYDTLVENVVDPAHVPFAHHGVQAQRSMAMPLNVSLNYV--GKEGVFLSLPRLANST----IEFHAPTRLHYLFDFTGFFQRV------PLMK--WAFR---LEKWLRRLPPDTRPRSS----LVTYTIPVGPGRSRI 373
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A0G4G2L2_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G2L2_VITBC) HSP 1 Score: 228 bits (581), Expect = 1.040e-65 Identity = 124/308 (40.26%), Postives = 172/308 (55.84%), Query Frame = 1
Query: 298 FEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLD----LDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEELAPGEEGFLTKPTGYSGRDMM-RVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
F+W RQWYPV + DL+ + PRQ +L E VVW D + A D CPHR APLSEGR++++ G+LHC YHGWEF+G G C IPQ A A+ A+K+ RAC +P K +W++PDS+ EG AS V P V LD L N G ++ R L Y YDTLVE++ DP+H+PFAHHG+ G R Q P+A++++ L G+ +T G + R+ F PP L+YY+ D + V+ + + L + K+ R R FY + YAVP++PG +FTR
Sbjct: 88 FDWWRQWYPVAIASDLDKKQPRQ---FTVLNEHFVVWWDEATHKFVAAKDACPHRLAPLSEGRISED-GKLHCTYHGWEFDGTGACTKIPQVEAKAQKAARKNKRACLQTVPCKEADSLVWIFPDSTREGWAASTEVEPATVAELDAVPELINRKDDGLFF-RVLHYNYDTLVEDVGDPSHVPFAHHGIQGNRDQAGPIAMKLDNLT-GDGFVVTSLQDLGGAGLTTRIRFMPPCLLYYEFDLSPVVERLKQKPIIKLLSKIGMAPKITKPLRSGKLDGHR-------FYLVAYAVPSAPGESYLFTR 382
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A0G4FEV6_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FEV6_VITBC) HSP 1 Score: 228 bits (582), Expect = 1.370e-65 Identity = 124/319 (38.87%), Postives = 176/319 (55.17%), Query Frame = 1
Query: 280 REQEAAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDL--------DNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEELAPGEEGF-LTKPTGYSGRDMM-RVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
+E F+W RQWYPV + DL + PRQ +L E VVW D + A D CPHR APLSEGR++ + G+LHC YHGWEF+G G C IPQ A A++ A+K+ RAC +P +W++PDS+ EG AS V P V D DNG + R L Y YDTLVEN+ DP+H+PFAHHG+ G R + P+ ++++ L + GF +T G ++ R+ FRPP L+YY+ D++++ + K R + K+ L ++ + D FY + YAVP++PG+ I TR
Sbjct: 85 KEDAGTFDWWRQWYPVAIASDLGKKQPRQ---FTVLNEHFVVWWDEATQKFAAAKDACPHRLAPLSEGRISDD-GKLHCTYHGWEFDGTGACTKIPQVEAKAQEAARKNKRACLQTVPCTEAHALIWIFPDSTREGWAASREVEPATVAEFDTVPELIKTKDNG-----LFFRVLNYNYDTLVENVGDPSHVPFAHHGIQGNRNRAGPIRMKVDNLT--DAGFAVTSIQDLFGTNLTTRIHFRPPCLLYYQIDFSQLAGVLKK------RPIIRLLSKIGLAPKIT-KPVKSGMLDGHKFYLVVYAVPSAPGQSYIITR 385
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A4D9D2T3_9STRA (Rieske domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2T3_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.950e-61 Identity = 127/374 (33.96%), Postives = 177/374 (47.33%), Query Frame = 1
Query: 268 KTGVREQEAAFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWK-----DPKDDG---WKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQA---TADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEELAPG-----------------------EEGFLTKPTGYSGRDM------------------------MRVSFRPPGLVYYKNDYTEVL---PFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
+ G+ + + AF+W +QWYPV + RD++ P + V LLG LV+W+ D K W+ F D+CPHR APLSEGR++ TG L C YHGWEF G G+C IPQ T A +S RACAT LPT QG +WVWPD+S EGV+AS++V P ++ D+D + RD+ YG+DTL+EN +DP+H+PFAHH +I R Q + + +++++ G E+ FLTK M + FRPP L+Y + T +L PF+ P L + YAVP +PGR R+ R
Sbjct: 18 ENGIEDDDDAFDWWKQWYPVALTRDIDGAVPTK---VMLLGRDLVLWREGTAADAKKGAVRTWRCFVDRCPHRLAPLSEGRIDTRTGHLQCAYHGWEFSGSGQCSKIPQTDPETDQEEAGALRSRRACATSLPTLEAQGMIWVWPDTSKEGVEASKAVKPTLMK--DVDEKEMSYLVVCRDMPYGFDTLLENGIDPSHLPFAHHNIISNRNQAAYIDTQVDKIWKGGFDSNQFYPKRGRKPSLPPISVSEQNFLTKDKRADAHRMAACTSELSERFPDRPIAPPTVRVPQSLHFRPPTLLYQVINVTAILDKIPFL--------------------------------PKRERLIRIVTYAVPVAPGRSRVIYR 354
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: A0A0G4GDT7_VITBC (Rieske domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GDT7_VITBC) HSP 1 Score: 214 bits (546), Expect = 3.590e-61 Identity = 128/320 (40.00%), Postives = 178/320 (55.62%), Query Frame = 1
Query: 295 AFEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQATADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNGDWGGNWYARDLA-------YGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEM-EELAPGEEGFLTKPTGYSGR----DMMRVS----FRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFWAMKKLNLDKRVAMEGTDRDPSDRCLFYFIGYAVPTSPGRCRIFTR 1206
+F+W RQWYPV V + L+ R P++ V LL E V+W D + WKA D+CPHR APLSEGR +E G L C YHGW F+GDGKC IPQ ++ +A + RA V+P ++ QG LW++PDS+ EG +AS+SV P VP +LD+G G +RD Y +DTL+ENLVDP+H+P+AHHG+ G R + P+ ++ +L G GF G+ D + + F+PP LV Y + V + + L + L L RVA TD R +FY I YA+P PG+ + +R
Sbjct: 8 SFDWGRQWYPVSVAKHLDKRLPQK---VTLLSEHFVLWWDKQHQAWKAAKDQCPHRLAPLSEGRFTEE-GHLQCTYHGWHFDGDGKCRGIPQIEEVSKCSALDNPRAHLEVVPCQLKQGILWIFPDSTAEGREASQSVQPATVP--ELDDGP-PGLVASRDTGLKRTIVHYNWDTLIENLVDPSHVPWAHHGIQGDRKKSRPIPLQRASKLETG--GFTVSSKATLGQLRSGDPVEIDNTIRFKPPCLVMYAFNLAGVGKMLREKFIVRLLCS------LGLGPRVAALDTD----GRNMFYLILYAIPIEPGKSMVLSR 308
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Match: I0YYD6_COCSC (ISP domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YYD6_COCSC) HSP 1 Score: 209 bits (533), Expect = 2.710e-59 Identity = 115/277 (41.52%), Postives = 156/277 (56.32%), Query Frame = 1
Query: 286 QEAA----FEWTRQWYPVVVMRDLEARDPRQPYPVKLLGESLVVWKDPKDDGWKAFTDKCPHRWAPLSEGRVNQETGRLHCIYHGWEFEGDGKCGSIPQAT-ADARDTAQKSNRACATVLPTKVVQGKLWVWPDSSPEGVKASESVAPVVVPNLDLDNG----DWG-----GNWYARDLAYGYDTLVENLVDPAHIPFAHHGVIGQRAQGSPMAIEMEELAPGEEGF-LTKPTGYSGRDMMRVSFRPPGLVYYKNDYTEVLPFIAKSLPPPLRAAFW 1071
QEAA F+W RQWYP+ + DL DP +P+ ++LLG+ LV+W D + W AF D+CPHR APLSEGR+ G L C YHGW F GDG C IPQA A A DTA S R+CA V PT+V QG +WVW D S S + P+++P L D+ D G + YARDL Y +D LVEN +DP+H+ FAHHGV G R + + + E++P + G + P D+ +F G K ++++ F+ + P R +W
Sbjct: 38 QEAANGGTFDWARQWYPLAFVEDL---DPGRPHAMELLGKRLVIWYDSRQHKWTAFEDRCPHRLAPLSEGRIEPSDGTLMCSYHGWRFRGDGACTRIPQALDARAEDTACSSGRSCAAVHPTQVSQGYVWVWGDCSASAAAESALMPPLLIPELSPDDTGQATDGGPVISAASRYARDLPYSWDVLVENFLDPSHVSFAHHGVQGNRESEN---VGVFEISPTDRGDPMHPPQEAISMDVKSAAFGTRG---GKVKWSQMPMFVVPTGPGRSRVLWW 305 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6709.17600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6709.17600.1 >prot_Ecto-sp13_S_contig6709.17600.1 ID=prot_Ecto-sp13_S_contig6709.17600.1|Name=mRNA_Ecto-sp13_S_contig6709.17600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=402bp QNHCCLAYSISPRGGITAPTSRPPTLTGTRASPWHAATLGVRGREGGGGAback to top mRNA from alignment at Ecto-sp13_S_contig6709:61..7025- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6709.17600.1 ID=mRNA_Ecto-sp13_S_contig6709.17600.1|Name=mRNA_Ecto-sp13_S_contig6709.17600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6965bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6709:61..7025- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6709:61..7025- >mRNA_Ecto-sp13_S_contig6709.17600.1 ID=mRNA_Ecto-sp13_S_contig6709.17600.1|Name=mRNA_Ecto-sp13_S_contig6709.17600.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1206bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6709:61..7025- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |