prot_Ecto-sp13_S_contig6706.17598.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6706.17598.1
Unique Nameprot_Ecto-sp13_S_contig6706.17598.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length426
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6706.17598.1 vs. uniprot
Match: D7FMW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW0_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 1.300e-88
Identity = 243/335 (72.54%), Postives = 255/335 (76.12%), Query Frame = 0 
Query:   84 MSNGETVRICHGICAMGEETGRQSSLRCDESSPSSPQPTKRDMQTKMRKRRPRDVQPIPRRSKRIRNKIAAAAAAISAPDAVVISDNPRTNDQINHDQVAAATGTPRSPMVSNTTTNCEGRKRGKLQDTEDEKHRGSSVGIGRASRRTNENMCSFNALGKQEVPRGSFFDEEKGFTRTELMKASGCTDDSTPYQMASAIGRPPSPMDEPSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKLSTTTQPELLPAFLLAFLKDDLILDADGEEGWVMDAKEGKEMDAVEAVQDTVP 418
            MSNGETVRI HGICAMGEETG Q SLR DESS  SPQPT+RDMQT+ RK RPRD QPIPRRSKRIRNKIAAAAAAISAPDAVVI+DN + NDQ N DQVAAA GTP SPM                                             + +GKQE P   FFDEE   TRTELM+   CTDDS PYQ+ASAIGRPPS M     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG +STTTQP+LLPAFLLAFLKDDLILDADGEEGWVMDAKEGK MDAV+A+QDTVP
Sbjct:    1 MSNGETVRISHGICAMGEETGHQYSLRWDESSLPSPQPTERDMQTQKRKHRPRDAQPIPRRSKRIRNKIAAAAAAISAPDAVVINDNAKDNDQSNPDQVAAAIGTPWSPM---------------------------------------------HGIGKQEEPSDRFFDEENALTRTELMEVYRCTDDSKPYQVASAIGRPPSRMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGNISTTTQPDLLPAFLLAFLKDDLILDADGEEGWVMDAKEGKVMDAVKAIQDTVP 290
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6706.17598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMW0_ECTSI1.300e-8872.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6706contigEcto-sp13_S_contig6706:2667..5304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6706.17598.1mRNA_Ecto-sp13_S_contig6706.17598.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6706 2277..5370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6706.17598.1 ID=prot_Ecto-sp13_S_contig6706.17598.1|Name=mRNA_Ecto-sp13_S_contig6706.17598.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp
MYITVKHPHRAMMNEVQEHDYAAAIQPKPPTNENTTSRTSITLTLVRVTH
TATSALSFPLFHLAQGSLGNSTPVSQSFEGVVKMSNGETVRICHGICAMG
EETGRQSSLRCDESSPSSPQPTKRDMQTKMRKRRPRDVQPIPRRSKRIRN
KIAAAAAAISAPDAVVISDNPRTNDQINHDQVAAATGTPRSPMVSNTTTN
CEGRKRGKLQDTEDEKHRGSSVGIGRASRRTNENMCSFNALGKQEVPRGS
FFDEEKGFTRTELMKASGCTDDSTPYQMASAIGRPPSPMDEPSVNFFDEK
KAPTPTELMEVSRCTDDSKSDQAASAIGMPLSPMQEPSDSCFDETTALTS
MDLMEASRCTDDEGKLSTTTQPELLPAFLLAFLKDDLILDADGEEGWVMD
AKEGKEMDAVEAVQDTVPCKTHGNI*
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