mRNA_Ecto-sp13_S_contig6700.17593.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6700.17593.1
Unique NamemRNA_Ecto-sp13_S_contig6700.17593.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: A0A6H5JPQ4_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPQ4_9PHAE)

HSP 1 Score: 1150 bits (2975), Expect = 0.000e+0
Identity = 569/635 (89.61%), Postives = 604/635 (95.12%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANALVPAENGGLLADEGLVDADVAADVAIDEAEEDGLL 1905
            + +YVDSAG+PYLSG AGDQENAAVLSYTGADGHEELHVFNTIGWFD GAWPWAHFYNEWATKGIFMGERRFYL AVVDDLFLSTPEFEY+G MNEAAVAQRCTG+DLSNLL VQQ+LNTQY GS+IITEFAFNGGGIAEHVSQSV+GITYVP YEETMVT KGTKW+EDG+ INVHDTNWL TNVPLMQQDMADGTWEAND+LL  VIS+LDT STFYHGHHTLIHLSRDQLR++DC TEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTT ++NGYDG QIVPRFAT+VYFNCV+G CLV ENEYIRRFVCECTPLDPSIAD+ C+STADEC+ +DGATDIQS G IEA+F  EA TTTRYMLTGRRDKYMFHQANIIPAGDVGDG+QSLL+YWYERVLEVFSSY+TFPVKSIKFDDLCTEFTLHEALD+SSPYVTMALD TGAVTGL+YVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTV RVG+KPDASELAEVPLPVLESV GDASAT +PAEIVENAEELAENQEANALVPAENGGLLAD+GLVDA+VAA VAI+EAEE+GL+
Sbjct:  452 LAQYVDSAGDPYLSGFAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYNGEMNEAAVAQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQSVDGITYVPEYEETMVTTKGTKWYEDGQ-INVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLDTASTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTVADNGYDGVQIVPRFATYVYFNCVTGDCLVKENEYIRRFVCECTPLDPSIADFMCSSTADECLDSDGATDIQSFGDIEALFDAEAFTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFSSYVTFPVKSIKFDDLCTEFTLHEALDNSSPYVTMALDATGAVTGLTYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVSRVGAKPDASELAEVPLPVLESVVGDASATLSPAEIVENAEELAENQEANALVPAENGGLLADQGLVDAEVAAGVAIEEAEEEGLI 1085          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: D7FLJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ3_ECTSI)

HSP 1 Score: 1128 bits (2918), Expect = 0.000e+0
Identity = 572/635 (90.08%), Postives = 583/635 (91.81%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANALVPAENGGLLADEGLVDADVAADVAIDEAEEDGLL 1905
            + +YVDSAGEPYLSG AGDQENAAVLSYTGADGHEELHVFNTIGWFD GAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAV+QRCTG DLS LL VQQ+LNTQY GSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDG+ INVHDTNWL TNVPLMQQDMADGTWEANDDLLVE                         LR+TDC TEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECV  DGATDIQSLGSIEA+F  EASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLL+YWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSI+DTETYGTDTTYYLKDDDASTVPRVG+KPDASELAEVPLPV ESVEGDASATETPAE            EANALVPAENGGLLADEGLVDADVAADVAI+EAEEDGLL
Sbjct:  450 LAQYVDSAGEPYLSGAAGDQENAAVLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVSQRCTGDDLSQLLSVQQALNTQYSGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGQ-INVHDTNWLATNVPLMQQDMADGTWEANDDLLVE-------------------------LRETDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVDDDGATDIQSLGSIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLDYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIEDTETYGTDTTYYLKDDDASTVPRVGTKPDASELAEVPLPVAESVEGDASATETPAEXXXXXXXXXXXXEANALVPAENGGLLADEGLVDADVAADVAIEEAEEDGLL 1058          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: D7FLJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ1_ECTSI)

HSP 1 Score: 1123 bits (2904), Expect = 0.000e+0
Identity = 560/635 (88.19%), Postives = 594/635 (93.54%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANALVPAENGGLLADEGLVDADVAADVAIDEAEEDGLL 1905
            + +YVDS  EPYLSG AGDQENAA+LSYTGADGHEELHVFNTIGWFD GAWPWAHFYNEWATKGIFMGERRFYL AVVDDLFLSTPEFEYDG +NEAA++QRCTG+DL+NLL VQQSLN  Y GS+IITEFAFNGGGIAEHVSQ+VE ITYVP+YEETMVT KGT+W+EDG+ INVHDTNWL TNVPLMQQDMADGTWEAND+LLV VIS+LDT STFYHGHHTLIHLSRDQLR+TDC TED+GNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGA ILVNEDNQFHSIY+T ++NGYDG QIVPRFAT+VYFNCV+GSCLVNENEYIRRFVC CTPLDPSIADYTCTSTADECV  DGA DIQS G IEA+F  EASTTTRYMLTGRRDKYMFHQANIIPAGDVGDG+QSLL+YWYERVLEVFSSY+TFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALD TGAVTGLSYVSGSGAGLVPLTVPTASAASIPTT LSIQDTETYGTDTTYYLKDDDASTV RVG+KPDAS+LAEVPL V+E+   DASAT +PAEIVENAEELAENQE NALV AENGGLLAD+GLVDADVAA VAID AEE+GLL
Sbjct:  272 LAQYVDSDSEPYLSGAAGDQENAAMLSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLTNLLSVQQSLNALYAGSDIITEFAFNGGGIAEHVSQAVENITYVPDYEETMVTTKGTQWYEDGQ-INVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTSSTFYHGHHTLIHLSRDQLRETDCVTEDSGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGATILVNEDNQFHSIYSTVADNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCGCTPLDPSIADYTCTSTADECVDDDGAPDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFSSYVTFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDATGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTDLSIQDTETYGTDTTYYLKDDDASTVSRVGTKPDASDLAEVPLIVVET---DASATLSPAEIVENAEELAENQETNALVAAENGGLLADQGLVDADVAAGVAIDAAEEEGLL 902          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: D7FLI7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI7_ECTSI)

HSP 1 Score: 1095 bits (2831), Expect = 0.000e+0
Identity = 538/630 (85.40%), Postives = 582/630 (92.38%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANALVPAENGGLLADEGLVDADVAADVAIDEAE 1890
            + +YVD   EPYLSG AGDQENAA+LSYTGADGHEELHVF TIGWFD GAWPWAHF+NEWATKGIFMGERRFYL AVVDDLFLSTPEFEYDG MNEAA++QRCTG+DL+NLL VQ++LNTQY GS+IITEFAFNG GIAEHVSQSV+GITYVPNYEETMVT+KGTKW+EDG+ +NVHDTNWL TNVPLMQQDMADGTWEANDDLL  V+S+L  PS+FYHGHHTLIHLSRDQLR++DC TEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIY+T + NGYDG QIVPRFAT+VYFNCV+G CLV ENEYIRRFVCECTPLDPSIADYTCTSTA EC+GTDGATDIQS G IEA+F  EASTTTRYMLTGRRDKYMFHQAN+IPAGDVGDG+QSLL+YWYERVLEV+SSY+TFPVKSIKFDDLCTEF LHE+LD+SSPYVTM LD TGAVTG +YVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVG+KPDA +LAEVP  V E V    +ATE+PA++VENA+ LAENQEANALVPAEN G L ++GLVDADVAADV IDE E
Sbjct:  252 LAQYVDGDSEPYLSGAAGDQENAAMLSYTGADGHEELHVFFTIGWFDAGAWPWAHFFNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGEMNEAALSQRCTGEDLTNLLRVQEALNTQYSGSDIITEFAFNGAGIAEHVSQSVDGITYVPNYEETMVTIKGTKWYEDGQ-VNVHDTNWLATNVPLMQQDMADGTWEANDDLLAGVLSYLYKPSSFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYSTVAINGYDGIQIVPRFATYVYFNCVTGDCLVKENEYIRRFVCECTPLDPSIADYTCTSTAAECIGTDGATDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANVIPAGDVGDGTQSLLDYWYERVLEVYSSYVTFPVKSIKFDDLCTEFKLHESLDESSPYVTMGLDATGAVTGFNYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGTKPDAGDLAEVPPFVTEEV---ITATESPADVVENADNLAENQEANALVPAENFGNLGEDGLVDADVAADVVIDEGE 877          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI)

HSP 1 Score: 1015 bits (2624), Expect = 0.000e+0
Identity = 512/635 (80.63%), Postives = 549/635 (86.46%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANALVPAENGGLLADEGLVDADVAADVAIDEAEEDGLL 1905
            + +Y DSAGEPYLSG AGDQENAA+LSYTGADGHEELHVFNTIGWFD GAWPWAHFYNEWATKGIFMGERRFYL AVVDDLFLSTPEFEYDG MNEAAVAQRCTG+DL+NLL VQQ+LNTQY GS+IITEFAFNGGGIAEHVSQ+V+GITYVP+YEETMVT+KGTKW+EDG+ INVHDTNWL TNVPLMQQDMADGTWEAND+LLV VIS+LDTPST YHGHHTLIHLSRDQLR+TDC  +DT                                      AAQNLMVCYPGDNTFDGTVSGA ILVNEDNQFHSIY+T +NNGYDG QIVPRFAT+VYFNCV+GSCLVNENEYIRRFVCECTPLDPSIADY+C STADEC+GTDGATDIQS G IEA+F  EASTTTRYMLTGRRDKYMFHQANIIPAGDVGDG+QSLL+YWYERVLEV+SSYITFPVK+IKFDDLCTEF LHEALDDSSPYVTMALD TGAVTG +YVSGSGAGLVPLTVPTASAASIPTTGLSIQD+ETYGTDTTYYLKDDDAST+PRVG+KPDAS                  AT++PAEIV NAEELAENQEANALVPAE+  LLAD+GLVDADVAADVAI  AEE+GLL
Sbjct:  555 LAQYADSAGEPYLSGAAGDQENAAILSYTGADGHEELHVFNTIGWFDAGAWPWAHFYNEWATKGIFMGERRFYLAAVVDDLFLSTPEFEYDGDMNEAAVAQRCTGEDLTNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVDGITYVPDYEETMVTIKGTKWYEDGQ-INVHDTNWLATNVPLMQQDMADGTWEANDELLVAVISYLDTPSTIYHGHHTLIHLSRDQLRETDCVADDT--------------------------------------AAQNLMVCYPGDNTFDGTVSGATILVNEDNQFHSIYSTVANNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCECTPLDPSIADYSCASTADECIGTDGATDIQSFGDIEALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVYSSYITFPVKNIKFDDLCTEFKLHEALDDSSPYVTMALDATGAVTGFNYVSGSGAGLVPLTVPTASAASIPTTGLSIQDSETYGTDTTYYLKDDDASTIPRVGTKPDAS------------------ATQSPAEIVANAEELAENQEANALVPAEHSDLLADQGLVDADVAADVAITAAEEEGLL 1132          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: A0A6H5JW45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW45_9PHAE)

HSP 1 Score: 954 bits (2466), Expect = 0.000e+0
Identity = 490/596 (82.21%), Postives = 525/596 (88.09%), Query Frame = 1
Query:  199 MGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELI---------------------NVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANALVPAENGGLLADEGLVDAD------VAADVAIDEAEEDGLL 1905
            +GERRFYL AVVDDLFLSTPEFEYDG +NEAA++QRCTG+DLSNLL VQQ+LNTQY GS+IITEFAFNGGGIAEHVSQ+VE ITYVP YEETMVT KGT+W+EDGELI                     NVHDTNWL TNVPLMQQDMADGTWEAND+LL  VIS+L T STF+HGHHTLIHLSRDQLR+TDC TEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNT+DGTVSGA +LVNEDNQFHSIY+T ++NGYDG QIVPRFAT+VYFNCV+GSCLVNENEYIRRFVC CTPLDPSIADY      +ECV  D ATDIQS G I+A+F  EASTTTRYMLTGRRDKYMFHQANIIPAGDVGDG+QSLL+YWYERVLEVF+SY+TFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALD TGAVTGL+YVSGSGAGLVPLTVPTASAASIPTT LSIQDTETYGTDTTYYLKDDDASTVPRVG+KPDASELAEVP  V+E+   DA AT +PAEIVENAEELAENQE NALVPAENGGLLAD+GLVDA       VAA  AID AEE+GLL
Sbjct:   54 VGERRFYLAAVVDDLFLSTPEFEYDGVLNEAALSQRCTGEDLSNLLSVQQALNTQYSGSDIITEFAFNGGGIAEHVSQAVENITYVPEYEETMVTTKGTRWYEDGELIDFVLFLEGRSLDPSKTSTGQINVHDTNWLATNVPLMQQDMADGTWEANDELLAAVISYLGTSSTFFHGHHTLIHLSRDQLRETDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTYDGTVSGATLLVNEDNQFHSIYSTVADNGYDGIQIVPRFATYVYFNCVTGSCLVNENEYIRRFVCGCTPLDPSIADYV-----NECVDDDDATDIQSFGDIDALFDAEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGTQSLLDYWYERVLEVFASYVTFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDATGAVTGLTYVSGSGAGLVPLTVPTASAASIPTTDLSIQDTETYGTDTTYYLKDDDASTVPRVGTKPDASELAEVPSIVVET---DAGATLSPAEIVENAEELAENQETNALVPAENGGLLADQGLVDAXXXXXXXVAAGEAIDAAEEEGLL 641          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE)

HSP 1 Score: 728 bits (1878), Expect = 6.840e-255
Identity = 352/401 (87.78%), Postives = 360/401 (89.78%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGS-----------------------------CLVNENEYIRRFVCECTPLDPSIADY 1116
            + RYVDSAG+PYLSG  GDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGG NEAAVAQRCTGQDLSNLLGVQQSLNTQY GSEIITEFAFNGGGIAEHVSQSVE I+YVPNYEETMVTLKGTKWFEDG+ INVHDTNWL TNVPLMQQDMADGTWEANDDLL EVISHLDTPSTFYHGHHTLIHLSRDQLR++DC TEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAIL+NEDNQFHSIYTT SNNGYDG QIVPRFATFVYFNCVSG+                             CLVNENEYIRRFVCECTPLDPSIADY
Sbjct:  317 ITRYVDSAGDPYLSGAGGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGTNEAAVAQRCTGQDLSNLLGVQQSLNTQYSGSEIITEFAFNGGGIAEHVSQSVEDISYVPNYEETMVTLKGTKWFEDGQ-INVHDTNWLATNVPLMQQDMADGTWEANDDLLAEVISHLDTPSTFYHGHHTLIHLSRDQLRESDCVTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILINEDNQFHSIYTTVSNNGYDGGQIVPRFATFVYFNCVSGTQLPCCAMIARPVSIFVHLVYFPFPGASFQCLVNENEYIRRFVCECTPLDPSIADY 716          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: A0A6H5K3S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S3_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.890e-152
Identity = 269/568 (47.36%), Postives = 353/568 (62.15%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIP-------------AG------------------------DVGDGSQSLLEYWYERVLEVFSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDE-TGAVTGLSYVSGSGAGLVPLTVPTASAASIPTTGLSIQDT 1590
            M  YVD +G    S ++    + A ++Y   DG+EELH+F ++ WFDTG+W WAHF+ EW TKG+F GERRFYL  +VDDLFL+T  FEYDG  NE A   R T  D+S     + SLN+QY GS I+TE+ FNG GI   V+ +   +  + N +  ++  KG +   DG +       WL T VP M  + A G+W + D LL  V+++LDT   F+   HTL HL+RD L ++DC  ED GN QIA++TGM++SDNYNWRS+ SPGITGLFN+ CL SA  NLM C PGDNT+DG  +  + L++  +QFHSIYTT SNNG+ G QIVPR+ATFVYFNC +G CLVNENE+IRR  C C+ L+P+    +C S  D         DIQS GS+EA++ TEA TTTR +L GRRDKYMFHQA+I+P             AG                        +      SLL YWY+ V+++ S +I+FPV S KFDD CTEF LHE LD S   +T  +D  +G ++G+S  +   AG++PLTVP  S  +IPT GL++  T
Sbjct:  202 MAEYVDDSGANVPSSLS--FPSVAAMAYASNDGYEELHLFFSVAWFDTGSWAWAHFFIEWGTKGVFQGERRFYLAGMVDDLFLATGVFEYDGDTNEGAEV-RLTSSDMSAFASFESSLNSQY-GSSIVTEWPFNGLGILNVVNSAF--VLDIANADIALLP-KGQQVNGDG-IDPQLPVGWLATAVPGMTAEFAAGSW-STDGLLGWVLANLDT---FWWQSHTLSHLARDDLGESDCSIEDGGNAQIAVLTGMFNSDNYNWRSLTSPGITGLFNKFCLTSATSNLMTCAPGDNTYDGVQTDVS-LISSVSQFHSIYTTESNNGFSGFQIVPRYATFVYFNCATGDCLVNENEFIRRKTCGCSNLNPAEDKGSC-SLCD---------DIQSFGSVEALYETEAKTTTRQILMGRRDKYMFHQASIVPYCPTFHPPTIRLLAGFPIFVPHTLVAXXXXXXXXXXXVQNSAVPGGSLLAYWYQEVMKLLSQFISFPVTSKKFDDHCTEFGLHEDLDSSEALLTATVDNVSGEISGISLSASGTAGVIPLTVP--STLTIPTAGLTVGST 744          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: D7G022_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G022_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 7.360e-150
Identity = 305/669 (45.59%), Postives = 389/669 (58.15%), Query Frame = 1
Query:    1 MCRYVDSAGEPY---LSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWL------VTNVPLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQS----LGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQ------------SLLEYWYERVLEVFSSYI---TFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGL-VPLTVPTASAASIPTT--GLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAE--IVENAEELAENQEANALVP-AENGGLLADE-----GLVDADVAADVAIDEAE 1890
            + +Y D  G+     L+GV   Q +AA++ Y GADG EE+HVF ++ WFDTG+W W HF +EW T+GIF GERRFYLG VVDDLFLST  + YD   +     +R +G DL      + + NT+Y G+ + TE AFNG G+ + V  +    ++V    +  +  KG        +  + D NWL            MQ D   G + ++DDLL  V + LD    F+   HTL HLSRD L   DC  ED GNV++ +M GM+D+DNYNWRSM SPGITGLFN NCL S  +NLM CYPGDNT+ G    A  L+NE+NQFHS+ TT   NGY G QIVPRFAT VY+NCV+G CL++ENE IRR VC C  L+P+    TC++      GT    D+ S    +G +EA+F TE  TTTRY+LTGRRDKYMFHQAN+I      D S             SLLEYWY RVL   S YI   +FP++++KFD+LC  F  HE LD S   +T   D +GA+TG S  + S  G  +PLTVPTASAA I  T   L    TETYG DTTY       +T     SKPD SELA +P            AT TPAE  IVE+A E     E +++V  AE+  +  +E     G V  D+A ++ +D  E
Sbjct:  758 LAQYADDNGDAIGGVLAGVTNPQ-SAAIVEYIGADGLEEMHVFISLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPP-SFFGPEERLSGADLQKFQNSEAAFNTEY-GASVKTEHAFNGLGVLDKVGSTRR--SWVGAAADMGLLPKGDPPNPSTGIPQISDPNWLSIQFNPAAGEQGMQDDYDAGLF-SSDDLLARVQADLDA---FFWQSHTLTHLSRDNLGKNDCDIEDGGNVRLGVMFGMFDNDNYNWRSMTSPGITGLFNPNCLQSGDENLMKCYPGDNTYSGAPLTAVSLINENNQFHSMTTTVGTNGYAGMQIVPRFATNVYYNCVTGQCLIDENEKIRRDVCGCADLNPANPQGTCSACPS---GTQSFNDVASSDPSIGPLEALFQTEERTTTRYILTGRRDKYMFHQANVISTTWTTDTSDPMYVSPRPTNDPSLLEYWYIRVLAEMSKYINTGSFPIQTLKFDNLCHNFYQHEDLDSSGAVLTATKDPSGAITGFSLETSSDNGAPIPLTVPTASAAEILATLGTLLPSKTETYGADTTYTFAAGTLNT--GTLSKPDVSELAPIP-----------QATLTPAEQEIVEDAAEAELEAEVSSIVDVAEDARVDIEEEAGNQGFVVEDLAGEILVDPVE 1401          
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Match: D7G056_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G056_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 7.130e-149
Identity = 300/672 (44.64%), Postives = 384/672 (57.14%), Query Frame = 1
Query:    1 MCRYVDSAGEPYLSGVAG--DQENAAVLSYTGADGHEELHVFNTIGWFDTGAWPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVAQRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGITYVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNV-----PLMQQDMADGTWEANDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIALMTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTVSGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVNENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQS----LGSIEAVFHTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQ------------SLLEYWYERVLEVFSSYI---TFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYVSGSGAGL-VPLTVPTASAASIPTT----GLSIQDTETYGTDTTYYLKDDDASTVPRVGSKPDASELAEVPLPVLESVEGDASATETPAE--IVENAEELAENQEANALVPA---------ENGGLLADEGLVDADVAADVAIDEAE 1890
            M +Y D  G+     +AG  + E+AA++ Y G DG EE+HVF ++ WFDTG+W W HF +EW T+GIF GERRFYLG VVDDLFLST  + YD   +     +R +G DL      + + NT Y G+ + TE AFNG G+ + V  +    ++V    +  +  KG        +  + D NWL T        L  QD  D     +DDLL  V + LD    F+   HT+ HL+RD L   DC  ED GNV++A+M GM+D+DNYNWRSM SPGITGLFN NCL S  +NLM CYPGDNT+ G       L+NE+NQFHS+ TT   NGY G QIVPRFAT VY+NCV+G CL++ENE IRR VC CT L+P+    TC++      GT    DI S    +G +EA+F TE  TTTRY+LTGRRDKYMFHQAN+I      D S             SLLEYWY RVL   + +I   +FP++++KFD+LC  F  HE LD S   +T   D +GA+TG S  + S  G  +PLTVPTASAA I        LS   TETYG DTTY       +T     SKPD SEL  +P            AT TPAE  +VE A E    +E +++V           E  G   ++G V  D+A ++ +D  E
Sbjct:  771 MAQYADENGDVIAGVLAGVTNPESAAIVEYIGTDGLEEMHVFVSLAWFDTGSWAWGHFISEWGTRGIFQGERRFYLGGVVDDLFLSTGVWIYDPP-SFFGPEERLSGADLQKFQNSEAAFNTAY-GASVKTEHAFNGLGVLDKVGSTRR--SWVGADADIGLLPKGDPPNPSTGIPQISDPNWLSTQFNPADGELGMQDDYDAGLFDSDDLLARVQADLDA---FFWQSHTMTHLARDNLGKNDCDIEDGGNVRMAIMFGMFDNDNYNWRSMTSPGITGLFNPNCLQSGDENLMKCYPGDNTYSGPPLTDVFLINENNQFHSLTTTVGTNGYAGMQIVPRFATNVYYNCVTGQCLIDENEKIRRDVCGCTDLNPANPQGTCSACPS---GTQSFNDIASSDPSIGPLEALFQTEERTTTRYILTGRRDKYMFHQANVISTTWTTDTSDPMYVSPRPTNNPSLLEYWYIRVLAEMARFINTGSFPIQTLKFDNLCHNFYQHEDLDSSGAVLTATKDPSGAITGFSLETSSNNGAPIPLTVPTASAAEIDLILAAGTLSASATETYGADTTYTFAAGTLNT--GTLSKPDVSELPTIP-----------QATLTPAEQEVVEEAAEAELEEEISSIVDVAEDAREDIEEEAG---NQGFVVEDLAGEILVDPVE 1416          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6700.17593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPQ4_9PHAE0.000e+089.61WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLJ3_ECTSI0.000e+090.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLJ1_ECTSI0.000e+088.19Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FLI7_ECTSI0.000e+085.40WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FLI8_ECTSI0.000e+080.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW45_9PHAE0.000e+082.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQ44_9PHAE6.840e-25587.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3S3_9PHAE1.890e-15247.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G022_ECTSI7.360e-15045.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G056_ECTSI7.130e-14944.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6700contigEcto-sp13_S_contig6700:1132..7955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1161.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FLJ0
Model size1908
Hectar predicted targeting categoryother localisation
Exons12
EggNOG OGs28IRF@1,2QR2R@2759
Cds size1908
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6700.17593.1prot_Ecto-sp13_S_contig6700.17593.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6700 1132..7955 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463921.8524005-CDS-Ecto-sp13_S_contig6700:1131..13631681463921.8524005-CDS-Ecto-sp13_S_contig6700:1131..1363Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 1132..1363 -
1681463921.8626285-CDS-Ecto-sp13_S_contig6700:2147..22661681463921.8626285-CDS-Ecto-sp13_S_contig6700:2147..2266Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 2148..2266 -
1681463921.8720837-CDS-Ecto-sp13_S_contig6700:2693..28701681463921.8720837-CDS-Ecto-sp13_S_contig6700:2693..2870Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 2694..2870 -
1681463921.8812149-CDS-Ecto-sp13_S_contig6700:3007..31401681463921.8812149-CDS-Ecto-sp13_S_contig6700:3007..3140Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 3008..3140 -
1681463921.890364-CDS-Ecto-sp13_S_contig6700:3585..37161681463921.890364-CDS-Ecto-sp13_S_contig6700:3585..3716Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 3586..3716 -
1681463921.8992016-CDS-Ecto-sp13_S_contig6700:3980..40581681463921.8992016-CDS-Ecto-sp13_S_contig6700:3980..4058Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 3981..4058 -
1681463921.908082-CDS-Ecto-sp13_S_contig6700:4553..46211681463921.908082-CDS-Ecto-sp13_S_contig6700:4553..4621Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 4554..4621 -
1681463921.9169922-CDS-Ecto-sp13_S_contig6700:5335..55751681463921.9169922-CDS-Ecto-sp13_S_contig6700:5335..5575Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 5336..5575 -
1681463921.9259233-CDS-Ecto-sp13_S_contig6700:5845..60561681463921.9259233-CDS-Ecto-sp13_S_contig6700:5845..6056Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 5846..6056 -
1681463921.934907-CDS-Ecto-sp13_S_contig6700:6646..67421681463921.934907-CDS-Ecto-sp13_S_contig6700:6646..6742Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 6647..6742 -
1681463921.9443092-CDS-Ecto-sp13_S_contig6700:7081..73031681463921.9443092-CDS-Ecto-sp13_S_contig6700:7081..7303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 7082..7303 -
1681463921.9536-CDS-Ecto-sp13_S_contig6700:7754..79551681463921.9536-CDS-Ecto-sp13_S_contig6700:7754..7955Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6700 7755..7955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6700.17593.1

>prot_Ecto-sp13_S_contig6700.17593.1 ID=prot_Ecto-sp13_S_contig6700.17593.1|Name=mRNA_Ecto-sp13_S_contig6700.17593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=636bp
MCRYVDSAGEPYLSGVAGDQENAAVLSYTGADGHEELHVFNTIGWFDTGA
WPWAHFYNEWATKGIFMGERRFYLGAVVDDLFLSTPEFEYDGGMNEAAVA
QRCTGQDLSNLLGVQQSLNTQYPGSEIITEFAFNGGGIAEHVSQSVEGIT
YVPNYEETMVTLKGTKWFEDGELINVHDTNWLVTNVPLMQQDMADGTWEA
NDDLLVEVISHLDTPSTFYHGHHTLIHLSRDQLRDTDCFTEDTGNVQIAL
MTGMWDSDNYNWRSMVSPGITGLFNENCLDSAAQNLMVCYPGDNTFDGTV
SGAAILVNEDNQFHSIYTTTSNNGYDGAQIVPRFATFVYFNCVSGSCLVN
ENEYIRRFVCECTPLDPSIADYTCTSTADECVGTDGATDIQSLGSIEAVF
HTEASTTTRYMLTGRRDKYMFHQANIIPAGDVGDGSQSLLEYWYERVLEV
FSSYITFPVKSIKFDDLCTEFTLHEALDDSSPYVTMALDETGAVTGLSYV
SGSGAGLVPLTVPTASAASIPTTGLSIQDTETYGTDTTYYLKDDDASTVP
RVGSKPDASELAEVPLPVLESVEGDASATETPAEIVENAEELAENQEANA
LVPAENGGLLADEGLVDADVAADVAIDEAEEDGLL*
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mRNA from alignment at Ecto-sp13_S_contig6700:1132..7955-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6700.17593.1 ID=mRNA_Ecto-sp13_S_contig6700.17593.1|Name=mRNA_Ecto-sp13_S_contig6700.17593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6824bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6700:1132..7955- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCAGGTATGTCGACAGTGCCGGCGAGCCCTACCTCTCCGGGGTCGC GGGTGACCAGGAAAACGCTGCGGTGCTCAGCTACACCGGTGCCGACGGCC ACGAGGAGTTGCACGTCTTCAACACCATCGGCTGGTTTGACACCGGCGCG TGGCCGTGGGCGCATTTCTACAACGAGTGGGCCACCAAGGGCATCTTCAT GGTACGTGTTTTGTCATGATGGTGCTCTGCTGATGCCATCGTCACCGTTC ACGGTCTACGACGCTGATGCGACCGTTCTGTAGCGATTCCCACAGGATGT AGGTCTGGACGCTCGTGAGAGTAGAGTGAAACCCGAAAATCTGTTTGTCG TTTCCAGGATAATGGCTGGCGTCAGTCGATGGTGATAAAATGATGCTGCC CACTCGCAGCAGCAGGACTACTACTACCCTATCGCCGACCCCATGGGCCT ATTCATGTCGCCCACAACACATACATGTTCTGAGACTCGATAGTTGGTAC CATAAAGCCCAACTTACCCGGAGTAGGGACAACACTCAATCTCTAGAGAG ACGCGCGGTTGTGGTCGTAAGCAGTCAGATGATTGAATGGCGAAGCATCT ACTGAGCCACATGATGCCCCAATTTTGCCTCCGTCCGACCCTCCTACCTT AGGGAGAGCGCCGCTTCTACCTGGGAGCGGTTGTCGACGACCTCTTCCTC TCCACCCCGGAGTTCGAGTACGACGGAGGTATGAACGAGGCCGCCGTCGC CCAGCGGTGCACGGGCCAAGACCTGAGCAACCTGCTCGGCGTGCAGCAGT CACTCAACACCCAGTACCCGGGGTCGGAAATCATCACCGAGTTCGCCTTC AACGGCGGCGGGATTGCGGAGCATGTGCGTTTGATACGTAGGGTGCAGAC GTCGTTGGTTTTCTTGCGTGATTTGCTTGACGCTTCTTTTGAAAAGATGT GTGCAATTGCAACGAGGCGCATGGCGACTGGTGTGAAAAGGAACACCGGG GTGTTTCGTGGCCGTTTTCGCTGGCCAAGAAATACGTGCTTGAGTGAAAT GAACACTTGGCTCCTTGGATACCTGTGTGGTCTTGGTGGGTACTTAGCAG CCCATCTAGCGTTGGACATCTGTGTGGCCTTGCGATAGACTCATGCGATA TTTTCAGGGTGAGTGCTTACCAACTCATCTTATGTGTCCTTGGCATTCTG ATACCACGTATAGGTTTCGCAATCCGTGGAAGGCATCACGTACGTCCCCA ACTACGAGGAGACCATGGTGACCCTCAAGGGCACTAAGTGGTTCGAAGAT GGTGAGTTGGTTGCCTTGTAGGGTGGCTACTGAATCTCTCTCTTACCTCC TCGGAATCCTACACAAGCACACATTCCGTGTTGAAACCTACAGAAAATTT GAGTGAAAGGACGTGTTCTCTAACCCATCCCAAGTAGAATATCGCCGCCG CTATGTATCGCCGCCGCTGCGTGTACAGTGACGAAAGCTGAGAGAAACGA TTCTTTCGAACCAAGGACAGCCATTTCTGGACAAAGCATTCCCGTTGCTT GAGCTAATGCACCGCTGGCCGGTCGATGTCAAGGCCCGGTTCACGCATGT TTCAAGCGCGTGACTTGCGTACTTGCCTAGTTCACACGTGCTCTAGGTAA CATTTGCGATCAAGTTGACAGGCTGTCTCGTCTCTTCCACGCTCGCCTGA ATCACCGACATAACATGAATGAAAATATATCGATTTGGCAGGCTCCTAAA CGTATCGATGGCACATGGACACATCGTTTTATGAATGAAATGTGATCGCC AATAATATGTACTCCATCGACGTACACCGGTGTAATCTTCACGGCGAATG CATCCCCCCCCCCCCATCGACCCACCTCCTTCCGGTGGTTTCAGGTCAGA TCAACGTGCACGACACAAACTGGCTCGTCACCAACGTGCCTCTCATGCAG CAAGACATGGCCGACGGCACCTGGGAGGCCAACGACGACCTTCTCGTCGA GGTGATCAGCCACCTCGACACGCCTTCCACGTTCTACCACGGCCACCACA CCCTCATCCACCTGTCCCGCGACCAGCTGCGCGATACGGACTGCTTCACC GAGGACACCGGTGAGAGTCGTACGCTACGAGATTCACAATCCCGGAAAAC GAGCGTTCATCGACGCATCGCGCGGCTCTGGTTGACACGAACGGGTAGAG TCGCCGGTTTCGTATCTACCGCTCGTTGGGGAGCGATCGGGTGTTTTGGC AGAATGACCACTCCTTCAATTTGTACCTTCGGTAACGTTGAGAACGCTGT CATGACCGGCATGTGGGAGAGCGTGAAAGCAATACAACAACGAGTCCCGT CTTCCTCCCCCCTATTTTCACATTCATCAGGTAATGTGCAGATCGCTCTC ATGACCGGCATGTGGGACAGCGACAACTACAACTGGCGCTCAATGGTATC GCCCGGCATCACGGGTCTCTTCAACGAGAACTGCCTCGACTCGGCGGCGC AGAACCTCATGGTGTGCTACCCTGGCGACAACACCTTCGACGGAACCGTG TCCGGTGCCGCGATCCTGGTCAACGAAGACAACCAGTTCCACTCGATCTA CACCACGACTTCCAACAACGGTGAGGGAGGGTAACGTGTACCTCACAGGC CCTTAATACATACACTTTTGCTTGTCGTTGTAGAAACGACCCATTTCCTC GTATCACGTCTCGCCAACATGTGTGTTAGCTTTCGGGGTGCTTTCATCTT TTTTGTGGCGGACATGCCGTGAATGCTGTACTAGCGCACATGCAGTCTGC ACCCCCGTCGCTAGCGGGTTTTCCATTGCAGGCAGTGCCATTGTATGCGT AGGGTCGCCCCAAGACGGGCACTCGTTGGACAGTGACTTTCCATACCCTG AGCAACCGTTATTCCCGTCGTCGAGTTAAGCTGGTCCGGGCCGCGCGTGT CCGGTGCGGACTTTTGCTACGCGGGTCCAATTGACGTTTTTTTGTCGAGG CAGTTGTTGGTTGTCCCAGCGCCGAGGGGGACGGCCGCTAGTTATCGTCT CAATCACACCGTGTACATACACCACGGCGGTTATTGGTCGAGAGACCTCG GGTGCGGGACAACAAGGTAATCGACCCACCGGTCTACATCAGACAGATAT GTCGCGTCTTGCAGGTGACGGCGCCCAGAAGTGGGGCCGCTTTTTCACCC TCTCGGACCTCTCTCCGGTCACCCCCTTCCCTCGCGGACTAGTCGGTGTG GTTCTTGCGATACTTGGACTCACAGCCTGCTTCTCTGCACCAATGCCGCT TGCGTTTTCTTCCAAACGATGTTTTAAAATGCAGGCTACGATGGGGCCCA GATCGTGCCCAGATTCGCGACCTTCGTGTACTTCAACTGCGTCAGCGGCT CCGTAAGTGACTCAGTGATGTACAGACTCATGCAGCATCCCTCGCCTTGC TTCATGTGGTAAACATATTGTTGTTCTTGTGTGTTTTTTGTTGCACTTGC ACAGCTTATCCAAAATTTCGCGACCTTGCGAATGATCGTTGAGTCTCGGC CTAGATCCCGTTTCAACCCCGCTCTCTCTTGCCTCGTCTCGTAGTGTGTA CAACCGTCGAGTGAAAATACGTGTCTTTCGACCGCCTTTGGCTTGGGTGC TTTTCCGTTTCTGGTTGGTATTCCGTCGCCATTCTGAAGAGCGTCGGCCC GGACACACGTACAATGTTTGCTTTGGCGACTCTAATTCCGTTCGGGAATG GATAACACGAGGACGTGGTTGGTTGTCTTGTGTTTTGTCTTCTCGTCTCT TCGTCTAAGTAGCAATTGCCATGCTGTGCGATGATCGCTCACCCTGTCTT CATTTTTGTCCACCTGTTTCGTTTCCTTTCCGGACGCTTTTTTTCAGTGC CTCGTGAACGAGAACGAGTACATCAGGCGCTTCGTATGCGAGTGTACCCC GCTCGACCCAAGCATCGCCGATTACGTAAGTTTTCTCGAAACTGCCGGAC GGCAGTGTCTGTAGGAGCACGTGGTCGGTGGGGTCGGTACACAACAACGA AGGCAGTAGCGGGAGGAAACGAAGCTTCTTCGATGCTATCTTACGCAACT GCTGTCACCACTTGCGTCTCGCGGTACGAATCCCAGGCAGTCATTGTTGG AACTACGCATACAGGTGCTTGCGATCTTCACGTCCCTCGCTGACTTGACT TGCTCTCCCCTCCACCCCCTCCCATTCCCAATGCTAAAGACTTGCACGAG CACCGCGGACGAATGCGTCGGCACCGACGGCGCCACCGATATCCAGTCCT TGGGTTCCATCGAGGCGGTCTTCCACACCGAGGCCTCAACCACCACACGC TACATGCTGACTGGTCGCAGGTCGGTTGTGGTCTCGTTGTGTTCGTTTCT ATGTTTTCGTTGTCGATTCCCTCTTTAGTGTGTTCTTTCGCACTGTTGGT ACTGATACGTTTATATTTTTAAATATACGTGCTTGGGTTGTCCGTGTCGT AGAGCACGCTAAAACAGTTGTGGTGGAGCTACTGTAAAGGGGCGTGCATT TCGTCAAGTTACTTTAGGCGCGGTATTGTCTTATCTGATGTTTTCACCTG GTGAGTACCTGTCCGCCGTTTCTCGGCGTGTTTTCCTGTCAGATGCACTG ACCGCAGTCCCGGGCGATACTTGAGACGTGGATTCTTCCGCCTTGAAGCC TGCGTCGTGTTGATTGGATGCTTCTGTACTCCCATCGTAACTGATCGAAC CCCGGCCCCGCATGTCGAACGAACGTCTCCACGTCGACCCTCCTGTCGCA CCTGGATCGCAAAAGAGACAAGTACATGTTCCACCAAGCCAACATTATAC CAGCAGGGGACGTCGGCGACGGAAGCCAGTCCCTGCTGGAGTACTGGTAC GAGCGCGTCTTGGAGGTGTTTTCCAGCTACATTACCTTCCCGGTTAAGGT GAGCCATGCCTCGCTGTATTGAAACCAGAGACGGCCATATCTAACGCCAC GTGATGATGATAGATGAGGTCACAAATTTTGTCCAAGGGTTCACGCCTCA CCCTTGCCCTGTGTCTCCCCAATTACCCCGAACAGAGCATCAAGTTCGAC GACCTGTGCACCGAGTTCACGCTCCACGAGGCCCTGGACGACTCGAGCCC GTACGTCACCATGGCCCTCGACGAAACTGGGGCTGTTACCGGCTTGTCCT ACGTCTCGGGCAGCGGGGCCGGCCTCGTGCCACTTACCGTCCCGACCGCT TCGGCCGCCTCGGTGGGTTCCGAGGCTCGCTACAATGATCTGAAAACGGA CTTGCGGTTTGTGCATGCGGCTTGTTGACCCAGCGGTGCAGCTGCCCGCT GACGAGAAAATGCCCACAAGAATATACCTTGCATCAAATTGGAAGTATTG CACAAGCCATACAGCTTACATCACACCAGATCATGGCGCAATCGAAGAGT CCATGAAATATCCTGCTCAAAATGGGCATTTCGTAGGAGAGCGCCGGGAA GAAGACACCGTAGGTAACCTCTTTCAACTCTCTGGGCATTCGCCCGGCAA ATCACGCACCGTGGTGTCATCGCACTTCGAAGCCGTTTCTCACTTCCCGG AACCTCACCTCGTAGTAACCTACCTGTAACATTCACGGCATCTTGCTTCT TATGCTTCTAACTCATTTTGAATGATCGGACCGGAACAGATCCCCACGAC TGGCCTCTCCATCCAAGACACGGAGACTTACGGCACCGACACCACCTACT ATCTCAAGGACGACGACGCCTCCACTGTCCCCAGGGTGGGCAGCAAGCCT GATGCCAGGTGAGATTAGTACTGACGGCCGCAATACGCACGATAAGGGTG GGGAATACCGCAAGCTCCCCCCGAATTTGGGCAGTAGATGTTCGTCCTGG CGGCATTCTGTATGGAAGTTGTATCCGTGAAATCGTTGTCGTCTGTGGTT CGGTGACAAGAGTTGCTTCTTGTGACCAGGATGGCGTCGTTGAGAAAGAC TGCGTGATGTCGGTTCCACGGCCGAAAGAAGGAAGAGAGACGAGAACATG TGTGCAATGTGCGTTGTTTGGCGAAAAAAAACGGTCTTGAGCGTGTGTGG GATCGACGGTGACATGCACGAGCTGAATGCAAGCATAGCGGACATGATGC AAGGCTTCGTCGAAAGGGAAACTTTCAAAGGCAAGAGAGGGTTCACAGAA AAAATTGCCGAGCCAACAGCCATACGGGGTTGCTCACCGACAACCTATCA TCGAGCTTCACCAAAAAAATCGCTGTTAGATTGCACCGATCCAATCCTCC GACCCCGATGCTTGTTGTCCAACTCTGCCTCTACTATGAGACTGCGGTAT TTATTTCCCTGCTGTCCTCTTCAGATAACAAAATACGTCAGGCAGTAAAT GACAGATCACGCCAGCTGCCCCGACGACTCGGGTACCTGACTGACATGAG TTGATTCCTCATGGCGTTCTCGGCACCTACGACATTCTCCGTTACCGACG CACGCCTCCTCCTGATTGTTGGGACCTCCTCAGCCCTACCTCTCCACCTC TCAAAATCTCCTGCTTCGTTCTTCCTCCACGTTTCTTTACAGCGAGCTCG CCGAAGTCCCTCTGCCTGTGCTCGAGAGCGTCGAAGGCGACGCCAGCGCT ACCGAGACCCCCGCGGAGATCGTGGAGAACGCCGAGGAGTTGGCGGAGAA CCAGGAGGCGAATGCCCTCGTGCCGGCAGAGAACGGCGGTCTCTTGGCTG ACGAGGGCCTGGTCGACGCGGACGTTGCCGCAGACGTGGCGATCGACGAA GCGGAGGAAGATGGCCTCCTCTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6700:1132..7955-

>mRNA_Ecto-sp13_S_contig6700.17593.1 ID=mRNA_Ecto-sp13_S_contig6700.17593.1|Name=mRNA_Ecto-sp13_S_contig6700.17593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1908bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6700:1132..7955- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGCAGGTATGTCGACAGTGCCGGCGAGCCCTACCTCTCCGGGGTCGC
GGGTGACCAGGAAAACGCTGCGGTGCTCAGCTACACCGGTGCCGACGGCC
ACGAGGAGTTGCACGTCTTCAACACCATCGGCTGGTTTGACACCGGCGCG
TGGCCGTGGGCGCATTTCTACAACGAGTGGGCCACCAAGGGCATCTTCAT
GGGAGAGCGCCGCTTCTACCTGGGAGCGGTTGTCGACGACCTCTTCCTCT
CCACCCCGGAGTTCGAGTACGACGGAGGTATGAACGAGGCCGCCGTCGCC
CAGCGGTGCACGGGCCAAGACCTGAGCAACCTGCTCGGCGTGCAGCAGTC
ACTCAACACCCAGTACCCGGGGTCGGAAATCATCACCGAGTTCGCCTTCA
ACGGCGGCGGGATTGCGGAGCATGTTTCGCAATCCGTGGAAGGCATCACG
TACGTCCCCAACTACGAGGAGACCATGGTGACCCTCAAGGGCACTAAGTG
GTTCGAAGATGGTGAGTTGATCAACGTGCACGACACAAACTGGCTCGTCA
CCAACGTGCCTCTCATGCAGCAAGACATGGCCGACGGCACCTGGGAGGCC
AACGACGACCTTCTCGTCGAGGTGATCAGCCACCTCGACACGCCTTCCAC
GTTCTACCACGGCCACCACACCCTCATCCACCTGTCCCGCGACCAGCTGC
GCGATACGGACTGCTTCACCGAGGACACCGGTAATGTGCAGATCGCTCTC
ATGACCGGCATGTGGGACAGCGACAACTACAACTGGCGCTCAATGGTATC
GCCCGGCATCACGGGTCTCTTCAACGAGAACTGCCTCGACTCGGCGGCGC
AGAACCTCATGGTGTGCTACCCTGGCGACAACACCTTCGACGGAACCGTG
TCCGGTGCCGCGATCCTGGTCAACGAAGACAACCAGTTCCACTCGATCTA
CACCACGACTTCCAACAACGGCTACGATGGGGCCCAGATCGTGCCCAGAT
TCGCGACCTTCGTGTACTTCAACTGCGTCAGCGGCTCCTGCCTCGTGAAC
GAGAACGAGTACATCAGGCGCTTCGTATGCGAGTGTACCCCGCTCGACCC
AAGCATCGCCGATTACACTTGCACGAGCACCGCGGACGAATGCGTCGGCA
CCGACGGCGCCACCGATATCCAGTCCTTGGGTTCCATCGAGGCGGTCTTC
CACACCGAGGCCTCAACCACCACACGCTACATGCTGACTGGTCGCAGAGA
CAAGTACATGTTCCACCAAGCCAACATTATACCAGCAGGGGACGTCGGCG
ACGGAAGCCAGTCCCTGCTGGAGTACTGGTACGAGCGCGTCTTGGAGGTG
TTTTCCAGCTACATTACCTTCCCGGTTAAGAGCATCAAGTTCGACGACCT
GTGCACCGAGTTCACGCTCCACGAGGCCCTGGACGACTCGAGCCCGTACG
TCACCATGGCCCTCGACGAAACTGGGGCTGTTACCGGCTTGTCCTACGTC
TCGGGCAGCGGGGCCGGCCTCGTGCCACTTACCGTCCCGACCGCTTCGGC
CGCCTCGATCCCCACGACTGGCCTCTCCATCCAAGACACGGAGACTTACG
GCACCGACACCACCTACTATCTCAAGGACGACGACGCCTCCACTGTCCCC
AGGGTGGGCAGCAAGCCTGATGCCAGCGAGCTCGCCGAAGTCCCTCTGCC
TGTGCTCGAGAGCGTCGAAGGCGACGCCAGCGCTACCGAGACCCCCGCGG
AGATCGTGGAGAACGCCGAGGAGTTGGCGGAGAACCAGGAGGCGAATGCC
CTCGTGCCGGCAGAGAACGGCGGTCTCTTGGCTGACGAGGGCCTGGTCGA
CGCGGACGTTGCCGCAGACGTGGCGATCGACGAAGCGGAGGAAGATGGCC
TCCTCTAA
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