mRNA_Ecto-sp13_S_contig67.17588.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig67.17588.1
Unique NamemRNA_Ecto-sp13_S_contig67.17588.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: D8LCC9_ECTSI (DUF547 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC9_ECTSI)

HSP 1 Score: 575 bits (1482), Expect = 7.950e-207
Identity = 287/302 (95.03%), Postives = 288/302 (95.36%), Query Frame = 2 
Query:    2 MIALITRAHFVGRVAVLAATGALS--STSSPKHPCAEMAGSSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRINGPSPGAPGKDGKC 901
            MIALITRAHFVGRVA LAA GALS  STSSPKHPCAEMAGSSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKK L RTK ITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFL NPKKGLSLDKAKGVIKLSKIFQWFE DFTTKIGKDSVLDALLPYMPEDVRTYVSENK  LKVDHFEYDW +NG SPGAPGK GKC
Sbjct:    1 MIALITRAHFVGRVAALAAAGALSVTSTSSPKHPCAEMAGSSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKKRLFRTKRITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLTNPKKGLSLDKAKGVIKLSKIFQWFEGDFTTKIGKDSVLDALLPYMPEDVRTYVSENKGSLKVDHFEYDWGVNGSSPGAPGKGGKC 302
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A7T0G4N3_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0G4N3_9BACT)

HSP 1 Score: 196 bits (499), Expect = 3.220e-58
Identity = 106/256 (41.41%), Postives = 152/256 (59.38%), Query Frame = 2 
Query:   98 CAEMAGSSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGK-DAEYALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRIN 862
            C  ++ S A D++ WD ++K  VK   IRGI L  VDY G++ D  FE  +  LK A  S + + D   A WIN YN LA+KM+ D+           + SI+DIGS+   VW +PAG+VGG+   L+DVE+  LR       +P +H  IVCASVSCPD+A+ AY  E+L   +E    LFL N KKGL +D+ +  I +S IF+WFE DF  K G  + + A   Y+P   R+++++ KD+  +D+ +YDW +N
Sbjct:   19 CVLVSTSWAFDFSDWDQILKQRVKPGSIRGISLYTVDYGGLKGDEKFEQLLSRLKTANLSSIKQGDPALAFWINVYNILAVKMIVDH---------HPLDSIRDIGSIFKSVWNRPAGIVGGKEYTLNDVEHEILRKM----GEPRIHVAIVCASVSCPDLAMEAYTAESLNQQLERQTALFLGNEKKGLKIDRKQRKIYVSSIFKWFEEDFDAKGGVRAFIGA---YLPPKERSFINQ-KDV-SIDYLDYDWGVN 256
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A7S1CNX3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNX3_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.150e-58
Identity = 100/250 (40.00%), Postives = 147/250 (58.80%), Query Frame = 2 
Query:  128 DYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKKSLLR-TKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRINGPSP 874
            DYA W ++   ++   E+  I  +VVDY+G+  D  F+  V SL  A T    K+  YAL++N YN LA+  +  N C + +      I+SI+DIG+    VW +PAGVV G   +L  +E+  LRDPK Y  D  LHACIVCAS+SCPDV + A+ P  + A M+A +  F+AN  KG +LD+  G I+LS IF W+ +DF   + +D VL  +  ++P     ++  +   + V +F+YDW +NGP P
Sbjct:   28 DYAGWTALTTEYIHEGELANITEHVVDYKGLAADARFDAVVASLATAATPTT-KNETYALFMNAYNVLAVNTIIKNACVRPVGGGCHPISSIRDIGNASVSVWNRPAGVVAGRQFSLQQIEDF-LRDPKPYGEDARLHACIVCASISCPDVRIGAFTPADVDAQMDAAVAAFVANTGKGAALDEGAGAIQLSPIFLWYALDFI--VHEDGVLPFVAAHLPAAQGAWLRAHASAVSVSYFDYDWDVNGPVP 273
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A2H0MVD3_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_45_15 TaxID=1974048 RepID=A0A2H0MVD3_9BACT)

HSP 1 Score: 188 bits (478), Expect = 6.150e-55
Identity = 105/247 (42.51%), Postives = 150/247 (60.73%), Query Frame = 2 
Query:  128 DYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEY-ALWINTYNALAIKMVTDN-PCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRIN 862
            D++ WDS++K +V T  IR IPLNV+DY+ ++ +   +  ++ L+N   S L K  E  A WIN YN LA+KMV D+ P K          SIKDIGS+   VWK+PAG V GE   L+D+E+  LR       +P +HA IVCASVSCPD++ T + PETL A ++  M++F+ N  KGL +D+    ++LS IF+WF  DF +K G  S + A L   PED +     N+   ++ +F+YDW +N
Sbjct:   39 DFSEWDSILKENVSTKIIREIPLNVLDYKKLKYNSQLKNLLQRLENTDISNLKKREEVLAFWINVYNILAVKMVLDHYPVK----------SIKDIGSIFRSVWKRPAGKVAGEERTLNDIEHEILRKM----GEPRIHAAIVCASVSCPDLSKTVFVPETLDAQLDWQMKVFVHNSAKGLVIDREGKRVQLSAIFKWFAEDFKSKGGVLSFVGAYLS--PEDNKFI---NRPDTEISYFDYDWGLN 266
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A523N030_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A523N030_9BACT)

HSP 1 Score: 185 bits (470), Expect = 1.160e-53
Identity = 105/246 (42.68%), Postives = 143/246 (58.13%), Query Frame = 2 
Query:  128 DYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAE-YALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRIN 862
            D++ WD ++K HV  + I G+ L  VDY GV+ DP +   +  LK    + L    E  A WIN YN +A+KMV D+           + SIKD G++   VWKK AGVVGG+ + L ++E+  LR       DP +H  IVCASVSCPD+   AY  E L   ++  ++ FLANP KGL +D+A+G+I LSKIF WFE DF TK G   VL  L  Y PE  R+ + +N D   V + +Y+W +N
Sbjct:   45 DFSGWDGLLKRHVGPATIAGVRLAGVDYPGVKKDPAYSKLIGELKTFSPATLNTLKEKLAFWINVYNIMAVKMVADH---------YPVDSIKDAGNLFGSVWKKTAGVVGGKEVTLHEIEHEILRKM----GDPRIHIAIVCASVSCPDLRKEAYTKERLDQQLDDQLQRFLANPGKGLKVDRARGLITLSKIFDWFEDDFETKGG---VLPFLARYAPEPDRSLL-KNGDA-DVSYLDYNWDLN 272
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A6N9IWQ1_9BACT (DUF547 domain-containing protein n=2 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A6N9IWQ1_9BACT)

HSP 1 Score: 184 bits (467), Expect = 2.500e-53
Identity = 100/249 (40.16%), Postives = 146/249 (58.63%), Query Frame = 2 
Query:  122 APDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKD-AEYALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRING 865
            A D++ W+ +VK +V    + GI +N VDY  +++DP F + V  LK+ P   L  D +  A WIN YN LA+KM+TD+           + SIKDIGS  +PVWK+ AGVVGG+   L D+E+  LR   +    P +H  IVCASVSCPD+ + AY  E L   ++  MR FL + +KG+ LD+    + LS IF+WFE DF +  G   VL  +  Y+  + R  ++  K  +KV + +Y+W++NG
Sbjct:   34 ADDFSDWNVLVKKYVSPKAVDGISINAVDYVSLKNDPAFSSLVSRLKSYPMGRLESDKSRLAFWINVYNILAVKMITDH---------YPVESIKDIGSFFSPVWKRKAGVVGGKERTLHDIEHEILRKMNE----PRIHVAIVCASVSCPDLRMEAYTAEKLSDQLDDQMRKFLLSREKGMKLDEKGKKVYLSSIFKWFEDDFESHGG---VLKFISKYILGEERKLLASRK--IKVSYLDYNWKVNG 264
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BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A0J6YZB7_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitromaritima sp. SCGC AAA799-A02 TaxID=1628278 RepID=A0A0J6YZB7_9BACT)

HSP 1 Score: 180 bits (457), Expect = 4.640e-52
Identity = 96/251 (38.25%), Postives = 142/251 (56.57%), Query Frame = 2 
Query:  128 DYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGL-GKDAEYALWINTYNALAIKMVTDN-PCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRINGPSP 874
            D+  WD ++K +V    I GI LN VDY  ++ DP F   V  LK    +GL  ++ + A WIN YN  A+KMV D+ P K          SI+D+GS+   VWK+PAG++GG    L ++E+  LR       +P +HA IVCASVSCPD+ L ++    L+  ++  M+ FL NP KG+ +D  +G + LS IF WFE DF  + G   VL  + PY+    R  +   K  ++V + +Y+W++N  +P
Sbjct:   16 DFTEWDILLKKYVSPRTIDGIRLNAVDYGKLKTDPGFSRLVGGLKKFSPAGLKSREEKLAFWINIYNVFAVKMVVDHYPLK----------SIRDVGSLFRSVWKRPAGIIGGREYTLHEIEHGILRKM----GEPRIHAAIVCASVSCPDLLLESFSAGKLEEQLDNQMKTFLGNPGKGMQVDAGRGRVTLSSIFDWFEGDFEPRGG---VLAFIKPYVSATARKVLG--KPGVRVSYMDYNWKVNESAP 247
[Close]
BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A2H0MJZ5_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8 TaxID=1974049 RepID=A0A2H0MJZ5_9BACT)

HSP 1 Score: 181 bits (458), Expect = 7.430e-52
Identity = 101/246 (41.06%), Postives = 142/246 (57.72%), Query Frame = 2 
Query:  128 DYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGL-GKDAEYALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRIN 862
            D+  WD ++K +V    + G+ L+ VDY+ V+ DP F   VE LK+A  + L  ++ + A WIN YN LA+KM+ DN           + SIKD GS+ +PVW KPAG V G    L +VE+  LR       +P +H  IVCASVSCPD+A  AY PE L   ++  MR FL  P KG+ LD A   + LS IF+WFE DF  K G   VL  L PY+  + R  +++ +  ++V + +Y+W +N
Sbjct:   46 DFTDWDGMLKRYVSERTLDGVRLSAVDYRKVKADPAFSHLVERLKSADVAQLKSREDKLAFWINVYNILAVKMILDN---------YPLQSIKDAGSLFSPVWDKPAGEVAGVGRTLAEVEHGILRKM----GEPRIHVAIVCASVSCPDLAREAYLPEKLGDQLDRQMRAFLREPGKGMRLDAAGRRVFLSSIFKWFEDDFEAKGG---VLPFLRPYVSPEERKLLNDPE--IRVSYLDYNWNVN 273
[Close]
BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A350UX17_9BACT (DUF547 domain-containing protein n=2 Tax=Nitrospinae TaxID=1293497 RepID=A0A350UX17_9BACT)

HSP 1 Score: 177 bits (450), Expect = 3.860e-51
Identity = 100/250 (40.00%), Postives = 140/250 (56.00%), Query Frame = 2 
Query:  125 PDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAE-YALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRINGPS 871
            PD+A WD+++K +V    I G+ LN V+Y  ++ DP F   V  LK+   + L K  E  A WIN YN  A+KMVTDN           + SIKD+GS+   VWK+ AG+VGG+   L+ +E+  LR   +    P +H  IVCASVSCPD+A   YK + L   ++  MR FLANP KG+ +      + LSKIF WFE DF  + G   VL  +  Y+    R  +  +   L+V + +Y+W +NG S
Sbjct:    5 PDFADWDALLKKYVAPETIDGVRLNAVNYGKLKTDPAFSRLVNGLKSFSPAQLKKHEEKLAFWINVYNVFAVKMVTDN---------YPLESIKDVGSLFKSVWKRNAGIVGGKDYTLNAIEHKILRKMNE----PRIHVAIVCASVSCPDLATDVYKADRLSEQLDVQMRKFLANPGKGMRVGTEGKKVFLSKIFDWFEDDFEPRGG---VLKFIRLYVSPKDRQALDNSS--LRVSYMDYNWGVNGSS 236
[Close]
BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Match: A0A3C0S8E0_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A3C0S8E0_9BACT)

HSP 1 Score: 179 bits (453), Expect = 5.820e-51
Identity = 98/249 (39.36%), Postives = 142/249 (57.03%), Query Frame = 2 
Query:  128 DYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAE-YALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKDSVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRINGPS 871
            D++ WD ++K +V    I G+ LN V+Y+ ++ DP F   +E LK+   + L    +  A WIN YN  A+KMVTDN           + SIKD+GS+   VWK+ AG+VGG+   L ++E+  LR       +P +H  IVCASVSCPD+A   YK E L   ++A M+ FLANP KG+ +D     + LSKIF WFE DF ++ G   VL  + PY+    +   +     L + + +Y+WR+NG S
Sbjct:   56 DFSDWDVLLKKYVAPGTIDGVRLNTVNYEKLKTDPAFSRLIEGLKSFSLARLKTHEDRLAFWINVYNVFAVKMVTDN---------YPLESIKDVGSLFKSVWKRNAGMVGGKEYTLYEIEHEILRKM----GEPRIHVAIVCASVSCPDLATDVYKAERLSEQLDAQMKGFLANPGKGMRVDTGGKKVFLSKIFDWFENDFESRGG---VLKFIRPYVS--AKDGQAVGNPGLHISYMDYNWRVNGSS 286
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67.17588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCC9_ECTSI7.950e-20795.03DUF547 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7T0G4N3_9BACT3.220e-5841.41DUF547 domain-containing protein n=1 Tax=Candidatu... [more]
A0A7S1CNX3_9STRA4.150e-5840.00Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2H0MVD3_9BACT6.150e-5542.51DUF547 domain-containing protein n=1 Tax=Nitrospin... [more]
A0A523N030_9BACT1.160e-5342.68DUF547 domain-containing protein n=1 Tax=Nitrospin... [more]
A0A6N9IWQ1_9BACT2.500e-5340.16DUF547 domain-containing protein n=2 Tax=Nitrospin... [more]
A0A0J6YZB7_9BACT4.640e-5238.25DUF547 domain-containing protein n=1 Tax=Candidatu... [more]
A0A2H0MJZ5_9BACT7.430e-5241.06DUF547 domain-containing protein n=1 Tax=Nitrospin... [more]
A0A350UX17_9BACT3.860e-5140.00DUF547 domain-containing protein n=2 Tax=Nitrospin... [more]
A0A3C0S8E0_9BACT5.820e-5139.36DUF547 domain-containing protein n=1 Tax=Nitrospin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67contigEcto-sp13_S_contig67:22467..28793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score574.7
Seed ortholog evalue2.5e-161
Seed eggNOG ortholog2880.D8LCC9
Preferred nameZRT3
Model size919
KEGG koko:K07238
KEGG TC2.A.5.5
Hectar predicted targeting categorymitochondrion
GOsGO:0000041,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0006873,GO:0006875,GO:0006882,GO:0007034,GO:0008150,GO:0008324,GO:0009987,GO:0012505,GO:0015075,GO:0015318,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0031090,GO:0031224,GO:0031984,GO:0034220,GO:0034486,GO:0042175,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055069,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070838,GO:0070839,GO:0071577,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0098827,GO:0098852,GO:0140147
Exons5
EggNOG free text desc.zinc ion transmembrane transporter activity
EggNOG OGsCOG0428@1,KOG2474@2759
Ec32 ortholog descriptionDomain of unknown function DUF547
Ec32 orthologEc-14_005220.1
Cds size903
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67.17588.1prot_Ecto-sp13_S_contig67.17588.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig67 22482..28792 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463921.17172-UTR-Ecto-sp13_S_contig67:22466..224811681463921.17172-UTR-Ecto-sp13_S_contig67:22466..22481Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig67 22467..22481 -
1681463921.2511568-UTR-Ecto-sp13_S_contig67:28792..287931681463921.2511568-UTR-Ecto-sp13_S_contig67:28792..28793Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig67 28793..28793 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463921.1888235-CDS-Ecto-sp13_S_contig67:22481..226821681463921.1888235-CDS-Ecto-sp13_S_contig67:22481..22682Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig67 22482..22682 -
1681463921.2011175-CDS-Ecto-sp13_S_contig67:25069..252611681463921.2011175-CDS-Ecto-sp13_S_contig67:25069..25261Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig67 25070..25261 -
1681463921.2156146-CDS-Ecto-sp13_S_contig67:26841..269481681463921.2156146-CDS-Ecto-sp13_S_contig67:26841..26948Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig67 26842..26948 -
1681463921.228437-CDS-Ecto-sp13_S_contig67:27275..274641681463921.228437-CDS-Ecto-sp13_S_contig67:27275..27464Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig67 27276..27464 -
1681463921.2396853-CDS-Ecto-sp13_S_contig67:28578..287921681463921.2396853-CDS-Ecto-sp13_S_contig67:28578..28792Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig67 28579..28792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig67.17588.1

>prot_Ecto-sp13_S_contig67.17588.1 ID=prot_Ecto-sp13_S_contig67.17588.1|Name=mRNA_Ecto-sp13_S_contig67.17588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp
MIALITRAHFVGRVAVLAATGALSSTSSPKHPCAEMAGSSAPDYAAWDSV
VKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEY
ALWINTYNALAIKMVTDNPCKKSLLRTKMITSIKDIGSVVAPVWKKPAGV
VGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPE
TLQADMEANMRLFLANPKKGLSLDKAKGVIKLSKIFQWFEVDFTTKIGKD
SVLDALLPYMPEDVRTYVSENKDILKVDHFEYDWRINGPSPGAPGKDGKC
*
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mRNA from alignment at Ecto-sp13_S_contig67:22467..28793-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig67.17588.1 ID=mRNA_Ecto-sp13_S_contig67.17588.1|Name=mRNA_Ecto-sp13_S_contig67.17588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67:22467..28793- (Ectocarpus species13 EcNAP12_S_4_19m)
GATGATAGCACTCATCACACGAGCCCATTTCGTTGGGCGTGTTGCTGTCC
TTGCCGCTACGGGAGCACTGTCCAGCACCTCATCCCCCAAACACCCCTGC
GCCGAAATGGCGGGTTCCTCTGCCCCCGACTACGCCGCGTGGGACTCGGT
TGTCAAAGCGCACGTCAAGACCTCAGAGATACGGGGGATACCGCTGAACG
TGGTTGATTATCAAGGTGTGCGCTGCTGCTGCTGTGTGGAGAGGTAGACG
TATATCCCTTCCGTGATGGGCACCGAAACAGCGGTCTCAATTATCACTCT
CGGCCTTTTCGACCACTGCGGGTGCTGCTGCTGCTGCTGCTACTGCCGCC
ACCCGCAGCAGACGCGGCTCAGCAGCCGCTGTTGTGTGCAACCGCCGGTC
ACTGCTGTACAAACACACATCGAGAAGCAGCTTTGACCTCCGTCAACACC
TTTGGCGTGCCCGCGATTCCGGGCCCGTCCTACCCCCCGCCCTGCTGACT
ACTTATTTGTCTACACTGCAGGAGCGGCAGCAGTCGCCGCCATTCGGTCG
GTTTTGGTACATCAAACTTCAAACTTCCATCTCAGATCTTGGCGCAGTCA
CACAAGCTGGACGTTTCGCTCACAGTATGGCTAACTTGATTCGAATTCAT
GCCTGACTTGACTCGAAGCGAATTCGATTTCAACGTAGACGAGGAAAACG
GACGGCACAACGCCATGAAAATGAAGGAAAGCACGGCAGGTGTGGAGGCA
ACAGAAGTACCTGACAGACTCCGGTGGATGCCTCCAGAGAACGTAAGTTT
TTTGTTGGGGCACATGGAACACGGAACTGATCTTCGGGTCTGACCCCAAC
TGACGTGCGGGTTAACCACGCGGGTCGGACCCGTTGGGCCGGAGGAAGTC
AGTTGGCGGGTCAGTAAAAGATAACCCGTGAATGACAGGTCATGACCCGA
TCTGTGATTTTTTTCAATGGTCGTTACGCTTTTCACCTGACCCGCTCGCT
GACATCGACATGCGTTTGTATTGACATTCCGTGATCTATCGGTGACGATT
ATTTTTAAACGAAACCCAACCGGCCCGGATCGGCAAACGGGGCGGGGACC
GGAGGTACCGCCTGAGGCAAACTACAGCAGTAAACGAATGTTGCACAATA
GCTTGATTTCTCCTGGAGACTCGCCCAAAACTTCACCTCTGGAACCTCAT
GGGTGAGAAGGGGTTGAACCTACTCTTTGAAGTAGTCGCTGGTTCGATGT
AATATGCAAGTCTTGTTTACATCCGCTCGTTCGTGCGCTTTTAACCAACC
GTTGATGCCTCGCCAACTCAAACGACCAGGGGTTCGAGATGATCCGAACT
TCGAGACCTTCGTCGAGTCGCTCAAGAACGCGCCAACATCCGGGCTTGGC
AAGGACGCTGAATACGCCTTGTGGATAAACACCTACAACGCCCTGGCTAT
AAAGATGGTGACGGACAACCCATGCAAGAAGAGCTTGCTTCGTACCAAGA
TGATAACCAGCATCAAAGGTATGAAAAACAATCCGCCAGGAGTGGGGCTG
CAGGGAAAATAAACAGCCACGAGTTTTGTTCGGCGTGTGCCGCTTGTTTG
ACGTGCTGCTCAATCAAAATTGACAAACGTAAACCTCACACACAAAGGAC
CAGGAGGGATACAGAATATGCGGTGATACGTAGAAGTACGGTAGAGGGCG
CGTTCGAAAAGGATTTGAATGTAGCCAAAAATGTATCGCACTCTTAGACA
GGAATGATTTCGTCTCAAAAGCCTCAAGACACGAAGGTCAGCAATAGATT
ACCCTTCCTCCGCCCCTTCCGATGCCCATCCCAATCTTCTTTTAGATATC
GGGAGTGTGGTGGCGCCGGTGTGGAAAAAGCCCGCGGGGGTAGTCGGGGG
TGAAACGCTGGCTCTGGATGACGTCGAGAACGTAAAATTGCGGGACCCCA
AGGTGAGATTTGGGTCGCCCTTCGCCGGGCGGGGGGGGGGGCGTACTCTT
ATGTTTTGCATGCATTCGCGGTTAAACCATTGACCACGCGTCCTCGAGAG
GACGGAGCATTGTACCCACAGGACCGATCACCGATGGCCAATCGGTCCTT
TCGACTTTGCCAAAGGTGGCTCAAAAATATCTTCCCTAGTCTATCCTAAC
GACATCTCTTCCCGCCTTTTGAATCCACTTCCTATGCCCCAGTACAGCTA
CCGTCCTTTCCTCTCTGTTCTATGCCTCAAACATCTCCCTGTACGTCCAA
TCTATTTTTCCCAGCTCAGTCACGTACACTTCCCTCTCCTCCNNNNNNNN
CATTCGAAGCCGCAATCACATTTGAACTCGTCGTCTTCGTCGTCTACCGT
TCATGTCTTCGTCGACGTTCTCGAAGGCCTATGTCCCCGGTCCTGAATTT
GACCCTAAGCTTTGTTCCTGCATCCATTGGCCCCCATGTAGGTAACCCTC
GAACCCTATTATTTCCTTCAACATTCCGTACACTTCTAGACCCTCCTTAT
CCTTGATTTGTTTCCTTAGATTCTGTTCTCTCTCGGCACAAGCAACAGAT
ATCTTCTCCTTGAACCCCTTTAGACCATCCGTTTCCAGCGTTTTATCTTC
GTCGATGTCGAGTCCCTTCCATACGTCCTCTACAACCTTGACTAATTCCA
TGAGTTGTCTACCCCTCTTTTGTTTGCCCACTTCGCCTCCCATACAATTC
TCGGCAACCTCTCCTCTCTCATCCCGCACATGCGATACTGCCATGTCAGC
TTCCTTGCGTCTCTTCCCGACCGTAGGGATTGGATCCCCAATTGGGGGGA
GGAGTGTACTCGTAGTTGTCGTTGGGCCATTGACCTCGCATCCCTATAAA
GCCGGGACGGAGTACGCCGGGTTCTCACGGCACCAGGCTCTCACATCACC
AAACGCGAAGCACCGTGAGGTATTCGGCGAGTCGCATGAAGGGTGCGCTG
CATCCTGCAAAGGGTGTTGGGCATCTTGTGCTTTCTTCCTTGCGTGCGCA
TGACAGCTGCGAATGACAGAATCTACTCGACCAACATTGTGGATACCGCA
AAAAGAAAAGAGGCGAAAAAAAGTGGTAACCTGGTTGCCGAGCTCACGAA
GTGATCCGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCC
CGATGGCAAACACCGAGGGAGGTGCGGGAGGGACGGGGGGGAAAGACAGT
AGGTATGTATGTACCTCCGCTTTGTTTGCTAGAAGAATGGACCCCTTGCT
TCGTTTGCTGTCATGTCCCGCTTATTCGACGGCGAGCTTCGGAGCTCGCG
GCGTCTGTCACCGAGGGTAGCTGGAGCCTTTTACCGCGTCTTGCGTCGTC
GCCGTTCTTCCATCCGCTCTTTTTTTTTTTTATCGCTTCCTCACTGTCTG
TGTCTGTCTCTATCGGTCTGTATTTCTGTCTGTCTCTTTTGTCTGTTTTT
ATCTCTCTCTCTCTTCGTCTCTCTCTCCCCCCCTCCCTCTCTCTCCGTGC
AAACGCGAACGGTGTCATGCCCCCCACGACAGGACTACCCAGCGGACCCT
CTCCTGCATGCGTGCATCGTGTGCGCTTCCGTTAGCTGCCCGGACGTCGC
CCTGACCGCCTACAAGCCCGAGACCCTGCAGGCGGACATGGAGGCCAACA
TGAGACTCTTCCTGGCCAACCCGAAGAAGGGTCTATCGCTCGACAAGGCC
AAGGGTGTCATCAAACTTTCCAAGGTGAAATGCCGGTCCCGCCGTGAACA
CTGCCCACGACTACACCAAAACCTTGACTGAGAAAAGTTCCGTGCGAGTT
TCGTGCATCATACGAGAGCTTATGTATATGCGTAGCGGGGCCAACCAGAT
TTAGACTTTATTCAAATTGTCTTTTCCGTGAAATTGCACGATTCATTCCT
CTCTCGGCGCACCACAGGCCAGCATTTCCAGGTCCGCCCGCTCGTTCTTT
GCTCTCACTGTCACTTCAAATAAGTGTCACTTCAGTACCGAGGCCGTCGC
CGCTGTCTTTGGTCTCTCTGCACCCAGTGCTTTCGGCCTCCGCACTCCCA
GTCAGCGCTCCAACCAGTCAGGGCTCCCGTTTGGCGCAGCATTCTGCACC
TCGCGCACTCCCTCTTTGTTTGCACTCATCGATAACCAGCAGTCATCCTC
GCATGCCCCGCAATCAACCATCATCGGTGCCGTCATCCACGTCAGCATCC
ACCACGCGTCTCCGCAAGCAGATATTCCTCTCTTTCCGTGTCCCTCTCTG
TCTCCCTCTCTCACGCTCTCTCTACTGTCTTTCTCATTCTTCTCTTCTCT
CTCATGTGTTACAGCAGTAGTCACCTGCTCCTCAGTCCAACAACTCAGTC
GCTCGGTGACAACTCAGTCGCTCGGTGACACTGTTCTCGTTTCAAACAGT
CTCTAATATAGCTCAGTCTCAGTGGAATCCATGTGTGTATACGAACACAC
GGGATTTAACGTGTACGCACAAACAGCAGTGGAATCCACATAGCAAATCA
ATTTGTGCGCACACAGAGATTTGACTTTTTCACACACAATAGTATCCAGC
TCCTCTCTCATTCTCTCTCTCATGTATTACATCTACAGCAGTAGTAGTCA
CCTTCTCCGTAGGCCAACAACTCAGTCGCTCGGTCGGGTAGTCTCCTCGT
TTCAGTAATTTTGTAGTCTGCAGTCATCGAACATAATAAAGCTCATCAAG
TCTCCGTGAAATCCATGTATGTGTACGCATACACGGGATTCACGTGTACG
CACATACAGTGGAATCCACACAGCAAATCAGTGTGTACGCTTACACTGTA
ATCTGTGTGTACGCATAGTATTACGCATAAACAGGATTTGAGTCTTTGAT
GTGTCTGCAGTCATCCACTGCGCGGGCCAAGTATTGCTCATGGATCCATG
TGTTCGTTTGTACGCACACACACAGGAAGGCAAGGAGAAGCGGAGTTTGT
TCGATCTTGAGTCAGTCGTCGTCAGGTCGTTGCCTGTGCAATCGCAAGAT
ATCCAACCATGGGTGACGCTGCTTCTCGACGCCGCCCGCACGCGTTCGGT
TGCACGCACACGCTCCTCACTCCTCACCAAGCTCTCCCACATCACACTCT
TTAATACCCAGCCTTCGTTGAATATCTCTCCTGCTGCTCTTCTCTTTCGT
AGATGTCGGAAAGGCGCAATAAACATCTTTCAGACGGTAGCCTCTCCTGG
CAGTACAGCGCCAAGCGCAAAACTTTGGCGAAGTCCTTGGGAAGTGTGTA
AACGCCGATTGTGACGGGGCCAACTTGACCCGTTCCTGCCCGACCTTCGG
CGGTTGCGCGAATTACACCAAGAACGGCTGTAAGATTTGCGTGTTATCTA
TCACTGGCATCTCCCGGGATCCCCTGCCTCGGCGCCCCCAACCCTGCTGC
GCCCGATTCGGGGTATATACTTATTAACTGCTGTTGTTGTGTAGCCACCC
GTCGTTCCGCAACTTTTGACGATTTGTTACTGGGGGTGTCCCTGGCATAG
CCCGTCAATCACATTCTCGTTCGGTTCGAGGTTGTTTTTCTTTTGTTTTA
GCGATGGTTTACTTGAGAAACTCATCTTACCAACATCTGGAAAAGCACAT
CATCACGCGCAAATATCACGTGACAATTTGCTGTCGGGACCGGTAAAAAG
CTGCGACATTAAATGCATTCAGCTGGTCATGCTAGAACACATGAACGCGG
GAAAAGCACGTGGAAGAAACATCATTTCCTCGATGCCCACGTCTCATCAG
TCGTGTCTCTAGCAATAAAAAAGTGTCTCAAGCACAAAAACAAGGATCTT
GGAATCGCTTCTCTAAAGCGTGGCGGCGGAAGCCGCCGAAACACTTGTAC
TTTCATCATTTTGTTTTTTTTTGTTGGTTTGCTTGGCTTTCTGGGTCCTC
GTGACGTCCGTGCATGTGTCGCAGTCAGTGCAAGGAATACGCCCCTCAAT
GTCAGCTGCTTGCTGCATTGATCTCGAGAACTTGCTAGCCTGCCAGGCGG
CTGGACACTGTTGTCTTCCTCTAGGAGGAGCGTCTCCTTTCTTCGATTTT
CTGCTGCACGCTCCGTATTCTTTGACTTCAAAATTGTTTGTTTTTCCTGT
GCTCTTTGTAGATATTCCAGTGGTTCGAGGTTGACTTTACCACCAAGATA
GGAAAGGACTCTGTCCTCGATGCCCTGCTGCCCTACATGCCGGAAGACGT
CCGCACGTACGTGAGCGAGAACAAGGACATCTTGAAAGTGGACCACTTCG
AGTACGACTGGAGGATCAATGGCCCTTCTCCTGGCGCACCTGGGAAGGAT
GGCAAATGCTGATTTTGGCCGTTTTTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig67:22467..28793-

>mRNA_Ecto-sp13_S_contig67.17588.1 ID=mRNA_Ecto-sp13_S_contig67.17588.1|Name=mRNA_Ecto-sp13_S_contig67.17588.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67:22467..28793- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATAGCACTCATCACACGAGCCCATTTCGTTGGGCGTGTTGCTGTCCT
TGCCGCTACGGGAGCACTGTCCAGCACCTCATCCCCCAAACACCCCTGCG
CCGAAATGGCGGGTTCCTCTGCCCCCGACTACGCCGCGTGGGACTCGGTT
GTCAAAGCGCACGTCAAGACCTCAGAGATACGGGGGATACCGCTGAACGT
GGTTGATTATCAAGGGGTTCGAGATGATCCGAACTTCGAGACCTTCGTCG
AGTCGCTCAAGAACGCGCCAACATCCGGGCTTGGCAAGGACGCTGAATAC
GCCTTGTGGATAAACACCTACAACGCCCTGGCTATAAAGATGGTGACGGA
CAACCCATGCAAGAAGAGCTTGCTTCGTACCAAGATGATAACCAGCATCA
AAGATATCGGGAGTGTGGTGGCGCCGGTGTGGAAAAAGCCCGCGGGGGTA
GTCGGGGGTGAAACGCTGGCTCTGGATGACGTCGAGAACGTAAAATTGCG
GGACCCCAAGGACTACCCAGCGGACCCTCTCCTGCATGCGTGCATCGTGT
GCGCTTCCGTTAGCTGCCCGGACGTCGCCCTGACCGCCTACAAGCCCGAG
ACCCTGCAGGCGGACATGGAGGCCAACATGAGACTCTTCCTGGCCAACCC
GAAGAAGGGTCTATCGCTCGACAAGGCCAAGGGTGTCATCAAACTTTCCA
AGATATTCCAGTGGTTCGAGGTTGACTTTACCACCAAGATAGGAAAGGAC
TCTGTCCTCGATGCCCTGCTGCCCTACATGCCGGAAGACGTCCGCACGTA
CGTGAGCGAGAACAAGGACATCTTGAAAGTGGACCACTTCGAGTACGACT
GGAGGATCAATGGCCCTTCTCCTGGCGCACCTGGGAAGGATGGCAAATGC
TGA
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