prot_Ecto-sp13_S_contig6694.17577.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6694.17577.1
Unique Nameprot_Ecto-sp13_S_contig6694.17577.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length356
Homology
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A6H5JGF1_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF1_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 2.750e-129
Identity = 312/356 (87.64%), Postives = 318/356 (89.33%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEYKAWLLLKQGSTENKGESPTQADEAAATTAVAPTSRHASVASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPMTEAFVATRVLPSSECERGTATTPVAPGAALPALPXXXXXXASLPTSFPEHPSHDGGTGMAMMHQQAKRQRQEESAAGGDGSISGAGAVPGVMVGVAAGAA-EGIVAMPPMDQESLAARGRSHVPHLTQQQXXXXXXXQTRHSIMQHQRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQLCDTTRVEGPMVVSQPSLHYSV 355
            MWFSRHHRAILR+KNREM+FSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARY+RELAEYKAWLLLKQGSTENKGE PTQAD+AA  TA APTSRHASVA P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       FVAT VLPSSECERG ATTPVAPGAALPALP XXXXXASLPTSFPEHP HDGGTGMAMMHQQAKRQR+EESAA GDGSISGAGAVPGVMVGVAAGAA E IVAMP MDQE+LAARGRSHVPHLTQQQXXXXXXX     IMQH           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QLCDTTRVEGPMVVSQPSLHYSV
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYARELAEYKAWLLLKQGSTENKGEVPTQADKAAVITAAAPTSRHASVALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXFVATSVLPSSECERGKATTPVAPGAALPALPPXXXXXASLPTSFPEHPLHDGGTGMAMMHQQAKRQRREESAAAGDGSISGAGAVPGVMVGVAAGAAVESIVAMPTMDQEALAARGRSHVPHLTQQQXXXXXXXXX--XIMQH-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLCDTTRVEGPMVVSQPSLHYSV 342          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: D7G1C1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C1_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.770e-22
Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48
            MWFSRHHRAILR+KNREM+FSDIGKAVGVLWKSATDEQKRPFDDLSAE
Sbjct:    1 MWFSRHHRAILRTKNREMSFSDIGKAVGVLWKSATDEQKRPFDDLSAE 48          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A8J2T2D7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T2D7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.880e-16
Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEYKAWLLLKQGSTENKGESP 78
            M+FS+HHR +L+ +N  +TF D+GK VG +WK+AT  +K+PF+DL+A D+ARY+REL EYK   L +Q +  +  + P
Sbjct:   99 MYFSKHHRTLLKRENASLTFGDLGKTVGAMWKAATPGEKKPFEDLAARDRARYARELEEYKKERLAEQEAEVDSDDEP 176          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: F0YAN0_AURAN (HMG box domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAN0_AURAN)

HSP 1 Score: 81.3 bits (199), Expect = 1.070e-15
Identity = 32/60 (53.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEY 60
            M+FS+HHR +L+ +N ++TF D+GK VG +WK+AT ++K+PF+DL+A D+ RY+ EL+EY
Sbjct:   24 MYFSKHHRLLLKRENSDLTFGDLGKTVGAMWKAATPQEKKPFEDLAAADRTRYNSELSEY 83          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A7S3JW32_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW32_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.470e-14
Identity = 35/62 (56.45%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEYKA 62
            M+FS+HHR +L+ +N  +TF D+GK VG +WK+AT E+KRPF++L+AEDK RY  EL +YK+
Sbjct:  109 MYFSKHHRMLLKQENSYLTFGDLGKTVGAMWKAATPEEKRPFEELAAEDKNRYVNELHDYKS 170          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A2T9Z5D4_9FUNG (HMG box domain-containing protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9Z5D4_9FUNG)

HSP 1 Score: 61.6 bits (148), Expect = 1.650e-8
Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEYKA 62
            M+FS+ +R  ++ +N   TF ++GK +G +WKS TDEQK+PF+  + +DK RY  E A Y+A
Sbjct:   28 MFFSQEYRGKVKKENPAATFGELGKILGEMWKSMTDEQKKPFNLKAEKDKKRYETEKANYQA 89          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A5C5G4Q3_9BASI (High mobility group box domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G4Q3_9BASI)

HSP 1 Score: 61.6 bits (148), Expect = 2.640e-8
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEYKAWLL 65
            M FS+  R++++ +N ++TF +IGK +GV WK AT+  K+P+++ +  DK RY +E A Y   LL
Sbjct:   33 MHFSQDMRSVVKEENPDVTFGEIGKLLGVKWKEATENDKKPYEEKAKADKERYEKEKAAYDVRLL 97          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A0S1MK77_PHAPC (HMG box domain-containing protein n=1 Tax=Phakopsora pachyrhizi TaxID=170000 RepID=A0A0S1MK77_PHAPC)

HSP 1 Score: 60.5 bits (145), Expect = 5.710e-8
Identity = 25/60 (41.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEY 60
            M+FS+  R  ++++N E++F +IG+ +G  WKS +DE+K+P++D++  DK R+  E AEY
Sbjct:   42 MYFSQDWRERIKAENPEVSFGEIGRLLGQKWKSLSDEEKKPYEDMAGRDKKRHEAEKAEY 101          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: A0A2T9YT52_9FUNG (HMG box domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YT52_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.060e-7
Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEYKAWL 64
            M+FS+ +R  ++ +N + TF  +GK +G +WK+ TDEQK+P+   + +DK RY  E A Y+A L
Sbjct:   27 MFFSQEYREKVKKENPDATFGQLGKILGEMWKTMTDEQKKPYALKAEKDKQRYETEKANYQATL 90          
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Match: F4RQM9_MELLP (HMG box domain-containing protein (Fragment) n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RQM9_MELLP)

HSP 1 Score: 58.5 bits (140), Expect = 1.590e-7
Identity = 24/60 (40.00%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDKARYSRELAEY 60
            M+FS+  R  ++++N E++F +IG+ +G+ WKS  +E+K+P++D++  DK R+  E AEY
Sbjct:   21 MFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDKKRHETEKAEY 80          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6694.17577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JGF1_9PHAE2.750e-12987.64HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7G1C1_ECTSI1.770e-2295.83HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A8J2T2D7_9STRA1.880e-1648.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YAN0_AURAN1.070e-1553.33HMG box domain-containing protein (Fragment) n=1 T... [more]
A0A7S3JW32_9STRA3.470e-1456.45Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A2T9Z5D4_9FUNG1.650e-845.16HMG box domain-containing protein n=2 Tax=Harpella... [more]
A0A5C5G4Q3_9BASI2.640e-841.54High mobility group box domain-containing protein ... [more]
A0A0S1MK77_PHAPC5.710e-841.67HMG box domain-containing protein n=1 Tax=Phakopso... [more]
A0A2T9YT52_9FUNG1.060e-742.19HMG box domain-containing protein n=1 Tax=Smittium... [more]
F4RQM9_MELLP1.590e-740.00HMG box domain-containing protein (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..331
NoneNo IPR availablePANTHERPTHR46040FAMILY NOT NAMEDcoord: 2..331
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 1..62
e-value: 2.1E-10
score: 50.6
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 1..61
e-value: 2.3E-13
score: 50.3
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 1..61
score: 13.956
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 1..63
e-value: 4.4E-15
score: 57.8
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6694contigEcto-sp13_S_contig6694:1804..3729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6694.17577.1mRNA_Ecto-sp13_S_contig6694.17577.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6694 2..3810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6694.17577.1 ID=prot_Ecto-sp13_S_contig6694.17577.1|Name=mRNA_Ecto-sp13_S_contig6694.17577.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=356bp
MWFSRHHRAILRSKNREMTFSDIGKAVGVLWKSATDEQKRPFDDLSAEDK
ARYSRELAEYKAWLLLKQGSTENKGESPTQADEAAATTAVAPTSRHASVA
SPAPAIAAAAAAAAATTTPSEVPVPATTATAATPVAPPPIPAPPMTEAFV
ATRVLPSSECERGTATTPVAPGAALPALPPPPLPPASLPTSFPEHPSHDG
GTGMAMMHQQAKRQRQEESAAGGDGSISGAGAVPGVMVGVAAGAAEGIVA
MPPMDQESLAARGRSHVPHLTQQQQQQQQFQQTRHSIMQHQRGRQQHQHQ
HHQYQHQQQQQQQQQQQQQQQQQQQRKHQNQHQLCDTTRVEGPMVVSQPS
LHYSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf