prot_Ecto-sp13_S_contig6691.17572.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6691.17572.1
Unique Nameprot_Ecto-sp13_S_contig6691.17572.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6691.17572.1 vs. uniprot
Match: D8LPQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ7_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.330e-19
Identity = 53/78 (67.95%), Postives = 55/78 (70.51%), Query Frame = 0 
Query:   12 RGRERPPFPPGGVDGAPDGKYDSAGRGSEAVGPNARGGGXGVAPLEPPNNLSGPPGPRKGGRDRAMLGXXXXXSDRPM 89
            RG ERPPFPPGGVDGAP+GKYDSAGRG E VGPNAR   X        NNLSG PGPR+GGR  AMLG      DRPM
Sbjct: 1002 RGSERPPFPPGGVDGAPEGKYDSAGRGPEPVGPNARXXXXXXXXXXXXNNLSGAPGPRQGGR--AMLGGGGGGPDRPM 1077
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6691.17572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPQ7_ECTSI1.330e-1967.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6691contigEcto-sp13_S_contig6691:6634..7534 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6691.17572.1mRNA_Ecto-sp13_S_contig6691.17572.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6691 6632..7534 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6691.17572.1 ID=prot_Ecto-sp13_S_contig6691.17572.1|Name=mRNA_Ecto-sp13_S_contig6691.17572.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp
GSWRGRGVGGGRGRERPPFPPGGVDGAPDGKYDSAGRGSEAVGPNARGGG
GGVAPLEPPNNLSGPPGPRKGGRDRAMLGGGGGGSDRPMGGPERGPGLE
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