prot_Ecto-sp13_S_contig66733.17547.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66733.17547.1
Unique Nameprot_Ecto-sp13_S_contig66733.17547.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
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BLAST of mRNA_Ecto-sp13_S_contig66733.17547.1 vs. uniprot
Match: D8LF72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF72_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.960e-38
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0 
Query:    1 GRLPVRVYLTLPHEELDKDNPVADNSGGGGRKDSVGGVCDEKPTPWSGDGGLVSWNRVKLFSDGSLG 67
            GRLPVRVYLTLPHEELDKDNPVADN GGGGRK+SVGGVCDEKPTPWSGDGGLVSWNRVKLFSDGSLG
Sbjct:  263 GRLPVRVYLTLPHEELDKDNPVADNFGGGGRKESVGGVCDEKPTPWSGDGGLVSWNRVKLFSDGSLG 329
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BLAST of mRNA_Ecto-sp13_S_contig66733.17547.1 vs. uniprot
Match: A0A6H5L9Q1_9PHAE (Amidohydro_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Q1_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.430e-37
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0 
Query:    1 GRLPVRVYLTLPHEELDKDNPVADNSGGGGRKDSVGGVCDEKPTPWSGDGGLVSWNRVKLFSDGSLG 67
            GRLPVRVYLTLPHEELDKDNPVADNSGGGGRK+SVG VCD+KPTPWSG+GGLVSWNRVKLFSDGSLG
Sbjct:   53 GRLPVRVYLTLPHEELDKDNPVADNSGGGGRKESVGEVCDKKPTPWSGNGGLVSWNRVKLFSDGSLG 119
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66733.17547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF72_ECTSI1.960e-3897.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9Q1_9PHAE1.430e-3794.03Amidohydro_3 domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66733contigEcto-sp13_S_contig66733:53..253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66733.17547.1mRNA_Ecto-sp13_S_contig66733.17547.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66733 53..253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66733.17547.1 ID=prot_Ecto-sp13_S_contig66733.17547.1|Name=mRNA_Ecto-sp13_S_contig66733.17547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
GRLPVRVYLTLPHEELDKDNPVADNSGGGGRKDSVGGVCDEKPTPWSGDG
GLVSWNRVKLFSDGSLG
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