prot_Ecto-sp13_S_contig6673.17546.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6673.17546.1
Unique Name	prot_Ecto-sp13_S_contig6673.17546.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	305

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: A0A6H5L6J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J8_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 6.010e-46
Identity = 96/147 (65.31%), Postives = 114/147 (77.55%), Query Frame = 0

Query:   10 AQPNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGATRETPVHVATELGSSQGVAILLRHGADANKLDGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSLNVTDKL 156
            A+P+ R G  D   LTALH+A+SN    V+DALVEAGA++D QGG T ETP+H+AT+LGSS+ VA LL+  AD NKL+GDQ+SAL L      AAIVHVLLA GAQPNLRGG+DGKTALDLAA+G H +A TAL+ HR SLN TDKL
Sbjct:  123 AKPSPRHG--DNVSLTALHIAVSNEQAGVVDALVEAGADIDVQGGETCETPLHLATKLGSSEAVASLLKLEADENKLNGDQYSALHLXXXXXXAAIVHVLLATGAQPNLRGGEDGKTALDLAALGRHVEAATALVQHRASLNATDKL 267

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: A0A6H5JW93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW93_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.950e-32
Identity = 86/145 (59.31%), Postives = 92/145 (63.45%), Query Frame = 0

Query:   12 PNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGATRETPVHVATELGSSQGVAILLRHGADANKLDGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSLNVTDKL 156
            PNLRAGEDD+ GL                       EVDAQ         HV              +H  DAN ++GDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGG+DGKTALDLA VGGH +AVTALLLHRPSLNV DKL
Sbjct:  294 PNLRAGEDDQMGLXXXXXXXXXXXXXXXXXXXXXXXEVDAQ------MVQHV--------------KH-PDANNVNGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGEDGKTALDLATVGGHAEAVTALLLHRPSLNVMDKL 417

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: D7FJ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ90_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 6.290e-29
Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    1 MVQALLAAGAQPNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGATRETPVHVATELGSSQGVAILLRHGADANKLDGDQFSA 93
            MV +LLAA A PNLRAG+D+K  LTALH+AISN +TVVIDALVEAGAEVDAQGGAT ETP+H+AT+L S   VA+LL H AD NK++G+Q+SA
Sbjct:    1 MVYSLLAASAHPNLRAGKDEKADLTALHLAISNKDTVVIDALVEAGAEVDAQGGATCETPLHLATKLESFNAVAMLLAHEADPNKMNGNQYSA 93

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: D8LJC1_ECTSI (Ankyrin repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC1_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.120e-17
Identity = 68/162 (41.98%), Postives = 86/162 (53.09%), Query Frame = 0

Query:    1 MVQALLAAGAQPNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGATRE--TPVHVATELGSSQGVAILLRHGADANKLDGDQF------SALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSLNVTD 154
            ++QAL+  G   N      D  G TALH A   +    ID L+EAGA +DAQGG   E  TP+HVA+E GSS+    L++HGAD ++            +AL LAA  G   IV  LLA G   NLR     K+ALD A  GGH   VT L+ H   ++ TD
Sbjct:  122 VMQALIRHGVDVNA----PDSNGCTALHSAAIGDAVGAIDVLIEAGASIDAQGGEDGEMYTPLHVASEKGSSEAALSLVKHGADVHRSGRMSRWGRSCGNALILAAGRGHTMIVTSLLAAGVNVNLRPAYSDKSALDAAFQGGHADIVTTLIQHGAFVDATD 279

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.800e-17
Identity = 71/192 (36.98%), Postives = 93/192 (48.44%), Query Frame = 0

Query:    2 VQALLAAGAQPNLRAGED-------------------------------DKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGG--ATRETPVHVATELGSSQGVAILLRHGADANKL------DGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSLNVTD 154
            VQALLAAG   +LR G+                                D  GLTALH A + +    I+ L+EAGA +DAQGG    R TP+H+A+E G S+    L++H AD ++       +    +AL LAA  G  A+V  LLA G   NLR    G+ ALD A  GGH   VT L+ H   ++ TD
Sbjct:  131 VQALLAAGGDSSLRYGKGEAFSALGLAARGGHVEVMQALIRHGVDVDAPDSNGLTALHSAATGDAVGAIETLMEAGANIDAQGGEDGARYTPLHMASEKGLSEAALSLVKHRADVHRSGKMSRRERKCCNALSLAAGRGHIAVVKSLLAAGVNVNLRPAYSGELALDAAFQGGHADIVTTLIQHGAFVDATD 322

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 9.080e-14
Identity = 62/154 (40.26%), Postives = 78/154 (50.65%), Query Frame = 0

Query:   11 QPNLRAGED----DKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGG--ATRETPVHVATELGSSQGVAILLRHGADANKLDGD----QFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSLNVTD 154
            Q  +R G D    D  G TALH A   +    ID L+EAGA +DAQGG    R TP+HVA+E GSS+    L++HGAD ++        + +AL LAA  G   IV  LLA G   NLR     K+ALD A  G           H   ++ TD
Sbjct:  193 QALIRHGVDVDGPDSNGCTALHSAAIGDAVGAIDVLIEAGASIDAQGGEDGARYTPLHVASEQGSSEAALSLVKHGADVHRSGKTCRRRRCNALNLAAGRGHTMIVTSLLAAGVNVNLRPAYSDKSALDAAFQGXXXXXXXXXXQHGAFVDATD 346

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: D7FHH2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH2_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.020e-13
Identity = 55/127 (43.31%), Postives = 73/127 (57.48%), Query Frame = 0

Query:    1 MVQALLAAGAQPNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGA--TRETPVHVATELGSSQGVAILLRHGADANK------LDGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLR 119
            ++QAL+  G   N      D  G TALH A   +    I+AL+EAGA+++AQGG    R TP+H+A+E GSS+    L++HGAD ++         D  +AL LAA  G  AIV  LLA GA  NLR
Sbjct:  192 VMQALIRHGVDVNA----PDSNGCTALHSAAMGDTVGAINALIEAGAKINAQGGTYGKRYTPLHMASERGSSKAALSLVKHGADVHRSGKVCSFGRDCSNALNLAARNGHTAIVKTLLAAGANANLR 314

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: D7FJ89_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ89_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 7.050e-13
Identity = 57/144 (39.58%), Postives = 62/144 (43.06%), Query Frame = 0

Query:   12 PNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGATRETPVHVATELGSSQGVAILLRHGADANKLDGDQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSLNVTDK 155
            PNLRAGEDDK GLT                               RETP+H+AT+L SSQGVAILL+ GADANKL+GDQFSAL                             GK                  LLHRPSLN TDK
Sbjct:  294 PNLRAGEDDKAGLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMRETPLHLATKLESSQGVAILLQRGADANKLNGDQFSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKXXXXXXXXXXXXXXXXXXLLHRPSLNATDK 437

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: A0A6H5K8F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F3_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.240e-12
Identity = 47/94 (50.00%), Postives = 56/94 (59.57%), Query Frame = 0

Query:    1 MVQALLAAGAQPNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVDAQGGATRETPVHVATELGSSQGVAILLRHGADANKLDGDQFSAL 94
            MV +LLAA A PNLRAGED+KT L                        VDAQGGAT ETP+H+AT+L     V ILL H AD NK++G+Q+SAL
Sbjct:  241 MVYSLLAASAHPNLRAGEDEKTDLXXXXXXXXXXXXXXXXXXXXXXXXVDAQGGATCETPLHLATKLEPLNAVVILLAHKADPNKMNGNQYSAL 334

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BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Match: D7G744_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G744_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.840e-12
Identity = 59/145 (40.69%), Postives = 81/145 (55.86%), Query Frame = 0

Query:    1 MVQALLAAGAQPNLRAGEDDKTGLTALHM----------AISNNNTVVIDALVEAGAEVDAQGGA---TRETPVHVATELGSSQGVAILLRHGADANKLDG-DQFSALQLAAEGGSAAIVHVLLAEGAQPNLRGGKDGKTALDLA 131
            ++QAL+  GA  N      D  G TALH           A   +    ID L+EAGA ++ QGG     R TP+H+A++ GSS+    L++H AD ++L G +++SAL+LAA  G  AIV  LLA GA  NLR     ++ALD A
Sbjct:  140 VMQALIRHGADVNA----PDSNGCTALHTXXXXXXXXXSAAIGDKVGAIDTLIEAGANINVQGGKYDDARSTPLHMASKKGSSEAALSLVKHRADVHRLKGYERYSALRLAACSGHIAIVKTLLAAGANVNLRPAALCESALDSA 280

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6673.17546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L6J8_9PHAE	6.010e-46	65.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JW93_9PHAE	1.950e-32	59.31	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJ90_ECTSI	6.290e-29	70.97	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LJC1_ECTSI	1.120e-17	41.98	Ankyrin repeat protein (Partial) (Fragment) n=1 Ta...	[more]
A0A6H5JN15_9PHAE	3.800e-17	36.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G751_ECTSI	9.080e-14	40.26	Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo...	[more]
D7FHH2_ECTSI	4.020e-13	43.31	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
D7FJ89_ECTSI	7.050e-13	39.58	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]
A0A6H5K8F3_9PHAE	1.240e-12	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G744_ECTSI	2.840e-12	40.69	Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 157..172 score: 34.82 coord: 271..285 score: 34.83
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 22..51 e-value: 2.6E-4 score: 30.3 coord: 56..85 e-value: 1.8 score: 17.5 coord: 89..118 e-value: 0.097 score: 21.8 coord: 156..185 e-value: 0.04 score: 23.1 coord: 222..251 e-value: 0.063 score: 22.4 coord: 255..284 e-value: 0.0036 score: 26.5 coord: 123..152 e-value: 0.056 score: 22.6 coord: 189..219 e-value: 3.9 score: 16.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 123..155 score: 9.912
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 255..287 score: 11.407
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 156..188 score: 12.262
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 22..54 score: 12.048
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 89..121 score: 9.324
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 56..88 score: 10.9
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 222..254 score: 11.114
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 133..215 e-value: 1.1E-22 score: 82.6
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 217..302 e-value: 1.3E-18 score: 69.1
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..132 e-value: 4.2E-31 score: 109.7
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 2..298
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 94..187 e-value: 7.7E-14 score: 52.0 coord: 194..283 e-value: 8.7E-13 score: 48.7 coord: 1..85 e-value: 4.2E-11 score: 43.3
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..297 score: 78.259
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 125..213 coord: 222..296 coord: 2..100 coord: 75..169 coord: 57..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6673	contig	Ecto-sp13_S_contig6673:528..1442 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6673.17546.1	mRNA_Ecto-sp13_S_contig6673.17546.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6673 3..2272 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6673.17546.1 ID=prot_Ecto-sp13_S_contig6673.17546.1|Name=mRNA_Ecto-sp13_S_contig6673.17546.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
MVQALLAAGAQPNLRAGEDDKTGLTALHMAISNNNTVVIDALVEAGAEVD
AQGGATRETPVHVATELGSSQGVAILLRHGADANKLDGDQFSALQLAAEG
GSAAIVHVLLAEGAQPNLRGGKDGKTALDLAAVGGHTKAVTALLLHRPSL
NVTDKLGRTAMHSAASKNNVPVIDDLAAAGANVNARDKECWTPLHCASSE
GFAEAVTALMRHGGGGKYFHAEDESPLHLALREGHRAAVTALLVGGANPN
LLTDDGSSPLYLAAYFTRLDMVKVLTQHGADVKGTRTNGVSILHTAVVQE
DGGS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom