prot_Ecto-sp13_S_contig6665.17538.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6665.17538.1
Unique Nameprot_Ecto-sp13_S_contig6665.17538.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length350
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6665.17538.1 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 9.930e-91
Identity = 210/296 (70.95%), Postives = 213/296 (71.96%), Query Frame = 0 
Query:   54 EGGGWVAGGPGDGRGGRFGGARGPGRRGNNHKN-NGGDLDLQDLSLPVVIEPSTVTVRGRGWDNRSPGRNGSGGNGNGYRGGEHHDRYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIRARGPPSPRYTGDAPPPQHGGGGRQSTTHVVGRESWDQPRGGSGRGQWNGNGGWXXXXXXXXXXXXXXXXXXXPGD--VGVSSSHRISQRDDSRNNAAPRYGGDHTXXXXXXXXXXXLARHHYMNGGVNGXXXXXXXXXXXXRTERSRSRSPKDRYGGGGGFRDLSPPGRE 346
            EGGGWVAGGP DGRGGRFGGARGPGRRGNN  N NGGDLD QDLSLPVVIEPSTVTVRGRGWDNRSPGRNGSGGNGNGYRGGEHHDRYS                  XXXXXXX        DR+R RGPPSPRY GDAPPPQ     RQSTTHVVGRESWDQPRGGSGRGQWNGNGGW  XXXXXXXXXXXXXXXXX     VGVS                        XXXXXXXXXXX    HY+NGGV+GXX          RTERSRSRSPKDRYGGGGGFRDLSPPGRE
Sbjct:   88 EGGGWVAGGPSDGRGGRFGGARGPGRRGNNKNNDNGGDLDFQDLSLPVVIEPSTVTVRGRGWDNRSPGRNGSGGNGNGYRGGEHHDRYSGGGPDGFDGSDRGGPRYGXXXXXXXGWGGGGFRDRVRLRGPPSPRYAGDAPPPQXXXXXRQSTTHVVGRESWDQPRGGSGRGQWNGNGGWSGXXXXXXXXXXXXXXXXXXXXXXVGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYLNGGVSGXXIGGSPRGRPRRTERSRSRSPKDRYGGGGGFRDLSPPGRE 383
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6665.17538.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2A1_9PHAE9.930e-9170.95Protein kinase domain-containing protein n=1 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6665contigEcto-sp13_S_contig6665:2614..3663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6665.17538.1mRNA_Ecto-sp13_S_contig6665.17538.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6665 2587..3663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6665.17538.1 ID=prot_Ecto-sp13_S_contig6665.17538.1|Name=mRNA_Ecto-sp13_S_contig6665.17538.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=350bp
MTKNDGGGGGGSSPPSGRRRHLSPNGGGGDGTWRNNGAGGSNQESGGGAR
RRGEGGGWVAGGPGDGRGGRFGGARGPGRRGNNHKNNGGDLDLQDLSLPV
VIEPSTVTVRGRGWDNRSPGRNGSGGNGNGYRGGEHHDRYSGGGADGFDG
GDRGGPRYGNAADGGPSWGAGGFRDRIRARGPPSPRYTGDAPPPQHGGGG
RQSTTHVVGRESWDQPRGGSGRGQWNGNGGWSGGGGGGGGGGNINHHHHH
PGDVGVSSSHRISQRDDSRNNAAPRYGGDHTGGSGGGRGPAPLARHHYMN
GGVNGGGIGGSPRGRPRRTERSRSRSPKDRYGGGGGFRDLSPPGRERFGA
back to top