mRNA_Ecto-sp13_S_contig666.17531.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI) HSP 1 Score: 873 bits (2255), Expect = 0.000e+0 Identity = 448/475 (94.32%), Postives = 453/475 (95.37%), Query Frame = 1
Query: 1 MLRRGSAPAQLWSIAGLKAAGAKFWGPLTNVVTPQKLFLFLLFQARPLTPAFPRFASLSQIVYRRLLRVLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMTSVLYVDMNNPAPIGKVSLAGMINSAQNKGVAQSGLPKAVASPKDLNPKGAEGAAKEEDDPRPINGTGVSGGSSVQKSRRVKKPRGGTV 1425
MLRRGSAPAQLWSIAGLKAAGA+FWGPLTNVVTPQKLFLFLLFQ IVYRRLLR+LYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLR LSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIK ALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGA+ATMTSVLYVDMNNPAPIGKV LAGMINSAQNKGVAQSGLPK VA+PKDLNPKGAEGA+ EED PRPINGTGVSGGSSVQKSRRVKKPRGGTV
Sbjct: 1 MLRRGSAPAQLWSIAGLKAAGARFWGPLTNVVTPQKLFLFLLFQ----------------IVYRRLLRLLYRLQVQVWRLVRKHDPQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMTSVLYVDMNNPAPIGKVPLAGMINSAQNKGVAQSGLPKVVAAPKDLNPKGAEGASIEEDGPRPINGTGVSGGSSVQKSRRVKKPRGGTV 459
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA) HSP 1 Score: 355 bits (910), Expect = 5.070e-114 Identity = 191/413 (46.25%), Postives = 265/413 (64.16%), Query Frame = 1
Query: 175 SQIVYRRLLRVLYRLQVQVWRLVRKHD-PQPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMT-SVLYVDMNNPAPIGKVSLAGMINSAQN-KGVAQSGLPKAVASPKDLNPKGAEGAAKEED-------DPRPINGTGVSGGSSV 1383
++++YR+ R L+ +W+ D P+ YE SVLGF+EP+L L+ + V Y + + +LI GW A++++ ++Y Y YFV+E K+ +L W+PSL+ D+R+ +I +RS SV+ W + + + E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL EPF PGDMV+F G EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D + E++ IK AL+ +P +D+LSPFRVH F L + CYFATKS DE+LYLQQ+AL+E+TRVV ++D+ + +G+ + G+++ + VA SG N +GA ++ D P PIN GGSSV
Sbjct: 21 TRLLYRKACRALHAFHHFLWKRAGILDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKE-LGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDISVGFNVPPNPINPLNSGGGSSV 432
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA) HSP 1 Score: 354 bits (908), Expect = 2.000e-111 Identity = 190/413 (46.00%), Postives = 265/413 (64.16%), Query Frame = 1
Query: 175 SQIVYRRLLRVLYRLQVQVWRLVRKHD-PQPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMT-SVLYVDMNNPAPIGKVSLAGMINSAQN-KGVAQSGLPKAVASPKDLNPKGAEGAAKEED-------DPRPINGTGVSGGSSV 1383
++++YR+ R L+ +W+ D P+ YE SVLGF+EP+L L+ + V Y + + +LI GW A++++ ++Y Y YFV+E K+ +L W+PSL+ D+R+ +I +RS SV+ W + + + E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL EPF PGDMV+F G EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D + E++ IK AL+ +P +D+LSPFRVH F L + CYFATKS DE+LYLQQ+AL+E+TRVV ++D+ + +G+ + G+++ + VA SG N +GA ++ D P PIN GG+SV
Sbjct: 211 TRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKE-LGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDFSVGFNVPPNPINPLNSGGGNSV 622
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A6U0TNP3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TNP3_9STRA) HSP 1 Score: 327 bits (837), Expect = 1.860e-102 Identity = 175/387 (45.22%), Postives = 234/387 (60.47%), Query Frame = 1
Query: 79 PLTNVVTPQKLFLFLLFQARPLTPAFPRFASLSQIVYRRLLRVLYRLQVQVWRLVRKHDPQP-YEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATMTSVLYVDMNNPAPIGKVSLAGMINSA 1236
PL ++ P+ L +L+F+ Y R LR+ Y LQ + RL++K P P Y Q+VLGF+EPR LSR + Y + + + N P L ++ + + Y YAGYF++E +RF P W P L DKR+ +I +RS SV W+I ++ + + IS + +P++S+LA GG+GG+AIGLA KDV+SNF GGLMLL+ EPF PGD +TF G G+VERVGWYQTR+R RDTRP YVPN F +TMVTNMDRITHRKFES F ++ +V +L IK AL+ P +DLLSPFR +L+ GL+ +V+CYFATKS DEFL LQQ LEV R V+ T IG + + GM+ A
Sbjct: 77 PLRVLMRPRDLLAYLIFRT----------------CYSRALRLGYLLQTLLSRLLKKDIPPPAYLQTVLGFLEPRFAQLSRLTGLIYLVNVSISAIGLIDLNIRPGLDRLFTKLAYTAYAGYFLNEVRRFVTPRWFPKLAEDKRRAYIVDRSASVFFWTITIVLLLDQISTFFNVPLSSSLALGGVGGVAIGLASKDVVSNFVGGLMLLITEPFTPGDFITFLYQGQWMIGKVERVGWYQTRIRNRDTRPVYVPNAFFVNTMVTNMDRITHRKFESEFHIQLDSFAQVEGLLDDIKIALQGFPKLDLLSPFRANLIAVESDGLRFSVLCYFATKSLDEFLMLQQKVFLEVGRCVESRGLTWAFPRRTIDVRAREIGSLMVEGMMEDA 447
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A7S0SR49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR49_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.020e-79 Identity = 131/276 (47.46%), Postives = 180/276 (65.22%), Query Frame = 1
Query: 334 YALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLS-PFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATM 1158
Y +K + I + P +++ V Y Y F D K FL +++P+L A++R+ ++ RS SV+ W + +L E++S YL++P++STLAFGG GGLA+GL+ +DV +NF GG++LL EPF PGDMVTF+ G GRVERVGW QTR+RGRDTRPTYVPN F T VTNM+RITHRKFE+ LRY D +++++ IK L+ +P +D ++ PFR V L I V CYF+TKS DEFL LQQ A LE+ + V NA++
Sbjct: 5 YLIKLLNLLFILMNLSVKPDFHIIVARVSYAIYLTNFFDMFKLKFLNLFLPNLNANRRQSYVVQRSSSVILWVVGVLIACEMVSTYLKVPLSSTLAFGGFGGLALGLSARDVAANFLGGILLLFNEPFTPGDMVTFRSGNTELLGRVERVGWGQTRIRGRDTRPTYVPNSHFVQTAVTNMERITHRKFEAIVPLRYQDHAVMSDVVTKIKEGLRKIPKLDTMTQPFRCSFVKVGSYSLDIEVTCYFSTKSIDEFLPLQQAANLEIIKAVYSCNASL 280
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A6H5L1M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M0_9PHAE) HSP 1 Score: 248 bits (632), Expect = 2.790e-77 Identity = 129/165 (78.18%), Postives = 133/165 (80.61%), Query Frame = 1
Query: 475 VWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGK-------------------------------DVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMD 876
+WIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGK DVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMV++ +
Sbjct: 1 MWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKEALFVACVGIHGPRSPPLRSSLAVVCSVAKKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVSSRE 165
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A835ZID6_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID6_9STRA) HSP 1 Score: 249 bits (637), Expect = 7.000e-71 Identity = 131/258 (50.78%), Postives = 165/258 (63.95%), Query Frame = 1
Query: 181 IVYRRLLRVLYRLQVQVWRLVRKHDP-------QPYEQSVLGFVEPRLRMLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKR----------------FFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRIT 885
+VY++ LRV+Y LQ + R + +P+EQS LGF+EPRLR L+R + Y + L G+ P +S VV YAGYF+DE KR F+LPV P L+ D RK FIYNR+ SVLTW++ L + +VISA+L IP+ ST+AFGG GG+A G A K + NFFGGL LLL+EPF+PGDMV F+ GG EGRVERVGWYQTRLRGRDTRPTY+PN +F +VTNMDRI+
Sbjct: 222 LVYKKALRVIYGLQAKAMRAMASRSGSGAPAAVKPFEQSWLGFLEPRLRSLTRVMAGLYVANGALGGLANLGYRLRPGTQDFVSTVVATLYAGYFIDELKRQQRSRDAFCCLSCAPQFYLPVIWPELQNDMRKAFIYNRTTSVLTWTLVALGLLQVISAFLHIPLASTMAFGGAGGIAFGFAAKGIFENFFGGLTLLLSEPFVPGDMVHFEYGGEVMEGRVERVGWYQTRLRGRDTRPTYIPNNVFLSNLVTNMDRIS 479
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A2U2AKE7_9GAMM (Mechanosensitive ion channel protein MscS n=2 Tax=Ignatzschineria TaxID=112008 RepID=A0A2U2AKE7_9GAMM) HSP 1 Score: 156 bits (394), Expect = 2.770e-39 Identity = 93/253 (36.76%), Postives = 135/253 (53.36%), Query Frame = 1
Query: 496 ADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQ--GAN-ATMTSVLYVDMNNPAPIGKVSLAGMINSAQNK 1245
ADK I R L ++ + I LL E + + ++ + FGGIGG+AIG A KDVLSNFF G+ML PF GD + + EG V+ +GW T++ D RP Y+PN +FS V N R+T+R+ + LRY D+ KVA ++ I+ L+ P IDL V+ DF +S L I + C+ T + E+L QQ L++ +V GA+ A T +LY+D N A ++ I A N+
Sbjct: 124 ADKTSAKIITRVLKIVIFLIVLLLFGE----HFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDSDKVAAVVNDIRTMLQQNPKIDLTQTLLVYFNDFGDSSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLDNNEGALQVQIKEDPAITPAMNR 370
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A2U2AKG0_9GAMM (Mechanosensitive ion channel protein MscS n=1 Tax=Ignatzschineria indica TaxID=472583 RepID=A0A2U2AKG0_9GAMM) HSP 1 Score: 152 bits (383), Expect = 1.370e-38 Identity = 90/236 (38.14%), Postives = 126/236 (53.39%), Query Frame = 1
Query: 496 ADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQ--GAN-ATMTSVLYVDMNNPA 1194
ADK I R L + + I LL E + + ++ + FGGIGG+AIG A KDVLSNFF G+ML PF GD + + EG V+ +GW T++ D RP Y+PN +FS V N R+T+R+ + LRY DA KV ++ I+ L+ P IDL V+ F ES L I + C+ T + E+L QQ L++ +V GA+ A T +LY+D N A
Sbjct: 48 ADKTSAKIITRVLKIAIFLIVLLLFGE----HFGLSLSGLMTFGGIGGIAIGFASKDVLSNFFSGVMLFFERPFNIGDWINSPDR--KIEGVVKEIGWRSTKIMTFDNRPLYIPNALFSSISVENPGRMTNRRINTEIGLRYEDADKVNAVVNDIRTMLQQNPKIDLTQTLLVYFNAFGESSLNIMIYCFTKTVKWAEWLEAQQEVYLKIIEIVHKNGADFADTTQLLYLDNNEGA 277
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Match: A0A316FRM7_9GAMM (MscS family membrane protein n=1 Tax=Pleionea mediterranea TaxID=523701 RepID=A0A316FRM7_9GAMM) HSP 1 Score: 152 bits (385), Expect = 4.030e-38 Identity = 109/362 (30.11%), Postives = 182/362 (50.28%), Query Frame = 1
Query: 229 VWRLVRKHDPQPYEQSVLGFVEPRLRMLSR-------TLVVAYALKSG-------VRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKAALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGANATM---TSVLYVDMNNPAPIGKVSLAGMINSAQNKGVAQSG 1263
+WR V + EQS + + + LS L + +A+++ + + G + Q++ V+ ++ W+ F++E++R + PS + + + ++S L ++TV VI + + I++ LAFGGIGG+AIG A KD+LSNFFGGLM+ + PF GD V + EG VE++GW QTR+R D RP YVPN +F++ V N R+THR+ + +RY D + I + +K+ L++ ID + F+ S + V Y + +F L+Q LL+V +++ A + TS L+V+M NP LAG+ +S + + G
Sbjct: 34 IWRRVHIRLSKKVEQSNTFWDDALFKALSSPVTWAIWVLGIGFAIETSQSDYLIELLTIDLKGEAKSVQVSNVILIGLFGWFLNRFINESERQIIDKQ-PSKERNDQIDQTTIEAISKLLRVSVMITVVLVILQTIGVSISAVLAFGGIGGIAIGFAAKDLLSNFFGGLMIYMDRPFAVGDWVRSPDRDI--EGVVEKIGWRQTRIRTFDKRPLYVPNAVFNNIAVQNPSRMTHRRIFETVGIRYDDVGVMKPITEKVKSMLQEHDKIDQNQALITNFNAFSSSSVDFFVYAYTHITDWIKFHELKQEILLKVAEIIEQEGAEIAFPTSTLHVNMKNP------QLAGLESSTSDNNESSGG 386 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig666.17531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig666.17531.1 >prot_Ecto-sp13_S_contig666.17531.1 ID=prot_Ecto-sp13_S_contig666.17531.1|Name=mRNA_Ecto-sp13_S_contig666.17531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=476bp MLRRGSAPAQLWSIAGLKAAGAKFWGPLTNVVTPQKLFLFLLFQARPLTPback to top mRNA from alignment at Ecto-sp13_S_contig666:6581..11109- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig666.17531.1 ID=mRNA_Ecto-sp13_S_contig666.17531.1|Name=mRNA_Ecto-sp13_S_contig666.17531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4529bp|location=Sequence derived from alignment at Ecto-sp13_S_contig666:6581..11109- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig666:6581..11109- >mRNA_Ecto-sp13_S_contig666.17531.1 ID=mRNA_Ecto-sp13_S_contig666.17531.1|Name=mRNA_Ecto-sp13_S_contig666.17531.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp13_S_contig666:6581..11109- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |