mRNA_Ecto-sp13_S_contig12054.1753.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12054.1753.1
Unique NamemRNA_Ecto-sp13_S_contig12054.1753.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: D8LSE9_ECTSI (Obg-like ATPase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE9_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 8.870e-132
Identity = 198/236 (83.90%), Postives = 198/236 (83.90%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQE                                     WMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQA GVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK
Sbjct:  190 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQE-------------------------------------WMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAAGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 388          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A835YVQ5_9STRA (Obg-like ATPase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVQ5_9STRA)

HSP 1 Score: 304 bits (779), Expect = 8.800e-100
Identity = 153/236 (64.83%), Postives = 174/236 (73.73%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            KVL W+ + R  VRFG WT  +VEVLN+ QLLTAKE+VYLVNLSKRD+LRKANKWLPK+   V   GGGQ+IPFSVEFEQE                                     W+DE++ GTL+AYK ANPT+K+ M RILK GY +L LIHYFT+GADEV+ WTIKDGWLAPQA GVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGK+RQQGK+YVVQD D+I+FK
Sbjct:  190 KVLAWMRDERKQVRFGEWTPAEVEVLNRHQLLTAKEIVYLVNLSKRDFLRKANKWLPKVNEAVAAAGGGQIIPFSVEFEQE-------------------------------------WVDEDMGGTLEAYKAANPTYKSMMARILKTGYQSLQLIHYFTAGADEVKAWTIKDGWLAPQAAGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKMRQQGKRYVVQDGDIIYFK 388          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A7S3XQT2_HETAK (Obg-like ATPase 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQT2_HETAK)

HSP 1 Score: 288 bits (737), Expect = 3.540e-93
Identity = 145/236 (61.44%), Postives = 169/236 (71.61%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            ++LD+L   R P+RFG W+ H+++VLN FQLLTAKEV+YLVNLSKRDYLRKAN+WLP+I   V+  GGG +IP SV FEQE+  +                                     E    L AYKEANPTHK+A+ RILKAGY+AL LIHYFT G+DEV+GWTIKDGWLAPQA GVIHTDFE+GFICAEV ++EDLKELG EEAVKKAGKLRQQGKKYVV D D+IFFK
Sbjct:  206 RILDFLENERKPIRFGEWSTHEIDVLNNFQLLTAKEVIYLVNLSKRDYLRKANRWLPRINEAVQAQGGGLIIPLSVAFEQEILDIEL----------------------------------NEGVEALTAYKEANPTHKSALPRILKAGYNALQLIHYFTCGSDEVKGWTIKDGWLAPQAAGVIHTDFERGFICAEVQSYEDLKELGSEEAVKKAGKLRQQGKKYVVADGDIIFFK 407          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A7S2V0U7_9STRA (Obg-like ATPase 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0U7_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.080e-88
Identity = 145/238 (60.92%), Postives = 170/238 (71.43%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGT--LDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            K+L ++ E R  VRFG WTA D+EVLN+ QLLTAKE+VYLVNLSKRDYLRKANKWLP+I   V+  GGGQ+IPFSV FEQE+                                      D EL+G   L+ Y +ANPTHK+A+ RIL+ GYHAL LIH+FT G+DEV+GWTI+DG LAP+A GVIH+DFE+GFICAEV  FEDLKELG EEAVKK+GKLRQQGKKYVVQD D+IFFK
Sbjct:  192 KILKFMEEERKWVRFGEWTAQDIEVLNQHQLLTAKEIVYLVNLSKRDYLRKANKWLPRINEAVQGAGGGQIIPFSVAFEQEL-------------------------------------YDLELSGKEQLEEYLKANPTHKSALPRILRMGYHALQLIHFFTCGSDEVKGWTIRDGKLAPEAAGVIHSDFERGFICAEVQAFEDLKELGSEEAVKKSGKLRQQGKKYVVQDGDIIFFK 392          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: H3G8X2_PHYRM (Obg-like ATPase 1 n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G8X2_PHYRM)

HSP 1 Score: 241 bits (616), Expect = 3.460e-75
Identity = 129/237 (54.43%), Postives = 159/237 (67.09%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQ-MIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            K+ +WL   +  V FGTW+A +VE+LN  QLLTAK VVYL+N+SKRDYLRK+NK+LPKI   ++E GG + ++P S EFE E+                                     +D E  G L+ Y++ NPTHK+ + R+L+ GYHAL LIH+FT+G DEVRGWTI+ G +APQA GVIHTDFEKGFI AEV  F DLKELG EEAVKKAGKL+QQGKKY VQD D+IFFK
Sbjct:  189 KIQEWLESGK-DVSFGTWSAPEVELLNTMQLLTAKPVVYLINVSKRDYLRKSNKYLPKIAEYIKERGGNEPVLPISCEFELEM-------------------------------------LDLEAGGELETYQKENPTHKSILNRVLRMGYHALGLIHFFTAGKDEVRGWTIRKGRMAPQAAGVIHTDFEKGFIMAEVQAFADLKELGTEEAVKKAGKLKQQGKKYEVQDGDIIFFK 387          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A024FXT5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXT5_9STRA)

HSP 1 Score: 236 bits (601), Expect = 1.920e-73
Identity = 131/236 (55.51%), Postives = 154/236 (65.25%), Query Frame = 1
Query:    4 VLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGG-QMIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            + +WL   +  V FG W+A ++ +LN  QLLTAK VV+LVN+SKRDYLRKANK+LPKI   V E GGG Q+IP S EFE E+                                     +D +  G L  Y++ NPTHK+ + RILK GYHAL LIH+FT+G DEVRGWTI+ G LAPQA GVIHTDFEKGFI AEV  F DLKE G EEAVKKAGKL+QQGKKY VQD D+IFFK
Sbjct:  149 IQEWLQSGK-DVSFGNWSALEISLLNTMQLLTAKPVVFLVNVSKRDYLRKANKYLPKIAEYVTERGGGEQIIPLSCEFELEL-------------------------------------LDLDAGGQLAEYQKENPTHKSVLNRILKMGYHALGLIHFFTAGKDEVRGWTIRKGRLAPQAAGVIHTDFEKGFIMAEVQAFADLKEHGTEEAVKKAGKLKQQGKKYEVQDGDIIFFK 346          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A3R7H400_9STRA (Obg-like ATPase 1 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3R7H400_9STRA)

HSP 1 Score: 237 bits (604), Expect = 2.210e-73
Identity = 130/236 (55.08%), Postives = 155/236 (65.68%), Query Frame = 1
Query:    4 VLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQ-MIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            + +WL   +  V FGTW+A +VEVLN  QLLTAK V YL+N+SKRDYLRK+NK+LPKI   ++E GG + +IP S EFE E+                                     +D E  G L+ Y + NPTHK+ + R+LK GY AL LIH+FT+G DEVRGWTI+ G LAPQA GVIHTDFEKGFI AEV  F DLKELG EEAVKKAGKL+QQGKKY VQD D+IFFK
Sbjct:  190 IQEWLEAGK-DVSFGTWSAVEVEVLNTMQLLTAKPVAYLINVSKRDYLRKSNKYLPKIAEYIKERGGNEPVIPLSCEFELEL-------------------------------------LDLEAGGQLETYFKENPTHKSILNRVLKMGYSALSLIHFFTAGKDEVRGWTIRKGRLAPQAAGVIHTDFEKGFIMAEVQAFADLKELGSEEAVKKAGKLKQQGKKYEVQDGDIIFFK 387          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A3F2S2A5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2A5_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.180e-72
Identity = 129/236 (54.66%), Postives = 154/236 (65.25%), Query Frame = 1
Query:    4 VLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQ-MIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            + +WL   +  V FGTW+A +VEVLN  QLLTAK V YL+N+SKRDYLRK+NK+LPKI   ++E GG + +IP S EFE E+                                     +D E  G L+ Y + NP HK+ + R+LK GY AL LIH+FT+G DEVRGWTI+ G LAPQA GVIHTDFEKGFI AEV  F DLKELG EEAVKKAGKL+QQGKKY VQD D+IFFK
Sbjct:  210 IQEWLEAGK-DVSFGTWSAVEVEVLNTMQLLTAKPVAYLINVSKRDYLRKSNKYLPKIAEYIKERGGNEPVIPLSCEFELEL-------------------------------------LDLEAGGQLETYFKENPAHKSILNRVLKMGYSALSLIHFFTAGKDEVRGWTIRKGRLAPQAAGVIHTDFEKGFIMAEVQAFADLKELGSEEAVKKAGKLKQQGKKYEVQDGDIIFFK 407          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A6U4FJK5_9STRA (Obg-like ATPase 1 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FJK5_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.080e-71
Identity = 125/238 (52.52%), Postives = 154/238 (64.71%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQMIPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAG--TLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            KVL ++ E    VRFG+WT  D+E LNK+QLLT+KEVVYLVNLSKRDYLR  NKWLPKIQ  V+  GGG +IPFSVEFEQE+                                     +D E+AG   + AY + NPTHK+ + RILK GY ALHLIH+FT GADEVRGWTI+ G  A +A GVIH+D    FI AEV  F+DLK+ G++EAV+ AG  R +GKKYV++D D+ FF+
Sbjct:  190 KVLAFMEEENKGVRFGSWTTQDIETLNKYQLLTSKEVVYLVNLSKRDYLRMGNKWLPKIQQWVQSRGGGTIIPFSVEFEQEM-------------------------------------LDLEMAGEDAVKAYMDENPTHKSMLPRILKTGYQALHLIHFFTCGADEVRGWTIRRGKFAQEAAGVIHSDIMNNFIRAEVFHFKDLKKEGNDEAVQNAGLKRTEGKKYVIKDGDICFFR 390          
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Match: A0A662XR29_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XR29_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.040e-70
Identity = 131/237 (55.27%), Postives = 159/237 (67.09%), Query Frame = 1
Query:    1 KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLRKANKWLPKIQAKVEELGGGQM-IPFSVEFEQEVTSVPTIRNHAFCPDGGSRMTCRXXXXXXXXXLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGYHALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTFEDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK 708
            ++ +WL   +  V FGTW+A +VEVLN  QLLTAK VVYL+N+SKRDYLRK+NK+LPKI   ++E GG +M IP S EFE E+                                     +D +  G L+AY + NPTHK+ + R+LK GYHAL LIH+FT+G DEVRGWTI+ G LAPQA GVIHTDFEKGFI AEV  F DLKELG EEAVKKAGKL+QQGKKY +QD D++FFK
Sbjct: 1128 RIQEWLEAGK-DVSFGTWSAFEVEVLNTMQLLTAKPVVYLINVSKRDYLRKSNKYLPKIAEFIKERGGNEMVIPLSCEFELEM-------------------------------------LDLDAGGQLEAYMKENPTHKSILNRVLKMGYHALGLIHFFTAGKDEVRGWTIRKGRLAPQAAGVIHTDFEKGFIMAEVQAFADLKELGTEEAVKKAGKLKQQGKKYEMQDGDIVFFK 1326          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12054.1753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE9_ECTSI8.870e-13283.90Obg-like ATPase 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YVQ5_9STRA8.800e-10064.83Obg-like ATPase 1 n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3XQT2_HETAK3.540e-9361.44Obg-like ATPase 1 n=1 Tax=Heterosigma akashiwo Tax... [more]
A0A7S2V0U7_9STRA1.080e-8860.92Obg-like ATPase 1 n=1 Tax=Fibrocapsa japonica TaxI... [more]
H3G8X2_PHYRM3.460e-7554.43Obg-like ATPase 1 n=21 Tax=Peronosporaceae TaxID=4... [more]
A0A024FXT5_9STRA1.920e-7355.51Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A3R7H400_9STRA2.210e-7355.08Obg-like ATPase 1 n=3 Tax=Phytophthora TaxID=4783 ... [more]
A0A3F2S2A5_9STRA2.180e-7254.66Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A6U4FJK5_9STRA1.080e-7152.52Obg-like ATPase 1 n=1 Tax=Phaeomonas parva TaxID=1... [more]
A0A662XR29_9STRA2.040e-7055.27Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12054contigEcto-sp13_S_contig12054:539..1681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score391.3
Seed ortholog evalue3.1e-106
Seed eggNOG ortholog2880.D8LSE9
Model size708
KEGG koko:K19788
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.GTP binding
EggNOG OGsCOG0012@1,KOG1491@2759
Cds size708
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462640.5755682-CDS-Ecto-sp13_S_contig12054:538..7851681462640.5755682-CDS-Ecto-sp13_S_contig12054:538..785Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12054 539..785 +
1681462640.5876899-CDS-Ecto-sp13_S_contig12054:927..12241681462640.5876899-CDS-Ecto-sp13_S_contig12054:927..1224Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12054 928..1224 +
1681462640.5983217-CDS-Ecto-sp13_S_contig12054:1517..16811681462640.5983217-CDS-Ecto-sp13_S_contig12054:1517..1681Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12054 1518..1681 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12054.1753.1prot_Ecto-sp13_S_contig12054.1753.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12054 539..1681 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12054.1753.1

>prot_Ecto-sp13_S_contig12054.1753.1 ID=prot_Ecto-sp13_S_contig12054.1753.1|Name=mRNA_Ecto-sp13_S_contig12054.1753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
KVLDWLNEHRLPVRFGTWTAHDVEVLNKFQLLTAKEVVYLVNLSKRDYLR
KANKWLPKIQAKVEELGGGQMIPFSVEFEQEVTSVPTIRNHAFCPDGGSR
MTCRCRCHRRRRRLRYMQWMDEELAGTLDAYKEANPTHKTAMMRILKAGY
HALHLIHYFTSGADEVRGWTIKDGWLAPQAGGVIHTDFEKGFICAEVMTF
EDLKELGDEEAVKKAGKLRQQGKKYVVQDADVIFFK
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mRNA from alignment at Ecto-sp13_S_contig12054:539..1681+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12054.1753.1 ID=mRNA_Ecto-sp13_S_contig12054.1753.1|Name=mRNA_Ecto-sp13_S_contig12054.1753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1143bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12054:539..1681+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGTGCTGGACTGGCTCAACGAGCACAGACTCCCGGTGAGGTTCGGCAC CTGGACGGCGCACGACGTGGAGGTGCTCAACAAGTTCCAGCTCTTGACCG CGAAGGAGGTGGTGTACCTGGTGAACCTCTCGAAGCGGGACTACCTGCGG AAGGCCAACAAGTGGCTGCCGAAGATCCAGGCAAAGGTGGAGGAGCTGGG CGGGGGGCAGATGATCCCCTTCAGCGTCGAGTTCGAGCAGGAGGTGAGTT TTTTTTCTCTGTCCCTTCTAATTTTTTCGGCCCTGCGGCGATGCTTCTTT TTTGCCGAGCCGCGGCTGAGACTGGCCGCCGTGAAGTAGTTTTCATGTTT TGACGGTGCATTCACGGATAGGGAGAGCAGAAACATCAGCCAGCGTACCC ACAATACGCAATCACGCTTTTTGCCCTGACGGTGGCTCACGAATGACTTG CCGCTGCCGCTGCCACCGTCGCCGCCGCCGACTGCGGTATATGCAGTGGA TGGACGAAGAGCTTGCGGGCACGCTAGACGCTTACAAGGAAGCAAACCCC ACGCACAAGACGGCCATGATGCGCATCCTCAAGGCGGGCTACCACGCGCT TCACTTGATCCACTACTTCACCTCGGGGGCGGATGAGGTTCGAGGTTGGA CGATCAAGGACGGCTGGCTGGCGCCGCAAGCCGGGGGTGAGTGGCTGGGG GGGGGGGGCGGGGCACCAAGTGCGGGGAGTTTTGGGGGAAGGGGGGGGTA GCACCAGGTGCGAGCACGAGATGTATGCGGTAGGGGGTTGACCGATATAC CTCGGCGGCTCATGAAAAAAATGGCTGATGATCACATGATCCCCGGTGTT TGTTGGTTGCCCGAAGGTTCCTCCCCTCCTCCTCTCTCCCCTATCCGCCC GTCCAACTGTCTCGCTTTCCCCTCCTTATCTCCTTATCCAACCCTCCCGC CTCCGATTCCGTGGCCTTTCTGTCGCAAGGGGTGATCCACACGGATTTCG AGAAGGGGTTCATCTGCGCGGAGGTGATGACCTTCGAGGACCTGAAGGAG TTGGGGGACGAGGAGGCGGTCAAGAAGGCGGGGAAGCTCCGGCAACAGGG CAAGAAGTACGTCGTCCAGGATGCGGACGTCATTTTCTTCAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12054:539..1681+

>mRNA_Ecto-sp13_S_contig12054.1753.1 ID=mRNA_Ecto-sp13_S_contig12054.1753.1|Name=mRNA_Ecto-sp13_S_contig12054.1753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=708bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12054:539..1681+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGTGCTGGACTGGCTCAACGAGCACAGACTCCCGGTGAGGTTCGGCAC
CTGGACGGCGCACGACGTGGAGGTGCTCAACAAGTTCCAGCTCTTGACCG
CGAAGGAGGTGGTGTACCTGGTGAACCTCTCGAAGCGGGACTACCTGCGG
AAGGCCAACAAGTGGCTGCCGAAGATCCAGGCAAAGGTGGAGGAGCTGGG
CGGGGGGCAGATGATCCCCTTCAGCGTCGAGTTCGAGCAGGAGGTGACCA
GCGTACCCACAATACGCAATCACGCTTTTTGCCCTGACGGTGGCTCACGA
ATGACTTGCCGCTGCCGCTGCCACCGTCGCCGCCGCCGACTGCGGTATAT
GCAGTGGATGGACGAAGAGCTTGCGGGCACGCTAGACGCTTACAAGGAAG
CAAACCCCACGCACAAGACGGCCATGATGCGCATCCTCAAGGCGGGCTAC
CACGCGCTTCACTTGATCCACTACTTCACCTCGGGGGCGGATGAGGTTCG
AGGTTGGACGATCAAGGACGGCTGGCTGGCGCCGCAAGCCGGGGGGGTGA
TCCACACGGATTTCGAGAAGGGGTTCATCTGCGCGGAGGTGATGACCTTC
GAGGACCTGAAGGAGTTGGGGGACGAGGAGGCGGTCAAGAAGGCGGGGAA
GCTCCGGCAACAGGGCAAGAAGTACGTCGTCCAGGATGCGGACGTCATTT
TCTTCAAG
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