mRNA_Ecto-sp13_S_contig666.17530.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig666.17530.1
Unique NamemRNA_Ecto-sp13_S_contig666.17530.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: D7G8R1_ECTSI (Macro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8R1_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 6.860e-186
Identity = 315/394 (79.95%), Postives = 325/394 (82.49%), Query Frame = 2 
Query:  464 GDLTKWKGDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKLAVVKEDSGGSPDDPNAPKASSKSEXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEKQKPEKPECTKPPAGPTSEQGDAAVEPMSISQEENFGTLDGSVEEGTEEPMSQEQTLGGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXPAHGGDSMPQAVSEGPGEDTPSKTAQDGERHVPDRKRPAPDGKALNSSQVMETEEPHKEAAQEAGKGQAEGVETVSCARDSSPPTEKR 1645
            GDLTKWKGDA+VNAANEWMLGGGGVDGAIHRAAGR LL+ACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYE KEVSAPLLRSAIKNSLLLCKENG+KSVAFPAISCGVYGYPAGEAAEIAIDTMLEFS+GIDLIEFVLFGKDTYNPFMKKASEKLAVVKEDSGGSPDD NAPKASS SE                           LEEKQKPE+PEC KPPAGPTSE+GD AVEPM  SQEE FGTLDGSVEEG            GL     XXXXXXXXXXXXXXXXXXXXXXX    G+ MP AVS+G GEDTPSKTAQ GER V DRKRPAPDGKA +SSQ METEEPHKE AQEAG+GQAEGVET S  RDSSPPTEKR
Sbjct:   58 GDLTKWKGDAVVNAANEWMLGGGGVDGAIHRAAGRDLLKACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYENKEVSAPLLRSAIKNSLLLCKENGVKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYNPFMKKASEKLAVVKEDSGGSPDDSNAPKASSTSEPKTVDEGAPNTASGEVSVSAGGAAAPTLEEKQKPEEPECAKPPAGPTSEEGDGAVEPM--SQEETFGTLDGSVEEGXXXXXXXXXXXXGLDEDATXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPMPHAVSQGTGEDTPSKTAQGGERQVQDRKRPAPDGKAADSSQAMETEEPHKEGAQEAGEGQAEGVETASRVRDSSPPTEKR 449
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: A0A6P3ZGA5_ZIZJJ (uncharacterized protein LOC107413982 isoform X1 n=6 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3ZGA5_ZIZJJ)

HSP 1 Score: 204 bits (520), Expect = 4.370e-58
Identity = 102/168 (60.71%), Postives = 123/168 (73.21%), Query Frame = 2 
Query:  464 GDLTKW----KGDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+TKW      DAIVNAA E MLGGGGVDGAIHRAAG  LL+ACY+V      +RCPTGEARITPGF+LP  +VIHTVGP+YET       L+SA  NSL + KEN ++ VAFPAISCGVYGYP  EAA I+I T+ EF++    + FVL+ +D YN ++KKA+E L
Sbjct:   70 GDITKWFVDGSTDAIVNAAEERMLGGGGVDGAIHRAAGPDLLQACYNVPEVRPGVRCPTGEARITPGFQLPVSYVIHTVGPIYETNSDPEAFLKSAYSNSLKVAKENNVQYVAFPAISCGVYGYPYEEAATISISTVKEFANDFKEVHFVLYNEDIYNVWLKKANELL 237
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: UPI0011D2ACB0 (uncharacterized protein LOC115663435 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2ACB0)

HSP 1 Score: 204 bits (520), Expect = 8.100e-58
Identity = 105/168 (62.50%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  464 GDLTKWK----GDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG +LLEACY V      IRCPTGEARIT GFRLPA  VIHTVGP+Y+        LR+A +NSL++ KE  L+ VAFPAISCGVYGYP  EAA IAI T+ E SDG+  + FVLF  D YN ++ KA E L
Sbjct:   92 GDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLEACYKVPEVRPGIRCPTGEARITAGFRLPASHVIHTVGPIYDADSNPQASLRNAYRNSLMVAKEKKLQHVAFPAISCGVYGYPYDEAATIAISTLKESSDGLKEVHFVLFSDDIYNAWLSKAKELL 259
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: A0A2C9VLA2_MANES (Macro domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VLA2_MANES)

HSP 1 Score: 205 bits (521), Expect = 9.130e-58
Identity = 101/168 (60.12%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  464 GDLTKW----KGDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG +L +ACY V      IRCPTGEARITPGF+LPA  VIHTVGP+Y+     A +L++A +NSL + K+N +K +AFPAISCGVYGYP  EAA +AI T+ EF+DG+  + FVLF  D  N ++KKA E L
Sbjct:  107 GDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELRDACYKVPEVQPTIRCPTGEARITPGFKLPASHVIHTVGPIYDPSRNCAAILKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPFEEAAAVAISTVKEFADGLKEVHFVLFSDDIDNVWLKKAKELL 274
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: UPI0005FB6297 (macro domain-containing protein VPA0103 isoform X1 n=2 Tax=Jatropha curcas TaxID=180498 RepID=UPI0005FB6297)

HSP 1 Score: 205 bits (521), Expect = 9.990e-58
Identity = 101/168 (60.12%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:  464 GDLTKW----KGDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG +LL+ACY V      IRCPTGEARITPGF+LPA  VI+TVGP+Y+T    A  L++A +NSL + K+N +K +AFPAISCGVYGYP  EAA ++I T+ EF D +  + FVLF  D YN ++KKA E L
Sbjct:  110 GDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELLDACYKVPEVQPGIRCPTGEARITPGFKLPASHVIYTVGPIYDTDSNPAASLKNAYRNSLTVAKDNNIKYIAFPAISCGVYGYPYEEAAAVSISTIKEFKDDLKEVHFVLFSDDIYNVWLKKAKELL 277
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: A0A5C7GZP7_9ROSI (Macro domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GZP7_9ROSI)

HSP 1 Score: 201 bits (511), Expect = 2.520e-57
Identity = 100/168 (59.52%), Postives = 121/168 (72.02%), Query Frame = 2 
Query:  464 GDLTKW----KGDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+++W      DAIVN ANE MLGGGG DGAIHRAAG QL EACY V      +RCPTGEARITPGF+LPA  VIHTVGP+Y+     A LLRS+ KNSL + KEN ++ +AFPAISCGV+GYP  EAA +AI T+ EF++    + FVLF  D Y+ ++KKA E L
Sbjct:   30 GDISQWFINGSSDAIVNPANERMLGGGGADGAIHRAAGPQLREACYKVPEVRSGVRCPTGEARITPGFKLPASHVIHTVGPIYDVHSNPAALLRSSYKNSLSVAKENNIQYIAFPAISCGVFGYPFEEAATVAISTIKEFANDFKEVHFVLFADDIYSVWLKKAKELL 197
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: A0A6J1JJ63_CUCMA (uncharacterized protein LOC111484918 n=2 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JJ63_CUCMA)

HSP 1 Score: 202 bits (514), Expect = 3.690e-57
Identity = 100/168 (59.52%), Postives = 120/168 (71.43%), Query Frame = 2 
Query:  464 GDLTKW----KGDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+TKW      DAIVN ANE MLGGGG DGAIH AAG  L++ACY V+     IRCPTGEARITPGFRLPA  VIHTVGP+Y        LLRSA +NSL + KEN ++ +AFPAISCGVY YP  EAA IA+ T+ EFS+G+  + FVL+  D YN +++ A+E L
Sbjct:   76 GDITKWFIDGSSDAIVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARITPGFRLPASHVIHTVGPIYNVNSNPQALLRSAYRNSLAVAKENNIQYIAFPAISCGVYRYPFDEAATIALSTVKEFSNGLKEVHFVLYSSDIYNVWLETANELL 243
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: A0A7J0EAM2_9ERIC (Appr-1-p processing enzyme family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0EAM2_9ERIC)

HSP 1 Score: 200 bits (509), Expect = 5.420e-57
Identity = 97/168 (57.74%), Postives = 120/168 (71.43%), Query Frame = 2 
Query:  464 GDLTKWK----GDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+T+W      DAIVN ANE MLGGGG DGA+HR AG +L  ACY+V      +RCPTGEARITPGFRLPA  VIHTVGP+Y+       LLRSA +NSL + KENG++ +AFPAISCG++GYP  EAA +AI T+ EF++    + FVLF  D YN ++ KA+E L
Sbjct:   34 GDITRWSVDGSSDAIVNPANERMLGGGGADGAVHRTAGPELRAACYNVREVRPGVRCPTGEARITPGFRLPASHVIHTVGPIYDVANNPEALLRSAYRNSLRVAKENGIQYIAFPAISCGIFGYPFDEAATVAISTVREFANDFQEVHFVLFADDIYNVWLDKANELL 201
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: A0A7S3BGY7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BGY7_9VIRI)

HSP 1 Score: 202 bits (513), Expect = 6.790e-57
Identity = 103/173 (59.54%), Postives = 121/173 (69.94%), Query Frame = 2 
Query:  458 CTGDLTKWKG----DAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKLAVV 964
            C GDLT+W G    DAIVNAANE MLGGGGVDGAIHRAAG  L  AC +VE  +  +RCPTGEARIT GF LPA  VIHTVGP+YE+ EVS PLL SA  +SL L  ++ LK VAFPAISCGV+GYP G+AA +A+D        ++ + FVLFG DTY  F+  A  +   V
Sbjct:   23 CQGDLTRWAGAAKPDAIVNAANERMLGGGGVDGAIHRAAGPALYAACKEVEQVAPGVRCPTGEARITGGFELPAAHVIHTVGPIYESDEVSEPLLASAYASSLALANQSKLKEVAFPAISCGVFGYPQGDAAGVALDECARGVCDLEAVTFVLFGDDTYAAFLGAAEARFDAV 195
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BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Match: UPI0010AA09FB (uncharacterized protein LOC103437938 n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010AA09FB)

HSP 1 Score: 201 bits (510), Expect = 8.280e-57
Identity = 100/168 (59.52%), Postives = 120/168 (71.43%), Query Frame = 2 
Query:  464 GDLTKWK----GDAIVNAANEWMLGGGGVDGAIHRAAGRQLLEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAPLLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSDGIDLIEFVLFGKDTYNPFMKKASEKL 955
            GD+TKW      DAIVN ANE MLGGGG DGAIHRAAG  LL+ACY V      +RCPTGEARITPGF+LPA  VIHTVGPVY +       L +A +NSL L K N L+ +AFPAISCGVYGYP  EAA ++I T+ EF+DG+  + FVLF  D Y+ ++KKA++ L
Sbjct:   59 GDITKWSVDGSTDAIVNPANEGMLGGGGADGAIHRAAGPDLLQACYSVPEVRPRVRCPTGEARITPGFKLPASHVIHTVGPVYRSGSNPETFLSAAYRNSLTLAKSNNLQHIAFPAISCGVYGYPYDEAATVSISTIKEFADGLKEVHFVLFADDIYDVWVKKANKLL 226
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig666.17530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8R1_ECTSI6.860e-18679.95Macro domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6P3ZGA5_ZIZJJ4.370e-5860.71uncharacterized protein LOC107413982 isoform X1 n=... [more]
UPI0011D2ACB08.100e-5862.50uncharacterized protein LOC115663435 n=1 Tax=Syzyg... [more]
A0A2C9VLA2_MANES9.130e-5860.12Macro domain-containing protein n=1 Tax=Manihot es... [more]
UPI0005FB62979.990e-5860.12macro domain-containing protein VPA0103 isoform X1... [more]
A0A5C7GZP7_9ROSI2.520e-5759.52Macro domain-containing protein n=1 Tax=Acer yangb... [more]
A0A6J1JJ63_CUCMA3.690e-5759.52uncharacterized protein LOC111484918 n=2 Tax=Cucur... [more]
A0A7J0EAM2_9ERIC5.420e-5757.74Appr-1-p processing enzyme family protein n=1 Tax=... [more]
A0A7S3BGY7_9VIRI6.790e-5759.54Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
UPI0010AA09FB8.280e-5759.52uncharacterized protein LOC103437938 n=1 Tax=Malus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig666contigEcto-sp13_S_contig666:451..6572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score545.8
Seed ortholog evalue1.7e-152
Seed eggNOG ortholog2880.D7G8R1
Model size1886
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.ADP-D-ribose binding
EggNOG OGsCOG2110@1,KOG2633@2759
Ec32 ortholog descriptionMacro domain
Ec32 orthologEc-22_002680.1
Cds size1224
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig666.17530.1prot_Ecto-sp13_S_contig666.17530.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig666 875..6334 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463916.4705064-UTR-Ecto-sp13_S_contig666:450..8741681463916.4705064-UTR-Ecto-sp13_S_contig666:450..874Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig666 451..874 +
1681463916.6023781-UTR-Ecto-sp13_S_contig666:6334..65721681463916.6023781-UTR-Ecto-sp13_S_contig666:6334..6572Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig666 6335..6572 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463916.4835477-CDS-Ecto-sp13_S_contig666:874..9671681463916.4835477-CDS-Ecto-sp13_S_contig666:874..967Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 875..967 +
1681463916.500204-CDS-Ecto-sp13_S_contig666:1675..17291681463916.500204-CDS-Ecto-sp13_S_contig666:1675..1729Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 1676..1729 +
1681463916.5104232-CDS-Ecto-sp13_S_contig666:1985..20321681463916.5104232-CDS-Ecto-sp13_S_contig666:1985..2032Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 1986..2032 +
1681463916.5232563-CDS-Ecto-sp13_S_contig666:2764..28221681463916.5232563-CDS-Ecto-sp13_S_contig666:2764..2822Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 2765..2822 +
1681463916.546038-CDS-Ecto-sp13_S_contig666:3110..31791681463916.546038-CDS-Ecto-sp13_S_contig666:3110..3179Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 3111..3179 +
1681463916.5658646-CDS-Ecto-sp13_S_contig666:3503..36021681463916.5658646-CDS-Ecto-sp13_S_contig666:3503..3602Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 3504..3602 +
1681463916.579196-CDS-Ecto-sp13_S_contig666:5128..51971681463916.579196-CDS-Ecto-sp13_S_contig666:5128..5197Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 5129..5197 +
1681463916.5911176-CDS-Ecto-sp13_S_contig666:5599..63341681463916.5911176-CDS-Ecto-sp13_S_contig666:5599..6334Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig666 5600..6334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig666.17530.1

>prot_Ecto-sp13_S_contig666.17530.1 ID=prot_Ecto-sp13_S_contig666.17530.1|Name=mRNA_Ecto-sp13_S_contig666.17530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=408bp
MFTNVAFFHASCTGDLTKWKGDAIVNAANEWMLGGGGVDGAIHRAAGRQL
LEACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYETKEVSAP
LLRSAIKNSLLLCKENGLKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFS
DGIDLIEFVLFGKDTYNPFMKKASEKLAVVKEDSGGSPDDPNAPKASSKS
EPKTADEGAPNTASGEVSPSAGGAAAPTLEEKQKPEKPECTKPPAGPTSE
QGDAAVEPMSISQEENFGTLDGSVEEGTEEPMSQEQTLGGLGEDVTIEEG
TEEPMSQEQTVGGLGEDVTPAHGGDSMPQAVSEGPGEDTPSKTAQDGERH
VPDRKRPAPDGKALNSSQVMETEEPHKEAAQEAGKGQAEGVETVSCARDS
SPPTEKR*
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mRNA from alignment at Ecto-sp13_S_contig666:451..6572+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig666.17530.1 ID=mRNA_Ecto-sp13_S_contig666.17530.1|Name=mRNA_Ecto-sp13_S_contig666.17530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig666:451..6572+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAATGTCCATTTCTTTTTCCGACCGCGGGGTAATCGCACAGCAACCGGAT
GGGTCTACATCGTTAGAGGGATCCACGCAAAATGCCTTGTCTTTCGTGTC
AGAACTCATGGCGCTGTTAACTAAGTTCTTTTCACGAACACACTGTCTGG
CGCTCTCAGAGAGGCAAGAGCACGCACAAAGGAGTTCTATGGGTCGATAT
ATCTCCCCTGTTGCCATATGTAGAAGCTTTCGTTTGAGAAAACCCCGTGA
GAAAAACCTGTCGGTCGGCGAAACAGTATCGGATATGCCGTATGCATCCG
CGGATGCTTTCGCGAATATCGTCGACGATACAGCGCTCATTTTAGTATTG
TCGTTTCGCGCGGTTCCGTGGATCTCCCTTTCGCGTACCATTACTGTACA
TGCAACACCTGCGATTTGTCGTGAATGTTTACCAACGTCGCCTTTTTCCA
CGCATCTTGTACAGGCGACCTAACGAAGTGGAAAGGCGATGCCATTGTGA
ACGCTGCAAACGAATGGGTGAGTTTAACCCTCCAAGTACTGGAAGCCCAA
ACGGGGACACTTGAGGGACACAGCACTCAAGTTGCCTATTTTCCGCACTG
TCGTCACCCTAGGCTCCGCTCTGTGCAACGCACGTGAGAGCTCTTGGTCT
ACGATGCTTGGCTTAGGTGGAACGCTGTGTCGTATGCTGTGTGATGCCTC
TCCTGCGCCTCTGACTTGCTGCACACATCTCCCAACCCGCGTGCCCCCTA
GGTCCTAAAACGGTACATCGCCTGGTCGTGGAAATTTTTGCTGACTTGGC
TTCAGTATCAACAGTACCCCCACGTGTTTTTTTAGGACACTTTTCATTCT
GAAGCCAAGTCACCTTTCTCTAGCAAGTAGCTCAGATTTGGAGGGACTGC
AGCCCCTCGACCAATGACTGACAAATATGGTTGGGGATTTTTTTGTACGA
AGGGACTGGGTAGTAGGAGGGTCAAACTTGCTCCGTTGCCCGTGAAAGAT
AGTGACAAACTGCTATGCTGAGAACCTGAAGCCCGCTGCGGCCAGATCGG
GGTTCCGGGACACGTTTGTCTTCAACATGTGCACAACATTCGTAGTTGGC
ACATTAGTGCAGAGTCTCCAGGCCTAACCAAATATATCCGGCAAGGTGCT
GGCTACAACTTCTTGTCTTGGGATCAAGTTATTGTTGTGATCTAATTACC
ACCCTTTTGGTGCCACGGGATGCAGATGTTGGGAGGAGGAGGCGTAGATG
GGGCAATCCATCGAGCAGCAGGACGGCAGGTAAGCGTTGCGAGTAGTCAC
ATTCCCGTGTAGCGGGGAACGAAACTGGAAGCCTTCTCGATGATACGAAG
CTGGGGGAACAGTAGCACCATTGTCAAGACGACAGTGTTGCGTTCAGCGG
TGGCGGGGTTGAGTGTACGCAGTTTTCGATGAACACACGCGGGGGCGAGC
TGGTTGCACGCCACCGTTGTCTACGAAAGCACAACAACGTTGCGCGCCAT
TCCCCTGGTACATGTTCGTTTTCGTTTTGTCGCAGCTCCTGGAAGCATGC
TATGACGTTGAGCCCAACTCAGAGGACATCCGGTGAGCATGTTATCTCTC
TGATCTTGTGCCGTACGTTTGGAGATGCAGGCAAGGTGCCGCAAGTGGTA
CCTTGCCGATGGATGCGGCACAGTCGCTGCTCACTATTCGCAATGTTTAT
CTGGCATAACCCTATTCCGAATGTATGTGTCTAGCCATCTTGTCTATTCT
GGGCGTCAGACTTCACCTCTCGGTTAACTTTTGATATTTCGGATGCACCA
GCCGGGGTTACGTAGGAGGAAGGCCACTCAGTGTTATTTTTCCTCCACAG
TTCGCCTCCAGCTTGATTCATGTTCAAATTCCGAGAATGGTTGAGTCGTA
CCCTCGTCAACCGTAAACAAAAGTTATATGTTAACCCACGAAATATACAT
GTAGTTGTCCTGCACATTTTGAGCATGATGTGAGAGAATCCCAGGCCGTG
TGACCACGGCGAGCTTCGAACTCACGTTCTTTCGTCAAAAGACTGCGAGA
TTCCCAACTGAATGGACCACCAGGACGACCTTTGCTGGAAAGGGGTACGC
GAATCAGCAGTTGCAGTGTAGACGACGGCGCAAATGTGTAAACGCTGTGC
CTTTGCCATCACTTACGTCGGGTACATACTGTTCCGACCCGACCTTGCAA
AGCGATCGGTCTTGTGGCAAGGTTATCACCAACAGGTGTATGTATGACAT
TCAAATGCATCTGTCTTGGTCTTTCAAGCTTTTCCCCTCGCCGCTGTTGT
TTCTCTTTGCGAAGGTGCCCCACTGGCGAAGCACGCATCACTCCCGGATT
CCGCCTACCCGCCAAGTTCGTGGTACGATACGACTCGTTTGAAGTCGAGA
CCCTGGATATGATGTTGTATACAATACTTATCTACCGAGTACCAGCATTC
GTTATCTTCCGTGTTCAACCAGCGAAACGGCGGTGCAGACATGCGTCAAC
AGCCGTAGTGGTCTCCGTTTTGTCGTAAATCCTGTTGATTCTTTGTCCCA
TTCATGTCGCATCCCGAGGTGCAGTCGTATTCGGTAGTCGATCCTCTGAG
TTACCATATCGTTCTATGCGCCTGTCTCTTTTCGTCTCCTACCTCCTGTC
TTGAGTACAGATCCATACTGTCGGTCCTGTCTACGAAACCAAAGAGGTGT
CAGCGCCGCTCCTTCGATCTGCCATCAAGGTGAGTCAATCGGTTGCAACA
GCTTGTCTACGGAACCCCTTTCCCCCCTTTGTGCGTTTGAGGAATCAGAT
ATGGGTCTGTACTTGATGCGCGAAGACACTCTGGTTAAGAACATTATAAG
GTGGGGCAGCGGAGCACCAACGAGTCCGAGCGATCTGTTCGTAAGATGCT
CAAGAAAGTGCCCATATTATCCCAAAAAGTGCTGAGTTGTACGCCTTCGC
TCAACCCGCTCTCTCACACCCCAAGGACAGGTCTCCATCAATTAACAACT
TTCCGAAGCTTGATGTTGTCCACTGTGCCCCCTGCCCTGTGCTTGATCGC
CAGAATTCGTTGCTGCTGTGCAAGGAGAACGGATTGAAAAGCGTCGCTTT
CCCAGCTATATCCTGCGGCGTCTACGGGTACCCAGCAGGCGAGGCTGCTG
AGGTAAGCCGCGTGACGCATCATGGTGCTGTCCCGAGGATAAGCTTTGGC
TGAGGTCTTTCACGGCGGTGTTTTGGTGCGTTGGGTAATAATCTCCAACA
TAACATTTTAAACAAACTTGCCCGGCTACAAGCATGAGCACTCGCTGTCT
TCTTTCCCTCTTCATGGTGCAGTCGGAGATGGTTTTTGCCGTCTCAAGAT
GGCGCCAGTAGTCGGAACGTTCCGCCTGGAATGGATGTTAATGTTGTGCG
GGTTTCGTAGTGATGTTGTAGTCACAGATGGCATACCGCAGTAGTCGGAG
AGATGGCACCGGTCGGGTAATGGCACCGGTCGGGTAATGGCACCGGTCGG
GGAGATGGCACCGGGATGCGCAAAAAATACAAGAACGGCATGAATTTATT
CGATTTGCGCACCGGGGTCTGTGAGATCACACCGGGTGCGATCTCACCGA
CCCCCAAATCCAAGATTGAACTCCTTTCAGCTGCCGGAATGAGGTATATG
TTCGTACCTTTTGCACGTGGGGACGGCGTCAGCGGAGCGCCACTCCTGTC
CTGTATGTACGTATGCATGGTCGCGATTTATGTGGGATGCCAGTTGCCAA
CCGTACACTGAACCAAACACACAACGTACAAGCCGTACCCACCTTACACA
ACACGAAACTATTGTACTGCTGCGTACGTACTGGTATCCATAGAGGAATA
CCAAACGAAAGCGGGAGACACCTGATACCGTACGTATCGGTGCCTCAGAT
GGACACCACATCGTTTGTTGTCCTTGTCACGCGATAGCCAAACTCGCCTT
CAAACACAAGACCACTCGCTGTGCATGTGAAGCTGTTACGCACCACCGTA
CGTTGCCGTTGGCGATGTGCTTCCAACCATCAGCAACGGTACCTACGAGT
ACGTGTGGTTCTACAAGGAGTAAATAGCACTGTCAACTACGTGTGAATGA
GATCGTGTGCGTGGGTATGCCTACACTGGTATCAATACTATCGTACCGGT
CGGGGAGATCGAACCGGGGTGCGTGCATACCACACTCGTATGTATTCTGT
TTCATTGGGGATGGCACCGGTCGAAGATATCGCACTGGGGTGTCCTGAAA
AAACTTTACGAAGTGATTTATTATTATAGTTGCATTTCCGCACCGGGGTC
GAAGAGGTGGCACCGGGTGCGATCGCTTTGAATATTTTTTCCTCGAGCTT
TTTACAGATGGCACCGGGGTGTGATGAAAAACCCGAGAAAAAAATATTCA
AAAGCGATCACACCCGGTGCCGTCTCTCCACTATTACGGTACTTCAACAT
TCGTGAAGAAACCGCTCAGGGATTGGTTCCGAGAGAGACTACTCAAATAA
GGGCACAGCACGCAGAACGTTGCCTTTGGAACCGATCGGGTTTTATCTTG
AGTGTTGCATGTTGAAAGTCGATGGACTGGGTGGGTCAACCTGATGCAAA
TCGAACGAAACGGTTCTCCGTCTGAGGCTTGATGCAAGTGGGCACCTCGC
GTCCTGACGTGCTTGTATTTCCCGGCAGATCGCCATTGACACTATGCTGG
AGTTCAGCGACGGTATCGACCTCATCGAGTTCGTACTCTTCGGAAAGGTG
AGGCTTAAGTCTACTGGCAGGCACGCCTACTGGATAGCCTAGTACCTCCG
GTGCCACGGGGTGCTTGCCTGTGTGAGTGCTGCGATTTCTCTCGTTGTGG
CCTTGCTCTGTAAAACGGTTTCCCGATGCAGTTCCAGCACTAGACTCAGT
GCCTAGCTGTATCGCTTGGAAGTTGTTGGATTTGGTGAGGTGACGCTTCC
TGCGACGGCCGGTGGTCACACCCAAACGTGGGCTTGTTGTATTCCTGACC
ATCGGCTTGGGGTAGCATTGTGTGGAGACTCCCCGCAAACTTTCTGTCAC
TCATATGGTTGAAGTTCCCGACAGGTTTGGTGATACTGTATGTGCTTGAA
TCATGAGCGATTTACACGCCGTCGTGCTGTAACGCGACATGCTTTGCAGG
ACACATACAACCCGTTCATGAAGAAAGCTTCTGAGAAGCTTGCAGTTGTC
AAGGAGGATTCTGGCGGCTCGCCGGATGACCCCAACGCTCCCAAAGCTTC
CTCCAAGTCAGAGCCCAAGACGGCGGATGAGGGTGCGCCAAACACTGCCT
CTGGCGAAGTCTCTCCTTCGGCAGGCGGAGCTGCCGCCCCTACGTTGGAA
GAGAAACAGAAGCCCGAAAAACCCGAGTGCACCAAACCGCCTGCTGGGCC
GACTTCGGAACAGGGAGATGCTGCCGTTGAGCCGATGTCGATATCGCAAG
AGGAAAATTTCGGTACGCTGGACGGATCCGTTGAAGAAGGCACCGAGGAA
CCCATGTCTCAAGAGCAAACTCTCGGCGGGCTTGGTGAAGACGTGACCAT
CGAAGAAGGCACCGAGGAACCCATGTCCCAAGAGCAAACTGTCGGCGGGC
TTGGTGAAGACGTGACCCCCGCTCATGGAGGCGACTCGATGCCCCAAGCG
GTGTCAGAAGGACCTGGAGAGGACACACCCTCCAAGACGGCGCAAGACGG
CGAGCGACATGTGCCGGACCGGAAACGACCGGCACCTGACGGGAAAGCAC
TAAACAGCAGTCAAGTAATGGAAACGGAAGAACCTCACAAAGAAGCAGCT
CAGGAAGCGGGGAAAGGGCAGGCTGAGGGAGTCGAGACTGTATCCTGCGC
GCGTGACTCGTCTCCGCCGACCGAGAAACGATGAACAGGGTGTTGCAAGA
GACGTGGGTTCGGGGCCGTCGCGGTTGACACCGAGTCACACGCGTTGAAT
AACATGCACGCCATAGCTTTTGTTCGGGACGGCACTGATTGACTGCCTGA
GACTCTCGGGCTATTGGCGTGCTTGATGTGGGAGGCCTTTTCCCTGAGCG
TAAGAGGGTTCTTAACGGTTGTAACAACCAACAATTTTTCGACATTTTTT
CTTCTCAAAGAGACTCAGACCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig666:451..6572+

>mRNA_Ecto-sp13_S_contig666.17530.1 ID=mRNA_Ecto-sp13_S_contig666.17530.1|Name=mRNA_Ecto-sp13_S_contig666.17530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1224bp|location=Sequence derived from alignment at Ecto-sp13_S_contig666:451..6572+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTACCAACGTCGCCTTTTTCCACGCATCTTGTACAGGCGACCTAAC
GAAGTGGAAAGGCGATGCCATTGTGAACGCTGCAAACGAATGGATGTTGG
GAGGAGGAGGCGTAGATGGGGCAATCCATCGAGCAGCAGGACGGCAGCTC
CTGGAAGCATGCTATGACGTTGAGCCCAACTCAGAGGACATCCGGTGCCC
CACTGGCGAAGCACGCATCACTCCCGGATTCCGCCTACCCGCCAAGTTCG
TGATCCATACTGTCGGTCCTGTCTACGAAACCAAAGAGGTGTCAGCGCCG
CTCCTTCGATCTGCCATCAAGAATTCGTTGCTGCTGTGCAAGGAGAACGG
ATTGAAAAGCGTCGCTTTCCCAGCTATATCCTGCGGCGTCTACGGGTACC
CAGCAGGCGAGGCTGCTGAGATCGCCATTGACACTATGCTGGAGTTCAGC
GACGGTATCGACCTCATCGAGTTCGTACTCTTCGGAAAGGACACATACAA
CCCGTTCATGAAGAAAGCTTCTGAGAAGCTTGCAGTTGTCAAGGAGGATT
CTGGCGGCTCGCCGGATGACCCCAACGCTCCCAAAGCTTCCTCCAAGTCA
GAGCCCAAGACGGCGGATGAGGGTGCGCCAAACACTGCCTCTGGCGAAGT
CTCTCCTTCGGCAGGCGGAGCTGCCGCCCCTACGTTGGAAGAGAAACAGA
AGCCCGAAAAACCCGAGTGCACCAAACCGCCTGCTGGGCCGACTTCGGAA
CAGGGAGATGCTGCCGTTGAGCCGATGTCGATATCGCAAGAGGAAAATTT
CGGTACGCTGGACGGATCCGTTGAAGAAGGCACCGAGGAACCCATGTCTC
AAGAGCAAACTCTCGGCGGGCTTGGTGAAGACGTGACCATCGAAGAAGGC
ACCGAGGAACCCATGTCCCAAGAGCAAACTGTCGGCGGGCTTGGTGAAGA
CGTGACCCCCGCTCATGGAGGCGACTCGATGCCCCAAGCGGTGTCAGAAG
GACCTGGAGAGGACACACCCTCCAAGACGGCGCAAGACGGCGAGCGACAT
GTGCCGGACCGGAAACGACCGGCACCTGACGGGAAAGCACTAAACAGCAG
TCAAGTAATGGAAACGGAAGAACCTCACAAAGAAGCAGCTCAGGAAGCGG
GGAAAGGGCAGGCTGAGGGAGTCGAGACTGTATCCTGCGCGCGTGACTCG
TCTCCGCCGACCGAGAAACGATGA
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