prot_Ecto-sp13_S_contig6658.17528.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6658.17528.1
Unique Nameprot_Ecto-sp13_S_contig6658.17528.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length790
Homology
BLAST of mRNA_Ecto-sp13_S_contig6658.17528.1 vs. uniprot
Match: A0A6H5LB44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB44_9PHAE)

HSP 1 Score: 570 bits (1469), Expect = 5.530e-188
Identity = 543/794 (68.39%), Postives = 565/794 (71.16%), Query Frame = 0
Query:    1 MSLKAKGARGKHGXXXXXXXXXXXEGKKDSSAKRCKKCTALLPMMYKMKDKLAELHPQCNQYKLELDALRAENQELR--RQLAMPPSARTPPGRTAPPTWSTNSSVSPVRQRALGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSRPDAVSEKRKTPAPSSGGTQGTGLTASLGLGRGTADSXXXXXXXXXVSSPAGST--AAMTAPARKDRSKGEKVRDWTAAVARRKRETXXXXXXXXXXXXXXXXXXXXXXXXXCGSGRTGNVGGRWGGLEKGGEDSVEXXXXXXXXXXXXXXXXXXXXTALEKPSXXXXXXXXXXXXXXXXXXXXXXXXXXXVQPTGVFAAAAFSFLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPVPQTSSMLARGFRPGGESATSNEDGVEKEGGSEGDFDDGWEEGEGQQEEEEVEWYEDTLGDMGRLGWSQVWRRGDATAAXXXXXXXXXXGDGLDKGSRALARKCRKLLLADTAGSSPSLESGDEILGPKGLSALLRLELTGAVSMEGVLVSALMGRSLKRDHGFLGRLALQLLSGIDAAHASPPSHPEVLSLVVEELEGLAEIVAAPSTTAHLRGYGWARETRLALELLSETLLDWMDENQAKRSSGVGEAENGDEEDDDPGGYSSMSFGNSKXXXXXXXXXXXXXXXXXAGSLTGKGGVGEEGGGDAWRAEAEATVLWWWETDEEARIPWAVARLLGLLLRRLDQPQR 790
            MS KAK ARGKHGXXXXXXXXXXX       AKRCKKCTALLPMMYKMKDKLAELHPQCNQYK   + +    + +   R+   P SAR  P       W+ N ++  V +      A                                        V +R + VS+KRK  APSSG      LTASLGLG   A S   XXXXXX          AA+TAPARKDRSKGEKVRDWTAAVAR+KRE                  XXXXXXXX               LEKG      XXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXX        VQPTGVFAAAAFSFLDE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SGPVPQTSSMLARGFRPGGESA SNEDGVE+EGG EGDFDDGWEEGEGQQEEEEVEWYEDT GDMGRLGWSQ                                  CRKLLLADTAGS+PSLESGDEILGPKGLSALLRLELTGAVSMEGVLVSAL GRSLKRDHGFLGRLALQLLSGIDAAHASP S PEVLSLVVEELEGLAEI+AAPSTTA LRGYGWARETRLALELLSETLL WMDE+QAKR SGVG+ ENGD+E+DDPGGYSSMSFGNSK XXXXXXXXXXXXXXXX       GGVGEE GGDAWRAEAEATVLWWWETDEEAR+PWAVARLLGLLLRRLDQ QR
Sbjct:    1 MSSKAKRARGKHGXXXXXXXXXXXXXX-XXXAKRCKKCTALLPMMYKMKDKLAELHPQCNQYKGCCEDIPTLVKVIAQSREPGAPASARDAP-LCKNAAWA-NRTLHGVDEFVCACRAGAPSKKGSKGAAV---------------------------VAARSEVVSDKRKALAPSSGXXXXAALTASLGLGSDAAGSGSGXXXXXXXXXXXXXXXXAAVTAPARKDRSKGEKVRDWTAAVARQKRERGGRGDVDENGKGAAGRGXXXXXXXXXXXXXXXXXXXXXXXLEKG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAEAPAVVQPTGVFAAAAFSFLDEGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SGPVPQTSSMLARGFRPGGESAASNEDGVEEEGGGEGDFDDGWEEGEGQQEEEEVEWYEDTPGDMGRLGWSQ----------------------------------CRKLLLADTAGSAPSLESGDEILGPKGLSALLRLELTGAVSMEGVLVSALRGRSLKRDHGFLGRLALQLLSGIDAAHASPLSDPEVLSLVVEELEGLAEILAAPSTTAQLRGYGWARETRLALELLSETLLGWMDEHQAKRYSGVGDTENGDDENDDPGGYSSMSFGNSKKXXXXXXXXXXXXXXXXXXXXXXXGGVGEEEGGDAWRAEAEATVLWWWETDEEARVPWAVARLLGLLLRRLDQLQR 723          
BLAST of mRNA_Ecto-sp13_S_contig6658.17528.1 vs. uniprot
Match: D8LCR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR1_ECTSI)

HSP 1 Score: 503 bits (1294), Expect = 4.580e-160
Identity = 300/343 (87.46%), Postives = 306/343 (89.21%), Query Frame = 0
Query:  448 MLARGFRPGGESATSNEDGVEKEGGSEGDFDDGWEEGEGQQEEEEVEWYEDTLGDMGRLGWSQVWRRGDATAAXXXXXXXXXXGDGLDKGSRALARKCRKLLLADTAGSSPSLESGDEILGPKGLSALLRLELTGAVSMEGVLVSALMGRSLKRDHGFLGRLALQLLSGIDAAHASPPSHPEVLSLVVEELEGLAEIVAAPSTTAHLRGYGWARETRLALELLSETLLDWMDENQAKRSSGVGEAENGDEEDDDPGGYSSMSFGNSKXXXXXXXXXXXXXXXXXAGSLTGKGGVGEEGGGDAWRAEAEATVLWWWETDEEARIPWAVARLLGLLLRRLDQPQR 790
            MLARGFRPGGESA SNEDGVE E G EGDFDDGWEEGEGQQEEEEVEWYEDT GDMGRLGWSQVWRRGD TAA XXXXXXXXX  GLDKGSR LARKCRKLLLADTAGS+PS ESGDEILGPKGLSALLRLELTGAVSMEGVLVSAL GRSLKRDHGFLGRLALQLLSGIDAAHASP S PEVLSLVVEELEGLAEI+AAPSTT  LR +GWARETRLALELLSETLLDWMDENQAKRSSGVG+A NGDEE+DDPGGYSSMSFG   XXXXXXXXXXXXXXXXX                DAWRAEAEATVLWWWETDEEAR+PWAVARLLGLLLRRLDQPQR
Sbjct:    1 MLARGFRPGGESAASNEDGVEGEVGGEGDFDDGWEEGEGQQEEEEVEWYEDTPGDMGRLGWSQVWRRGDVTAAAXXXXXXXXXXXGLDKGSRVLARKCRKLLLADTAGSAPSSESGDEILGPKGLSALLRLELTGAVSMEGVLVSALRGRSLKRDHGFLGRLALQLLSGIDAAHASPLSDPEVLSLVVEELEGLAEILAAPSTTEQLRVFGWARETRLALELLSETLLDWMDENQAKRSSGVGDAVNGDEENDDPGGYSSMSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAWRAEAEATVLWWWETDEEARVPWAVARLLGLLLRRLDQPQR 343          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6658.17528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LB44_9PHAE5.530e-18868.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCR1_ECTSI4.580e-16087.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 290..310
NoneNo IPR availableCOILSCoilCoilcoord: 59..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6658contigEcto-sp13_S_contig6658:2923..8077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6658.17528.1mRNA_Ecto-sp13_S_contig6658.17528.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6658 2923..8077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6658.17528.1 ID=prot_Ecto-sp13_S_contig6658.17528.1|Name=mRNA_Ecto-sp13_S_contig6658.17528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=790bp
MSLKAKGARGKHGGGGGGGGGGKSEGKKDSSAKRCKKCTALLPMMYKMKD
KLAELHPQCNQYKLELDALRAENQELRRQLAMPPSARTPPGRTAPPTWST
NSSVSPVRQRALGSSATTTTAARGGGGGGGGGGGGGRAATAAAGAPSKKG
SNGAAVVVSRPDAVSEKRKTPAPSSGGTQGTGLTASLGLGRGTADSGGGN
GGGGGVSSPAGSTAAMTAPARKDRSKGEKVRDWTAAVARRKRETGGGGDV
DENGKGAAGGGGGGGGSGGCGSGRTGNVGGRWGGLEKGGEDSVEEKEDEE
EEDKAEEAAEESGETALEKPSSSSGGGDRKKSKGKKKKRGEAAGAPAAVQ
PTGVFAAAAFSFLDEGSKEKGGGETTSSDDDDDDDDDDDDDSTSNDSDGS
TNGRRQNQPRKRARTANGGAAAAAAGGGGSGDGGRRRRSGPVPQTSSMLA
RGFRPGGESATSNEDGVEKEGGSEGDFDDGWEEGEGQQEEEEVEWYEDTL
GDMGRLGWSQVWRRGDATAAAAGGGEGDDDGDGLDKGSRALARKCRKLLL
ADTAGSSPSLESGDEILGPKGLSALLRLELTGAVSMEGVLVSALMGRSLK
RDHGFLGRLALQLLSGIDAAHASPPSHPEVLSLVVEELEGLAEIVAAPST
TAHLRGYGWARETRLALELLSETLLDWMDENQAKRSSGVGEAENGDEEDD
DPGGYSSMSFGNSKKKKKKKAKDKGFGAGASAGSLTGKGGVGEEGGGDAW
RAEAEATVLWWWETDEEARIPWAVARLLGLLLRRLDQPQR
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