prot_Ecto-sp13_S_contig12053.1752.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12053.1752.1
Unique Nameprot_Ecto-sp13_S_contig12053.1752.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length352
Homology
BLAST of mRNA_Ecto-sp13_S_contig12053.1752.1 vs. uniprot
Match: A0A6H5JR78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR78_9PHAE)

HSP 1 Score: 526 bits (1354), Expect = 4.100e-170
Identity = 298/384 (77.60%), Postives = 314/384 (81.77%), Query Frame = 0
Query:    6 NSTVSGRNSPLRETTNVGPARFTEEEEGPPLGMHTTLEEVPSPPDHPGGKQLMLYQPLPFGMTVQDTAGADGGESGDGGS-------------------------------------ARAVVSDAMGTSAWVPEGPPWHIAVADSDDGAEDELHPLPEPLHAESVTLETALDSAPPGDNGLSSAREVSPALVPWGDRRITQPHPAVVGVVSAIIAGAVILLLCQWRARRTRRRQQALDLARQEALRRVILRDAGRSRQREVSDFWRWRLATAAGVVTGLRAQQERATAEHEAARAADREAAQERQEAAVGVVTAVETRRRESAETALDEAREAAAADRAEQEAIIHSTEGSLVETQRELRETRQGVMESRGVVEELQHQLKNIE 352
            N TVSGR+SPL E+ NV PA FTE+EEGPP GMH+T +E+PSPPDHPGGKQL+LYQPLPFGM VQDT GADGGES +GGS                                     ARAVVSDAMGTS WV EGPP HIAV DSDDGAEDE HPL +P H ESVTLET LDSA P DNGLSSAREVSPALV WGDRRITQPHPAVVGVVSAIIAGAV+LLL QWRARRTR R+QAL LARQ+ALRRVILRDAGRSRQREVSDFWRWRLATA GVV  LR Q ERA AEHEAARAADREAAQERQEAAVGVVTA+ETRRRESAETALDEAREAAAADRAEQEA++HSTEGSLVETQRELRETRQGV ES+GVVEELQ QLKNIE
Sbjct:  106 NGTVSGRDSPLPESANVDPAAFTEDEEGPPFGMHSTPKEIPSPPDHPGGKQLVLYQPLPFGMIVQDTEGADGGESRNGGSRNPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAVVSDAMGTSNWVLEGPPSHIAVVDSDDGAEDEQHPLTKPPHVESVTLETVLDSAQPDDNGLSSAREVSPALVRWGDRRITQPHPAVVGVVSAIIAGAVVLLLRQWRARRTRLRRQALGLARQDALRRVILRDAGRSRQREVSDFWRWRLATATGVVADLRVQHERAAAEHEAARAADREAAQERQEAAVGVVTAMETRRRESAETALDEAREAAAADRAEQEALVHSTEGSLVETQRELRETRQGVTESQGVVEELQQQLKNIE 489          
BLAST of mRNA_Ecto-sp13_S_contig12053.1752.1 vs. uniprot
Match: D7FTQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ8_ECTSI)

HSP 1 Score: 443 bits (1139), Expect = 1.240e-140
Identity = 258/381 (67.72%), Postives = 273/381 (71.65%), Query Frame = 0
Query:    5 PNSTVSGRNSPLRETTNVGPARFTEEEEGPPLGMHTTLEEVPSPPDHPGGKQLMLYQPLPFGMTVQDTAGADGGESGDGGS--------------------------------------------------------------------------ARAVVSDAMGTSAWVPEGPPWHIAVADSDDGAEDELHPLPEPLHAESVTLETALDSAPPGDNGLSSAREVSPALVPWGDRRITQPHPAVVGVVSAIIAGAVILLLCQWRARRTRRRQQALDLARQEALRRVILRDAGRSRQREVSDFWRWRLATAAGVVTGLRAQQERATAEHEAARAADREAAQERQEAAVGVVTAVETRRRESAETALDEAREAAAADRAEQEA 311
            PNSTVSGR+SPLRET NVGPA FTEEEEGPP GMHTT EE+PSPPDHPGGK+L+LYQPLPF M V DT GADGGESGDGGS                                                                           RAVVSDAMGTSAWVPEGPP H AV +SDDGAED+LHP PEPLHAE VTLET LDSA P DNGLSSAREVSPALV W  RRI QPHPAVVGVVSAI AGAV+LLLCQWR+RRTR RQQAL L RQ+ALRRVIL+DA RSRQREVS FWRWRLA++ G+V  LRAQ ERA AE+EAARA DREAAQ RQEAAVG+VTAVETRRRESAETALDEAREAAAADRAEQEA
Sbjct:   83 PNSTVSGRDSPLRETANVGPAAFTEEEEGPPFGMHTTPEEIPSPPDHPGGKELVLYQPLPFVMIVPDTEGADGGESGDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAVVSDAMGTSAWVPEGPPSHTAVVNSDDGAEDKLHPHPEPLHAEPVTLETVLDSAQPDDNGLSSAREVSPALVRWDGRRIAQPHPAVVGVVSAIFAGAVVLLLCQWRSRRTRLRQQALGLPRQDALRRVILKDADRSRQREVSVFWRWRLASSTGIVADLRAQGERAAAENEAARAIDREAAQGRQEAAVGMVTAVETRRRESAETALDEAREAAAADRAEQEA 463          
BLAST of mRNA_Ecto-sp13_S_contig12053.1752.1 vs. uniprot
Match: D7FSR8_ECTSI (Similar to deubiquitinating enzyme 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR8_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 1.750e-118
Identity = 244/416 (58.65%), Postives = 256/416 (61.54%), Query Frame = 0
Query:    4 QPNSTVSGRNSPLRETTNVGPARFTEEEEGPPLGMHTTLEEVPSPPDHPGGKQLMLYQPLPFGMTVQDTAGADGGESGDGG---------------------------------------------------------------------------------------------------------------SARAVVSDAMGTSAWVPEGPPWHIAVADSDDGAEDELHPLPEPLHAESVTLETALDSAPPGDNGLSSAREVSPALVPWGDRRITQPHPAVVGVVSAIIAGAVILLLCQWRARRTRRRQQALDLARQEALRRVILRDAGRSRQREVSDFWRWRLATAAGVVTGLRAQQERATAEHEAARAADREAAQERQEAAVGVVTAVETRRRESAETALDEAREAAAADRAE 308
            +PNSTVSGR+SP RET NVGPA FTE EE PP GMHTT E+ P PPDHPGGK+L+LYQPLPF +  Q TAGADGGES +GG                                                                                                               SARAVVSDA+GTSAWVPEGPP HIA  DS+DGA DELHPLPEPLHAESVTLET LDSA   DNGL SAREVSPALV WGDRRITQ H AVVGVV AI AGAV+L LCQWR+RRTR RQQAL LARQ ALRRVILRDA R RQREVS FWR RLATA GVVTGLRAQ ERA AEHEA RA DRE AQE+QEAAV  VTAVET RRE AETALDE  EAAAADR E
Sbjct:    3 KPNSTVSGRDSP-RETANVGPAVFTEGEEAPPFGMHTTPEDRPLPPDHPGGKELVLYQPLPFAVDCQCTAGADGGESREGGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARAVVSDAIGTSAWVPEGPPSHIAGVDSEDGAGDELHPLPEPLHAESVTLETVLDSAQSDDNGLLSAREVSPALVRWGDRRITQKHLAVVGVVPAISAGAVVLFLCQWRSRRTRLRQQALGLARQGALRRVILRDAVRLRQREVSSFWRLRLATATGVVTGLRAQGERAAAEHEATRATDREDAQEQQEAAVAEVTAVETARRELAETALDEKCEAAAADRVE 417          
BLAST of mRNA_Ecto-sp13_S_contig12053.1752.1 vs. uniprot
Match: A0A6H5KS24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS24_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.260e-63
Identity = 196/511 (38.36%), Postives = 207/511 (40.51%), Query Frame = 0
Query:   94 MGTSAWVPEGPPWHIAVADSDDGAEDELHPLPEPLHAESVTLETALDSAPPGDNGLSSAREVSPA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVPWGDRRITQPHPAVVGVVSAIIAGAVILLLCQWRARRTRRRQQA-----------LDLARQ-----------------------------------------------------EALRRVILRDAGRSRQREVSDFWRWRLATAAGVVTGLRAQQERATAEHEAARAADREAAQERQEAAVGVVTAVETRRRESAETALDEAREAAAADRAEQEAIIHSTEGSLVETQRELRETRQGVMESRGVVEELQHQLKNIE 352
            MGTSAWVPEGPP HIAV DSDDGA DEL+PLPEPLHAESVTLET LDSA    NGLSSAREVSPA                                                                                                                                                                                            LV WGDRRITQ H AVVGVV AI AGAV+LLLCQWR+  TR RQQA            D +RQ                                                     EALRRVI+RDA RSRQREVS FWRWRLATA GVVTGLRAQ ERA  EHE  RAADREAAQER+EAAVGVVTAVET RRE  ET LDE REAAAADRAEQ+A +   E  +  T+           ESRGV+EELQ QLK IE
Sbjct:    1 MGTSAWVPEGPPSHIAVGDSDDGAGDELYPLPEPLHAESVTLETVLDSAQSNGNGLSSAREVSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVCWGDRRITQQHLAVVGVVPAIFAGAVVLLLCQWRSWPTRLRQQAPEALRRVIIRDADRSRQREVSAFWRWRLATATGVVTGLRAQYERAAPEHETDRAADREAAQERREAAVGVEALRRVIIRDADRSRQREVSAFWRWRLATATGVVTGLRAQYERAAPEHETDRAADREAAQERREAAVGVVTAVETARREMGETTLDETREAAAADRAEQQARMEELEAQIHSTE-----------ESRGVLEELQQQLKKIE 500          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12053.1752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JR78_9PHAE4.100e-17077.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ8_ECTSI1.240e-14067.72Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FSR8_ECTSI1.750e-11858.65Similar to deubiquitinating enzyme 3 n=1 Tax=Ectoc... [more]
A0A6H5KS24_9PHAE1.260e-6338.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 288..308
NoneNo IPR availableCOILSCoilCoilcoord: 334..352
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..352
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..191
NoneNo IPR availableTMHMMTMhelixcoord: 171..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12053contigEcto-sp13_S_contig12053:2658..4003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12053.1752.1mRNA_Ecto-sp13_S_contig12053.1752.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12053 2531..4003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12053.1752.1 ID=prot_Ecto-sp13_S_contig12053.1752.1|Name=mRNA_Ecto-sp13_S_contig12053.1752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp
MCSQPNSTVSGRNSPLRETTNVGPARFTEEEEGPPLGMHTTLEEVPSPPD
HPGGKQLMLYQPLPFGMTVQDTAGADGGESGDGGSARAVVSDAMGTSAWV
PEGPPWHIAVADSDDGAEDELHPLPEPLHAESVTLETALDSAPPGDNGLS
SAREVSPALVPWGDRRITQPHPAVVGVVSAIIAGAVILLLCQWRARRTRR
RQQALDLARQEALRRVILRDAGRSRQREVSDFWRWRLATAAGVVTGLRAQ
QERATAEHEAARAADREAAQERQEAAVGVVTAVETRRRESAETALDEARE
AAAADRAEQEAIIHSTEGSLVETQRELRETRQGVMESRGVVEELQHQLKN
IE
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