prot_Ecto-sp13_S_contig66569.17523.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66569.17523.1
Unique Nameprot_Ecto-sp13_S_contig66569.17523.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length39
Homology
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BLAST of mRNA_Ecto-sp13_S_contig66569.17523.1 vs. uniprot
Match: D7FK96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK96_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 5.590e-18
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:    1 QANGKGNEFRKAATSSGLKLLAFFAAVRVAHYAMNRPR 38
            QANGKGNEFRKAATSSGLKLLAFFAAVRVAHYAMNRPR
Sbjct:    9 QANGKGNEFRKAATSSGLKLLAFFAAVRVAHYAMNRPR 46
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66569.17523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK96_ECTSI5.590e-18100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66569contigEcto-sp13_S_contig66569:173..289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66569.17523.1mRNA_Ecto-sp13_S_contig66569.17523.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66569 173..289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66569.17523.1 ID=prot_Ecto-sp13_S_contig66569.17523.1|Name=mRNA_Ecto-sp13_S_contig66569.17523.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=39bp
QANGKGNEFRKAATSSGLKLLAFFAAVRVAHYAMNRPR*
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