prot_Ecto-sp13_S_contig66565.17522.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig66565.17522.1
Unique Nameprot_Ecto-sp13_S_contig66565.17522.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp13_S_contig66565.17522.1 vs. uniprot
Match: A0A6H5KJ38_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ38_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 8.140e-41
Identity = 76/83 (91.57%), Postives = 78/83 (93.98%), Query Frame = 0 
Query:    1 AGQRAGAPTLAVPATGAAVGTTTSALLFSALRVVLEDRVGGRGWLGSVRELQSVCFDTCKECRKVVPVRLRVSDSTPGHLWKK 83
            AGQR  APTLAV ATGAAV TTTSALLFSALR+VLEDRVGGRGWLGSVRELQSVCFD CKECRKVVPVRLRVSDSTPGHLW+K
Sbjct:   54 AGQRTRAPTLAVRATGAAVRTTTSALLFSALRMVLEDRVGGRGWLGSVRELQSVCFDACKECRKVVPVRLRVSDSTPGHLWRK 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig66565.17522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ38_9PHAE8.140e-4191.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig66565contigEcto-sp13_S_contig66565:408..659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig66565.17522.1mRNA_Ecto-sp13_S_contig66565.17522.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig66565 408..661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig66565.17522.1 ID=prot_Ecto-sp13_S_contig66565.17522.1|Name=mRNA_Ecto-sp13_S_contig66565.17522.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
AGQRAGAPTLAVPATGAAVGTTTSALLFSALRVVLEDRVGGRGWLGSVRE
LQSVCFDTCKECRKVVPVRLRVSDSTPGHLWKKG
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