mRNA_Ecto-sp13_S_contig6656.17521.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: D8LPM1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM1_ECTSI) HSP 1 Score: 1290 bits (3339), Expect = 0.000e+0 Identity = 815/1161 (70.20%), Postives = 887/1161 (76.40%), Query Frame = 1
Query: 1 IYHARNQTLEQIEAPRPLEEHLLIYHPRRVRFEALVAQKSMSAPLVDPCGPGDVIWAVQYLAELLEMNFKELVDDFEAHVTDDGEEVDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAPRGTVSEGKAKPRLGDWSDDQCPYWERKRVEVEDVDDYDAPRSYAFDTGNPYGVLEIDEEDDPDEHVDEEGGPYYPQEHDDPRRRVXXXDDPPENVQDEPQEHMRDEVDFKEHDDPDEHASAENGPR----------DDPHVDEKDNWMPRVRVTKPRSWRRTGRRQLKHKNRXXXXXXXXXXXXXXXXXXGAGGLRRRAPIRGGANPGERQPKRSTAG--QAPAAADEKKD--THTLNDEAWFMREDLINWSRFKPAERDERRNGGWLKVLASKAREQEMVRKQESRDKHKAIKGAQCSECKEKTDTEDNPILICEDCVSKGVPRLSALHHHCTKPRLDAVP--DGNWFCDECRKKRGEVVPVQSTGVDGSGPTQQQQQPTGVGGPMESTXXXXXXXXXXXXXXXXXXXXXXX----ERAPVATVAKISTATKRIGRTASKGKAEAXXXXXXXTVRKVRKRRVRKPARVVAKEYARILEDFLNSDEMAKFVEATRTKAAEKAKHFENTCPRAGKEPLHANTSIPLIAKLLARGVCDDHLDGIEILDGVFFKHAALDALERYFNWEYVFDPESIGVILGKTKVSIDGEEFVVESFDCGEYILSDGSVMQQRGVLENRTDGGVTLKAEQRRFIIHLVTTCVNMMAHVVPAVIEECTPSMVKDMMWNPVEARKRETNEERREELDQIINRVNTLRDLTLRIFTGAAVKDTLPASFWDVEGNAELREFAEEAVSLKKINFLDRLECVRNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWHAKLRSIIVQLTCVYRLGRSGNLLEAYYALSEAEIEVVMKGHRSHWSLNLDYGLPDLDRLASAQTTATDADLQGESSHALRLAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKFFSHARFGKKLVPPLMGNASCREPAKQAIKASGKLFDVARNGRAKATAEKGGGVGTAAKVRQQRVVLLDLTPEEREKVMDMFMAAIAKNSCGRLMDAIRKHDPGLVEWGKERLAKAELKSSCIRAGTTLLKSP 3423
++ A N E++ APRPL EHLL++HP+RV FEALV +KSMS PLVDPCGPGDVIWAV+YL ELL+MNF+ LV D E DG XXXXXXXXX XXXXXXXXXXXXXX +A +SEGKAK RLGDWSD+QC +WE+ +++ +D+DD D PRSYA+DTGN Y VLE+D ED D+HVD G PQEHD PR V X P EHASAE D P+V E+D W+PRVRVTKPRSWRRTGRRQLKH+NRXXXXXXXXXXXXXXXXXX AGGLRRRAPIRGGA+PG+ Q +R++A +AP DE +D + D+AWF + + W ER + + G +V A KA ++ K A C EC + T DNPIL+C+ CV ALH CTK L+A+P + WFCD CR+KRGE PVQ T DG G TQ Q XXXXXXXXXXXXXXXXXXXXXXX ERAPV+TVA TATKR R ASKGKA+AXXXXXXX VRKRRVRKPARVVAKEYARILED LNSDEM FVEA+R KAAEKAKHFENTCPR EP + TSIPLIAKLL RG+CDD LDGIEILDGVFFK AALDALERYFNWEYVFDPESIGV LG TKV ID EEFVVESFDCGEY LSDGSVMQQ GVLENRTDGGVTL+ EQRRFIIHLVTT VNMMAHVVP VIEE TPSMVKDMMWNPVEA KRETN+ERREELDQIINRVNTLRDLTLRIFTGAAVKDTLPASFWDVEGN ELREFAEEA SLKKINFL RLECV NREVVAGKLFTGEIVTGGYSEAPKPDRVSGAW AKLRSIIVQLTC YRLGRS NLLEAYYALSEAEIE+VMKGHRSHW +NLDYGLP LDRL AQTTATDADLQGE+SHALR AVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSK+FSHAR GKKLVPPLMGNASCREPAKQA++ASGKLFDVARNGRAKATAEK G VG AAKVR+QRV+LL+LTPEEREK MDMFMAAI KN CGRLMDAI+KHDPG VEWGKE LAKA+LKSS + L++P
Sbjct: 124 LFDAINAPEEELGAPRPLGEHLLLHHPQRVHFEALVPKKSMSEPLVDPCGPGDVIWAVRYLTELLKMNFEALVGDAEK---------DGXXXXXXXXXXGVETPPGAVTEALPXXXXXXXXXXXXXXXDASPEMISEGKAKLRLGDWSDEQCTHWEQIKMDFDDMDDTDEPRSYAYDTGNMYDVLEMDGED-ADDHVD---GEDDPQEHDQPRGSVDEXXXXXXXXXXXXXXXXXXXXXX-----PREHASAEXXXXXXXXXXXXXXDAPYVVEEDEWVPRVRVTKPRSWRRTGRRQLKHQNRXXXXXXXXXXXXXXXXXX-AGGLRRRAPIRGGADPGDGQVRRTSARDRRAPRKPDEPEDLSSKARYDDAWFEKREK-EWLDLPEPERTTQLDWGKGQVEAWKAGKE---------------KKAACMECSKGTWYSDNPILLCDGCVR------GALHLRCTKFPLEAIPGEEDEWFCDACREKRGETPPVQPTVADGPGSTQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERAPVSTVANPITATKRKPRAASKGKAKAXXXXXXXXAGNVRKRRVRKPARVVAKEYARILEDVLNSDEMGTFVEASRAKAAEKAKHFENTCPRTPNEPPSSITSIPLIAKLLTRGLCDDPLDGIEILDGVFFKRAALDALERYFNWEYVFDPESIGVFLGTTKVGIDDEEFVVESFDCGEYSLSDGSVMQQWGVLENRTDGGVTLEDEQRRFIIHLVTTYVNMMAHVVPVVIEESTPSMVKDMMWNPVEAGKRETNKERREELDQIINRVNTLRDLTLRIFTGAAVKDTLPASFWDVEGNEELREFAEEAGSLKKINFLGRLECVHNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWPAKLRSIIVQLTCAYRLGRSNNLLEAYYALSEAEIELVMKGHRSHWGVNLDYGLPHLDRLTWAQTTATDADLQGENSHALRFAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKYFSHARIGKKLVPPLMGNASCREPAKQAVEASGKLFDVARNGRAKATAEKSGAVGPAAKVRKQRVILLELTPEEREKAMDMFMAAITKNGCGRLMDAIKKHDPGFVEWGKECLAKADLKSSVYTSRDNYLETP 1243
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5J7T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7T3_9PHAE) HSP 1 Score: 336 bits (862), Expect = 1.480e-97 Identity = 271/649 (41.76%), Postives = 313/649 (48.23%), Query Frame = 1
Query: 1447 VDGSGPTQQQQQPTGVGGPMESTXXXXXXXXXXXXXXXXXXXXXXX--ERAPVATVAKISTATKRIGRTASKGKAEAXXXXXXXTVRKVRKRRVRKPARVVAKEYARILEDFLNSDEMAKFVEATRTKAAEKAKHFENTCPRAGKEPLHANTSIPLIAKLLARGVCDDHLDGIEILDGVFFKHAALDALERYFNWEYVFDPESIGVILGKTKVSIDGEEFVVESFDCGEYILSDGSVMQQRGVLENRTDGGVTLKAEQRRFIIHLVTTCVNMMAHVVPAVIEECTPSMVKDMMWNPVEARKRETNEERREELDQIINRVNTLRDLTLRIFTGAAVKDTLPASFWDVEGNAELREFAEEAVSLKKINFLDRLECVRNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWHAKLRSIIVQLTCVYRLGRSGNLLEAYYALSEAEIEVVMKGHRSHWSLNLDYGLPDLDRLASAQTTATDADLQGESSHALRLAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKFFSHARFGKKLVPPLMGNASCREPAKQAIKASGKLFDVARNGRAKATAEKGGGVGTAAKVRQQRVVLLDLTPEEREKVMDMFMAAIAKNSCGRLMDAIRKHDPGLVEWGKERLAKAELKSS 3387
VDG G TQ QQQ V GPMEST XXXXXXXXXXXXXXXXXX ERAP+ TVA + T T+ GR A+K +V KRRVR P RVVAKE ARILE L DE+ F+E ++ KA EKA+ E TC RAGKEP HA TSIPLIAKLL G+CDD +M Q G+LE RTDG VTL+AEQRRF+IHLVTT VNM+ HVVPA R +R+EELDQIINRVNTLRDL LR+FT AAVKDTLPA FW+V GN +LREFAEE SL++INFLDRLEC N E+ +GK FTGE+VT V+VVGCGI DA K+G LQRDSLDS +FSHAR + P LMGNA P + +AS K R+ RV+++D TPEEREK +D MAAIAKN CGRLMD ++KHDPG VEWGKE LAKA++ S+
Sbjct: 41 VDGPGSTQSQQQLMNVDGPMESTQQQQQXXXXXXXXXXXXXXXXXXPTERAPMWTVANVGTTTESKGRDATK---------------RVHKRRVRWPTRVVAKENARILEACLGDDELTDFMERSKAKADEKAEEIEGTCSRAGKEPPHAITSIPLIAKLLTPGLCDDP------------------------------------------------------------------GIMHQWGLLEKRTDGVVTLEAEQRRFVIHLVTTYVNMITHVVPA--------------------RLANMRGKRKEELDQIINRVNTLRDLMLRVFTDAAVKDTLPAIFWEVYGNKDLREFAEETGSLREINFLDRLECAHNTEL-SGKSFTGEVVTR---------------------------------------------------------------------------------------------------------------VSVVGCGILDAAKHGILQRDSLDSNYFSHARLARS--PSLMGNA----PFSKLTRAS-------------------------VKERRLRVIVVDQTPEEREKSIDTCMAAIAKNGCGRLMDTVKKHDPGFVEWGKEHLAKAKINST 445
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5K2A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A3_9PHAE) HSP 1 Score: 257 bits (656), Expect = 2.540e-66 Identity = 193/493 (39.15%), Postives = 261/493 (52.94%), Query Frame = 3
Query: 3438 EDHLLGNTLEEIKHGQQRVASLMTKLEAEDGFTCKDISVFSVALALACLFAGACLRPQDFFRMVASQMYYDTKQEKIKIRLLDGKQSEKAERKTSRVCMYHELEGAEIVDWWVVMALVGRPFLKKYNEGFLDKSFGPLGTDGEVLTEYVFGVVLESIGKAFFSTGNADVNALRTVQESLAAEHMVELGIPKDFIIKHELSKQMRTSKRGRMAALD--------DAYDLRTADPVHVVRRNCNTEKYCCKGGIRPMLMARRLALEGGSETFSSVGDTELSSGGGDLDSEVDTVMTKVEREIEL---ELQVKRLR-ELKAKNAAASGGATLAKVAPFVPSPTGAAYAAAATVDEKPKKVKRGQIPGQKVKYETKVSAYPITPEE--RDGLRELVEAIRGSWQRAKERQSAKKKGDKVDPVCHDMSLPGRRNAMLPMVWELKKRDAGQYEGKFEPGGWFAGL--PCSRPNSYRLTFQ*LVGLADTQVEGLQWLSWQ 4868
E+HLLG T EE+ G++ V L+ LE EDG +D VFSVA LA LF GA LRPQDFF + +E AE S VCM H +EGAE+V W VMALVGRPFLKK N G LD FGPLG DG+ L++ VFG +LE G AFF N DVNALRT Q +LA E++++LG D + EL+K+ +K + L D Y+ R +DPV ++ C + KGGIR ML RR L GGS+T S + T D ++D +VE+E++L EL++ R+ EL+ + + A A A A GAA A+ A V ++PK+ +R Y+ K P T +E R+G++ +V+AI ++QRAK R DK D V H M+LP + + +V L K DA +F PG W+ P ++ + + F LVGL QVE W SW+
Sbjct: 661 EEHLLGKTPEEVAEGEKSVVKLLQALE-EDGIDSEDFVVFSVATHLAMLFNGATLRPQDFFGL-----------------------TESAEESLSTVCMEHGVEGAELVRWLAVMALVGRPFLKKANGGELDTRFGPLGIDGKALSQGVFGTILEETGLAFFGLDNVDVNALRTAQVTLAVEYVIKLGFTLDAMCLDELAKETSGAKNVTLFPLTPHPPQNVTDIYNARRSDPVSATKK-CKEGEVSFKGGIRRMLDERRGRLSGGSDTPSDISST--------TDEDLDVHFIRVEKELKLRTKELELARVEDELRLRKSDAWFVAGPAVGAVPATGSYGAAPASGAAVSKQPKQGRR--------LYKKKT---PRTTDEAKREGVKAMVKAIGEAFQRAKVRTEV---NDKRDGVHHYMALPSNQASRFYLVRYLVKNDA-----EFAPGAWYVNSKHPTAKGS---IAFDELVGLVQDQVEDFHWSSWR 1098
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5L6S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S7_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.010e-56 Identity = 166/499 (33.27%), Postives = 234/499 (46.89%), Query Frame = 1
Query: 1927 RGVCDDHL-DGIEILDGVFFKHAALDALERYFNWEYVFDPESIGVILGKTKVSIDGEEFVVESFDCGEYILSDGSVMQQRGVLENRTDGGVTLKAEQRRFIIHLVTTCVNMMAHVVPAVIEECTPSMVKDMMWNPVEARKR----------ETNEERREELDQIINRVNTLRDLTLRIFTGAAVKDTLPASFWDVEGNAELREFAEEAVSLKKINFLDRLECVRNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWHAKLRSIIVQLTCVYRLGRSGNLLEAYYALSEAEIEVVMKGHRSHWSLNLDYGLPDLDRLASAQTTATDADLQGESSHALRLAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKFFSHARFGKKLVPPLMGNASCREPAKQAIKASGK-LFDVARNGRAKATAEKGGGVGTAAKVRQQRVVLLDLTPEEREKVMDMFMAAIAKNSCGRLMDAIRKHDPGLVEWGKERLAKAELKSS 3387
RG+CD + +++ D V FK + L L+ YF+ Y+F+P SI V++G T+V IDG FVVESFD G+Y L+ + Q +L+NR G TL E RRFII V MMA VP C + + M+WN EA +R E+N+ EEL + +R L+L IFT + +TLP +FW + LR+FAE + SL ++N L L C + + G LFT ++V GG+S AP DR G W KL+S+ LTC YRLGR +L+EAY LSE E + + H W NL + L L D++L GE S+ALR G ++ L+G S ++ + + F RN RA A+ GGV MFM A+ N C R+M+AI + DPG++++ ERL +AE S+
Sbjct: 189 RGLCDASAPNSLKLNDKVGFKRSELPGLKYYFDKNYMFNPASIEVVVGSTRVKIDGRIFVVESFDHGKYNLAGHKPITQWELLQNRRGEGATLDDELRRFIIQQADDYVVMMARAVPY-FHNCGIA-TEGMLWNIKEAVERARAHPDNIDVESNKMTLEELASLQEGHEKMRSLSLEIFTTLPLSETLPKNFWGGAVDGSLRDFAEGSGSLSQLNCLKGLGCASRKGMTEGCLFTEDVVGGGHSIAPSHDRPRGTWDEKLKSVSRLLTCAYRLGRPVSLVEAYIPLSEGECNI-LDAHHGQWKDNLAFSLKGLHVGLEESVDVNDSELTGEKSNALRA----------------------------------------------GPGILQKLLGTDSSTVAVERIVSVKVENFFQKVRNNRAHIEAKTSGGVR-------------------------MFMEALDVNGCRRIMEAIERIDPGIIDFLLERLGRAERAST 613
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: D8LJ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ27_ECTSI) HSP 1 Score: 195 bits (495), Expect = 1.720e-48 Identity = 108/206 (52.43%), Postives = 134/206 (65.05%), Query Frame = 3
Query: 3423 DDGRSEDHLLGNTLEEIKHGQQRVASLMTKLEAEDGFTCKDISVFSVALALACLFAGACLRPQDFFRMVASQMYYDTKQEKIKIRL-LDGKQSEKAERKTSRVCMYHELEGAEIVDWWVVMALVGRPFLKKYNEGFLDKSFGPLGTDGEVLTEYVFGVVLESIGKAFFSTGNADVNALRTVQESLAAEHMVELGIPKDFIIKHELS 4037
DD E+HLLG T E + G++ V +L+ L+ EDG KD +FSVA LA LF GA LRPQDFF +V Y+ ++ IRL +GKQ+E AE S VCM H +EGAE+V W VMALVGRPFLK N G LD FGPLG DG+ L++ VFG +LE G AFF N DVNALRT Q++LA EH++ELG D + EL+
Sbjct: 424 DDIGGEEHLLGKTSEGVAEGEKMVVTLLKALD-EDGVDSKDFVLFSVATHLAMLFNGATLRPQDFFGLVGKTTYFKPSVGRMMIRLPAEGKQTESAEESLSTVCMEHGIEGAEVVRWLAVMALVGRPFLKNANGGELDTRFGPLGIDGKALSQGVFGTILEETGLAFFGLDNVDVNALRTAQDTLAVEHVIELGFTLDAMCLDELA 628
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5JTS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS7_9PHAE) HSP 1 Score: 143 bits (360), Expect = 3.150e-32 Identity = 101/287 (35.19%), Postives = 128/287 (44.60%), Query Frame = 1
Query: 2515 AVSLKKIN-----FLDRLECVRNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWHAKLRSIIVQLTCVYRLGRSGNLLEAYYALSEAEIEVVMKGHRSHWSLNLDYGLPDLDRLASAQTTATDADLQGESSHALRLAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKFFSHARFGKKLVPPLMGNASCREPAKQAIKASGKLFDVARNGRAKATAEKGGGVGTAAKVRQQRVVLLDLTPEEREKVMDMFMAAIAKNSCGRLMDAIRKHDPGLVEWGKER 3360
A S K++N FL RLEC +NREV++G LFTGE+VT + +APK + GAWHAKLRS+IVQLTC YRLGRS N LEAYYALS E+E+++ H C+ VARNGRA AEK GG+G +AK R R+V TP+ RE+ MDMFMAAI +N CGRL+DAI+K+D + WG+ +
Sbjct: 7 ASSRKRLNGSKNDFLGRLECDKNREVLSGNLFTGEVVTEDFFDAPKHGKY-GAWHAKLRSVIVQLTCGYRLGRSANFLEAYYALSAVEVELLICHH-------------------------------------------------------------------------------------------------LHCK---------------VARNGRATRAAEKSGGIGASAKERPCRLVFFHQTPKGREETMDMFMAAITRNGCGRLVDAIKKYDADFI-WGQHK 179
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5L612_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L612_9PHAE) HSP 1 Score: 142 bits (357), Expect = 4.760e-30 Identity = 88/254 (34.65%), Postives = 138/254 (54.33%), Query Frame = 3
Query: 3438 EDHLLGNTLEEIKHGQQRVASLMTKLEAEDGFTCKDISVFSVALALACLFAGACLRPQDFFRMVASQMYYDTKQEKIKIRL-LDGKQSEKAERKTSRVCMYHELEGAEIVDWWVVMALVGRPFLKKYNEGFLDKSFGPLGTDGEVLTEYVFGVVLESIGKAFFSTGNADVNALRTVQESLAAEHMVELGIPKDFIIKHELSKQMRTSKRGRMAALDDAYDLRTADPVHVVRRNCNTEKYCCKGGIRPMLMARRL 4196
EDHLLG T E++ + +A ++ L+A DG+ + FSV L CLF ACLR + + A+ YY+ ++ ++ +R KQS+ A + S V HE+ GA++V W +VM VGR FL+++N G +D SFGPL ++G +T FG+ + + +A+F NAD+ ALRT Q+S A ++ G D EL+++ RT + AY D V + R + KGG+R M + +R+
Sbjct: 1064 EDHLLGRTPGEVEENKAWIAGVVNGLKA-DGWEPRHWCGFSVVTQLGCLFNAACLRERSALNLAANTAYYNNERGRVAMRPPAKEKQSKTANKNLSTVLREHEIHGADVVRWVMVMLFVGREFLRQHNGGVVDASFGPLNSNGTHMTPDTFGIFFKEVMRAYFGADNADIYALRTAQDSQAVRDLLIAGANTDHPALLELAREQRTGGNVSVVNPFGAYCTYQFDRVAALVRGIVHLDF--KGGLRRMSVEKRI 1314
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5L073_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L073_9PHAE) HSP 1 Score: 135 bits (341), Expect = 4.470e-28 Identity = 82/209 (39.23%), Postives = 125/209 (59.81%), Query Frame = 3
Query: 3438 EDHLLGNTLEEIKHGQQRVASLMTKLEAEDGFTCKDISVFSVALALACLFAGACLRPQDFFRMVASQMYYDTKQEKIKIRL-LDGKQSEKAERKTSRVCMYHELEGAEIVDWWVVMALVGRPFLKKYNEGFLDKSFGPLGTDGEVLTEYVFGVVLESIGKAFFSTGNADVNALRTVQESLAAEHMVELGIPKDFIIKHELSKQMRTSKR 4061
EDHLLGN+ E + VA +M L+ E F C+DI SV L +F A LR DFF + A+ MYY+ K+ + +R GKQ+E A + V HE+ G +++ W +VM LVGR FL+K G +D FGPL DG+ L++ VF V+ ++G+ +F NADV ++RTVQ+++A E +VE+G+ +L ++ RT+++
Sbjct: 1225 EDHLLGNSPE----AKSWVAKVMEGLD-ERRFECRDICRLSVYTQLGLMFNAAALRDGDFFHLSANTMYYNNKRGTLLMRPPAKGKQTESANGELKNVLKEHEIWGPDVIRWCMVMNLVGREFLRK-KIGSVDPEFGPLAPDGQRLSDDVFKKVVVAVGRTYFGVDNADVYSMRTVQDTIATEDLVEVGLDHTAHCAQDLFRRQRTTEK 1427
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 134 bits (338), Expect = 8.840e-28 Identity = 78/207 (37.68%), Postives = 122/207 (58.94%), Query Frame = 3
Query: 3438 EDHLLGNTLEEIKHGQQRVASLMTKLEAE-DGFTCKDISVFSVALALACLFAGACLRPQDFFRMVASQMYYDTKQEKIKIRL-LDGKQSEKAERKTSRVCMYHELEGAEIVDWWVVMALVGRPFLKKYNEGFLDKSFGPLGTDGEVLTEYVFGVVLESIGKAFFSTGNADVNALRTVQESLAAEHMVELGIPKDFIIKHELSKQMRT 4052
EDHLLG T +E K G+ +A ++ L+ + + + C+D FSV L CLF ACLR + + A YY+ Q +I +R GKQ A ++ V HE+ GA++V W +VM+LVGR FL++ N G +D+SFGPL ++G +T FG + + + +A+F NADV +LRT +S A + ++ +G D EL+++ +T
Sbjct: 238 EDHLLGRTPQEKKEGKAWIAGVVKGLKEDVEEWNCQDWCRFSVVTQLGCLFNAACLRQKPALNLSAKTAYYNNDQGRIAMRPPKKGKQHRTANKRLDTVLKEHEIHGADVVRWVMVMSLVGRAFLREDNNGVVDESFGPLNSNGTQITADTFGKIFK-VMRAYFGVDNADVYSLRTAHDSQAVKDLLAVGGNTDHPAMAELAREQQT 443
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Match: A0A6H5JK98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK98_9PHAE) HSP 1 Score: 106 bits (264), Expect = 3.400e-19 Identity = 131/496 (26.41%), Postives = 220/496 (44.35%), Query Frame = 1
Query: 1957 IEILDGVFFKHAALDALERYFNWEYVFDPESIGVILGKTKVSIDGEEFVVESFDCGEYILSD--GSVMQQRG---VLENRTDGG---VTLKAEQRRFIIHLVTTCVNMMAHVVP-------AVIEECTPSMVKDMMWNPVEARKRETNEERREELDQIINRVNTLRDLTLRIFTGAAVK--------DTLPASFWDVEGNAELREFAEEAVSLKKINFLDRLECVRNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWHAKLRSIIVQLTCVYRLGRSGNLLEAYYALSEAEIEVVMKGHRSHWSLNLDYGLPDLDRLASAQTTATDADLQGESSHALRLAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKFFSHARFGKKLVPPLMGNASCREPAKQAIKASGKLFDVARNGRAKATAEKG-------GGVGTAAKVRQQRVVLLDLTPEEREKVMDMFMAAIAKNSCGRLMDAIRKHDPGLVEWGK 3354
+E LD V+F E Y N +P IG+I+G+T+V +DG + V S + G Y L+ G+ ++ G VLENR G TL+ +QR+F I L+ NM +VP A+ E V +M + + E R E++ +T R T AA+K D L EG+ +LR FAE SL ++N L +L + ++ + K+ + Y KP +G + A + ++ YRLGR ++ E Y+ L + E+ + K R W + D D T++T ++ S A R AV+R + P++ P ++ RD EK+GS+ S ++ R K ++ ++ N + + I + +F++ ++ A A+K G G + +++ ++ LL L P + E+ + + A+ KN G L I DP + WGK
Sbjct: 163 LEDLDEVYFNVGTKGFKESY-NMVSKVNPGDIGIIMGETRVKMDGVHYTVVSVEDGLYSLAKDGGAASKELGQWEVLENRIHDGQGHATLEEDQRKFAISLILQYGNMWLTMVPYLNHGQAAIPEGEGRVQVSNMTYKMTDV-SGEGLAARHEDV------------MTARSLTKAALKKLKMVDAIDGLRFPGLAQEGDDDLRTFAEREGSLGELNGLQKL--LGDKSGLDKKILLN--IRSRYPPGMKP---TGDFKAVINHMLRVQQYAYRLGRPASIHEGYHPLCDKEVTALSKFFRG-WEED------DDDSGQCLGTSSTSENM----SWATRFAVRRSSMIYPDLFPASLE-IESRDTEKHGSVVDSSKHVNVYTKTRKAKHVIKWILQNGGVCDNMDKKIDTAVAIFELTKSTVTDARAKKKDYDDTTTGSQGDSNTLKKGKLPLLLLDPLKSEECLRLMTEALTKNGWGYLRGQIDLIDP--MAWGK 623 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6656.17521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6656.17521.1 >prot_Ecto-sp13_S_contig6656.17521.1 ID=prot_Ecto-sp13_S_contig6656.17521.1|Name=mRNA_Ecto-sp13_S_contig6656.17521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1129bp MSAPLVDPCGPGDVIWAVQYLAELLEMNFKELVDDFEAHVTDDGEEVDGEback to top mRNA from alignment at Ecto-sp13_S_contig6656:1299..7414- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6656.17521.1 ID=mRNA_Ecto-sp13_S_contig6656.17521.1|Name=mRNA_Ecto-sp13_S_contig6656.17521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6116bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6656:1299..7414- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6656:1299..7414- >mRNA_Ecto-sp13_S_contig6656.17521.1 ID=mRNA_Ecto-sp13_S_contig6656.17521.1|Name=mRNA_Ecto-sp13_S_contig6656.17521.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3387bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6656:1299..7414- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |