prot_Ecto-sp13_S_contig6652.17516.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6652.17516.1
Unique Nameprot_Ecto-sp13_S_contig6652.17516.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6652.17516.1 vs. uniprot
Match: D7FXT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT8_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.330e-45
Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0 
Query:    1 LTAEALARPAVVLDRSGRVIVVEKHLLAFDEVWPADLPALRPLRLNLRRSCGAGRANGDVGHSDDIARKGEGQSGRGRFGGP 82
            LTAEALARPAVVLDRSGRVI+VEKHLLAFDEVWPADLPALRPL+LNLRRSCGAGRANGDVGHSD+ ARKGEGQSG GRFGGP
Sbjct:   66 LTAEALARPAVVLDRSGRVILVEKHLLAFDEVWPADLPALRPLQLNLRRSCGAGRANGDVGHSDNNARKGEGQSGGGRFGGP 147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6652.17516.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXT8_ECTSI1.330e-4593.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6652contigEcto-sp13_S_contig6652:7601..8083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6652.17516.1mRNA_Ecto-sp13_S_contig6652.17516.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6652 7601..8084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6652.17516.1 ID=prot_Ecto-sp13_S_contig6652.17516.1|Name=mRNA_Ecto-sp13_S_contig6652.17516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
LTAEALARPAVVLDRSGRVIVVEKHLLAFDEVWPADLPALRPLRLNLRRS
CGAGRANGDVGHSDDIARKGEGQSGRGRFGGP
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