prot_Ecto-sp13_S_contig12050.1751.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12050.1751.1
Unique Nameprot_Ecto-sp13_S_contig12050.1751.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length144
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12050.1751.1 vs. uniprot
Match: D8LF96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF96_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 5.010e-83
Identity = 138/144 (95.83%), Postives = 139/144 (96.53%), Query Frame = 0 
Query:    1 MDRVVDDLKLRTRETNAKMKRFVSDSEWLTIDQALGETGTYASVLMSRATGGDTGLHIAITLGSLRAAQVMELVLRIAQLEEDFSRKGITARRLTAAEKASLAQLDRVVHKANEYRLFGHGLACYFVDRLSDWPALQ--ARSAE 142
            MDRVVDDLKLRTRETNAK KRFVSDSEWLTIDQ LGETGTYASVLMSRATGGDTGLHIAITLGSLRAAQVMELVLRIAQLEEDFSRKGITARRLTAAEKASLAQLDRVVHKANEYRLFGHGLACYFVDRLSDWPALQ  AR+ E
Sbjct:  114 MDRVVDDLKLRTRETNAKTKRFVSDSEWLTIDQTLGETGTYASVLMSRATGGDTGLHIAITLGSLRAAQVMELVLRIAQLEEDFSRKGITARRLTAAEKASLAQLDRVVHKANEYRLFGHGLACYFVDRLSDWPALQEEARACE 257
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12050.1751.1 vs. uniprot
Match: A0A6H5L644_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L644_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.040e-61
Identity = 136/262 (51.91%), Postives = 137/262 (52.29%), Query Frame = 0 
Query:    1 MDRVVDDLKLRTRETNAKMKRFVSDSEWLTIDQALGETGTYASVLMSRATGGDTGLHIAITLGSLRAAQV--------------------------------------------------------------------------------MELVLRIAQLEEDFSRKGITARRLTAAEK----------------------------------------ASLAQLDRVVHKANEYRLFGHGLACYFVDRLSDWPALQARSAE 142
            MDRVVDDLKLRTRETNAK KRFVSDSEWLTIDQ LGETGTYASVLMSRAT GDTGLHIAITLGSLRAAQV                                                                                MELVLR AQLEEDFSRKGITARRLTAAEK                                        ASLAQLDRV HKANEYRLFGHGLACYFVDRLSDWPALQARSA+
Sbjct:  117 MDRVVDDLKLRTRETNAKTKRFVSDSEWLTIDQTLGETGTYASVLMSRATSGDTGLHIAITLGSLRAAQVFVEEGCDVTILNDDGVSAVAILRQDGGDKETCFRQTKCIYLQWNLTASEMHNMSSKHPKPAMPSNTLHAPRALSDNFDKVMELVLRTAQLEEDFSRKGITARRLTAAEKVSPATYAANVHAPSFLARRLSVHHTPRGAGTSNATALGAQASLAQLDRVAHKANEYRLFGHGLACYFVDRLSDWPALQARSAD 378
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12050.1751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF96_ECTSI5.010e-8395.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L644_9PHAE1.040e-6151.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12050contigEcto-sp13_S_contig12050:1085..4546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12050.1751.1mRNA_Ecto-sp13_S_contig12050.1751.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12050 2..4567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12050.1751.1 ID=prot_Ecto-sp13_S_contig12050.1751.1|Name=mRNA_Ecto-sp13_S_contig12050.1751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp
MDRVVDDLKLRTRETNAKMKRFVSDSEWLTIDQALGETGTYASVLMSRAT
GGDTGLHIAITLGSLRAAQVMELVLRIAQLEEDFSRKGITARRLTAAEKA
SLAQLDRVVHKANEYRLFGHGLACYFVDRLSDWPALQARSAES*
back to top