mRNA_Ecto-sp13_S_contig6651.17514.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6651.17514.1
Unique NamemRNA_Ecto-sp13_S_contig6651.17514.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: D8LPW9_ECTSI (Putative S-adenosylmethionine-dependent methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW9_ECTSI)

HSP 1 Score: 671 bits (1732), Expect = 6.670e-238
Identity = 350/363 (96.42%), Postives = 354/363 (97.52%), Query Frame = 1
Query:   94 MMIAAQALFALTESRAFLLQPPISPPPNHSSRFNHFSSNSARRSPVAATHCLTASYARSTRTAIHAAAAKSRSSSG-RQGDDESFAEDQRYRRKARGANLRRDDAGLPSEKVYAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQVKAVKGDVMDVLYNPRRYGLETPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK 1179
            MMIAAQAL ALTESRAFLLQPPISPPP HSSRFNHFSSNSARR+PVAATHCLTAS AR+ RTAIHAAAAKSRSSSG RQGDDESFAEDQRYRRKARGANLRRDD GLPSEK+YAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQ KAVKGDVMDVLYNPRRYGL+ PFDVITVTPPYEEVVY ELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK
Sbjct:    1 MMIAAQALLALTESRAFLLQPPISPPPTHSSRFNHFSSNSARRAPVAATHCLTASSARTARTAIHAAAAKSRSSSGGRQGDDESFAEDQRYRRKARGANLRRDDTGLPSEKIYAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQAKAVKGDVMDVLYNPRRYGLDAPFDVITVTPPYEEVVYTELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK 363          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A835Z8R5_9STRA (Putative S-adenosylmethionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R5_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.940e-104
Identity = 170/274 (62.04%), Postives = 210/274 (76.64%), Query Frame = 1
Query:  367 RKARGANLRRDDA-GLPSEKVYAPRQSAYGTPTV--GGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQVKAVKGDVMDVLYNPRRYGLETPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK 1179
            R+ RGA+L+RD+  GLP E VYAPR S Y T     G +G   +VR QG ERE  +NNA RL+V GG+AKGRRLESP+V+LRPMM KVKEAL++TL+ FG+FE    RFLDLF GSGSVG+EALSRGA H TFVD A +CC V  RNA  CGF  Q  AV+GDV+ VL  P  +GL+ P+DV+T+TPPY EVVY +L+ A + S LV +DT+VVIEYPVELGC+PH IGDG +VGLRNRRYGRTV+GV++  P+G+   + DSRPEEF+S+KK+
Sbjct:   79 RRPRGAHLKRDEVTGLPIEAVYAPRFSPYLTKKKLSGTSGGSKRVRAQGSEREEGLNNAQRLRVLGGVAKGRRLESPEVYLRPMMGKVKEALYNTLLSFGLFEGAGPRFLDLFCGSGSVGVEALSRGASHVTFVDLAAECCAVAERNAVACGFEGQGSAVRGDVLRVLSQPSAFGLDAPYDVVTITPPYAEVVYGDLIAAAASSPLVREDTIVVIEYPVELGCLPHVIGDGRLVGLRNRRYGRTVLGVYICRPTGRLY-LADSRPEEFISLKKQ 351          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A6V1VNJ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VNJ1_HETAK)

HSP 1 Score: 265 bits (676), Expect = 1.310e-79
Identity = 141/279 (50.54%), Postives = 191/279 (68.46%), Query Frame = 1
Query:  376 RGANLRRDDAGLPSEKVYAPRQSAYGTPT------------VGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQV-KAVKGDVMDVLYNPRRYGLETPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIK 1173
            R A L +++ G+P ++V APR       +                    ++R QG++RE   NN  +L+V GGIA+GR++ESPDVFLRPMM KVKEALFS+L   G+F++  A+ LDLFSGSGSVGIEALSRGA +A FVDFAK+CC+V ++N    GF  Q  +AV   V D L +P RYG +  FD++TVTPPYEEVVYA+LV+A++ S  V +D +VV+EYPVELG +PH +GDG ++GLRN+RYGRTV+  ++  PSG+     + +PEEF  +K
Sbjct:   37 RQAQLPKNEDGVPMQQVKAPRPKRSSVASREKEELKKKLKXXXXXXXXXRIRAQGKKREGGFNNPNKLRVMGGIARGRKIESPDVFLRPMMGKVKEALFSSLTNMGLFDSGSAKALDLFSGSGSVGIEALSRGASYACFVDFAKECCEVAMKNVVNVGFEPQQGQAVCASVYDFLADPARYGADHRFDLVTVTPPYEEVVYADLVQAVADSPAVGEDCVVVLEYPVELGSLPHLLGDGRLIGLRNKRYGRTVIATYIKNPSGKLE--YNPKPEEFERLK 313          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A7S2H4B1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H4B1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.090e-73
Identity = 124/242 (51.24%), Postives = 175/242 (72.31%), Query Frame = 1
Query:  466 GGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQVKAVK--GDVMDVLYNPRRYGL--ETPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAI---GDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSI 1170
            GG+  P K+RPQG+ RE  +NN + L++  G A+GRRL+SP+V+LRPMM KV+EA++ST   FG+++ +  R LD+FSGSGSVG+E+LSRGA H +FVD ++DCCD   RN   C F ++ KA    GD +  L +P   G+    PF V+T+ PPYEE+VYA+L++A++ S LV  DT+++IEYPVELGC PH I     G +VG+RNR+YGRTVV +++  P+G   ++ +SRPEEFVS+
Sbjct:  143 GGSSNP-KLRPQGKAREAGMNNPSNLRIMAGTARGRRLDSPEVYLRPMMGKVREAVYSTFTSFGLYDGDSTRHLDIFSGSGSVGLESLSRGASHCSFVDLSRDCCDAVERNLKWCNFEEEGKAAVYCGDAIRALSDPASMGIPDHLPFQVVTLCPPYEEIVYADLLEAVANSSLVTDDTIILIEYPVELGCFPHVIQRKDGGALVGVRNRKYGRTVVAMYIVNPTGNM-EVAESRPEEFVSV 382          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A7S1Z804_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z804_TRICV)

HSP 1 Score: 247 bits (630), Expect = 3.170e-72
Identity = 131/285 (45.96%), Postives = 187/285 (65.61%), Query Frame = 1
Query:  385 NLRRD-DAGLPSEKVYAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFET-EDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGF---------------SDQVKAVKGDVMDVLYNPRRYGLE--TPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAI---GDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIK 1173
            NLRR   A  PS     P  ++       G      +RPQG ER+V +NN + L++ GG A+GR+L+SP+V+LRPMM KV+EA+FST   FG+++   + R LD+F+GSGSVG+E+LSRGAGH TFVDFA DCCD   RN   CGF               +++ + V+ D +  L +P   G+   T + ++T+ PPYEEVVYA+L++A+  S LV  DT+++IEYPVELGC+PH I     G ++G+RNR+YGRTV+ ++V  P+G+  ++  SRPEEFVS++
Sbjct:   77 NLRRKVRASRPSLGHVVPSSASSSRTKKRGGSAGSALRPQGRERDVGLNNPSNLRILGGTARGRKLDSPEVYLRPMMGKVREAVFSTFTSFGLYDRGSNVRHLDIFAGSGSVGLESLSRGAGHVTFVDFADDCCDAVERNVKRCGFDVDEDDDDGTGRRAGTERTRVVRADYLRALRDPESVGIPPLTTYGIVTLCPPYEEVVYADLIEAVCNSRLVTDDTVIMIEYPVELGCLPHVITREDGGKVIGVRNRKYGRTVIAMYVVNPTGRM-EVASSRPEEFVSLR 360          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A7S3VWL2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3VWL2_EMIHU)

HSP 1 Score: 243 bits (620), Expect = 4.320e-72
Identity = 136/255 (53.33%), Postives = 176/255 (69.02%), Query Frame = 1
Query:  409 LPSEKVYAPRQSAYGTPTVGGTGRPGKVRPQGEE-REVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQVKAVKGDVMDVLYNPRRYGLETPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRP--EEFV 1164
            LP+ +V APR+     P      RPG++R QG++ +E S+    RL+V+GG  +GRRL +P V++RPMM++V+EALFS L   GV   E AR LDLFSGSG VGIEALSRG GHATFVDF+ +C      N    G  +++  V+ DVM VL +P R+GL+ P+D++TVTPPYEEVVYAEL+ A+  S L+ +D LV +EYPVELG  P  +G G +VGLRNRRYGRTVV ++V  PSG+    LD  P  EEFV
Sbjct:    6 LPTARVRAPRRLRNSAPGGQVASRPGRLRRQGKDGQERSLQ---RLQVSGGAHRGRRLVTPSVYMRPMMSRVREALFSMLYPTGVLR-ESARALDLFSGSGVVGIEALSRGVGHATFVDFSAECAGTIRSNCEALGEGERIDVVEADVMSVLADPSRHGLQGPYDLVTVTPPYEEVVYAELMGAICASPLLGEDCLVAVEYPVELGLFPPTLGGGRLVGLRNRRYGRTVVAIYVNRPSGK----LDLAPFSEEFV 252          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A7S3PYP8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYP8_9STRA)

HSP 1 Score: 238 bits (607), Expect = 6.460e-69
Identity = 114/242 (47.11%), Postives = 174/242 (71.90%), Query Frame = 1
Query:  466 GGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSD--QVKAVKGDVMDVLYNPRRYGLETPF--DVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAI---GDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSI 1170
            GG+G P K+R QG+ R   +NN + LK+ GG A+GR+++SP+V+LRPMM KVKEA++ST   FG+++    R LD+FSGSGSVG+E+LSRGA H TFVD A+DCC+   RN ++ GF +    + +  D +  L +P   G+   F  +++T+ PPYEE+VYA+L++A++ S +V  DT++++EYP+ELGC+PH I     G ++G+RNR+YGRT++ ++V  P+G+     +SRPE+FVS+
Sbjct:  116 GGSGGP-KLRAQGKSRADGMNNPSNLKILGGTARGRKIQSPEVYLRPMMGKVKEAVYSTFTSFGLYDGVATRHLDIFSGSGSVGLESLSRGAAHCTFVDLARDCCETSQRNIDIIGFDEPGMTRVICTDAITALRDPYSVGIPEGFTYNLVTLCPPYEEIVYADLLEAVANSPVVTDDTVILVEYPIELGCLPHVITRDDGGALIGVRNRKYGRTIIAMYVVNPTGRLDSSAESRPEDFVSL 356          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: I2CS21_NANGC (N6-adenine-specific methylase (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CS21_NANGC)

HSP 1 Score: 235 bits (599), Expect = 1.160e-67
Identity = 135/284 (47.54%), Postives = 186/284 (65.49%), Query Frame = 1
Query:  352 DQRYRRKARGANLRRDDAGLPSEKVYAPRQ-----SAYGTPTVGGTGRPGKVRPQGEEREVSINNAA----RLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQVKAVKGDVM-----DVLYNPRRYGLETPFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEF 1161
            D+R+++K R   L  D  GLP + ++APRQ      A     +GG+      + QG+  ++     A    RL++ GG A+G+RL+SP+V LRPMM+KV+EALFSTL  F +F +   R +DLF G+GSVG+EALSRGAG A FVD A +CC+   RN  LC F     AVKG ++     +VL  P+R G+   FD+I++TPPYEEVVYA+L++ +  S  VA+D+L+VIEYPVELG +P  IG G ++GLRNRRYGRTV+ ++   P+G+     D RPEEF
Sbjct:   64 DKRWQKKRRRVELGPD--GLPVQPIHAPRQIRGAGDARKIHELGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFD----AVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSG--DLRPEEF 339          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: B8BT17_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BT17_THAPS)

HSP 1 Score: 226 bits (577), Expect = 4.370e-66
Identity = 117/241 (48.55%), Postives = 162/241 (67.22%), Query Frame = 1
Query:  499 QGEEREVS-INNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFE-----------TEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSDQVKAVKGDVMDVLYNPRRYGLETP--FDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIG---DGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSI 1170
            QG  R+    NN + L++ GG  +GR+LESP V+LRPMM KVKEA++ST   FG++E           T   R LD+FSGSGSVG+E+LSRGA H TFVD + DCC  C RN   CG     K V  D    L  P   G++    +D++T+ PPYEE+VYA+L+ A++ S+LV +DT+++IEYPVELGC+PHAIG    G ++G+RNR+YGRTV+ +++  P+G   +  +SRPEEF++I
Sbjct:    1 QGVNRDTERYNNPSNLRILGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGLYENNQNIGGGGTGTCSTRHLDIFSGSGSVGLESLSRGARHCTFVDMSNDCCGACERNIVRCGGEPIAKVVCTDAFRALRQPETVGIDPSCKYDLVTLCPPYEEIVYADLLDAVANSELVTEDTVILIEYPVELGCLPHAIGREDGGVLIGIRNRKYGRTVIAMYIVNPTGA-RETAESRPEEFITI 240          
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Match: A0A448ZM65_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZM65_9STRA)

HSP 1 Score: 225 bits (574), Expect = 3.430e-64
Identity = 129/270 (47.78%), Postives = 180/270 (66.67%), Query Frame = 1
Query:  382 ANLRRD-DAGLPSEKVYAPRQSAYGTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGFSD---QVKAVKGDVMDVLYNPRRYGLET--PFDVITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVEL-GCMPHAI-GDG-TMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFV 1164
            ANL+R  DA  P      P  +   T   GG+  P K+RPQG+ RE  +NN + LK+ GG A+GRRL+SP V+LRPMM KV+EA++STL+ FG+++    R LD F+GSGSVG+E+LSRGA H TF D A+DCC    RN   C F       + V  DV+ +L  P   G+     FD++T+ PPYEEV YA+L+ A + S LV +DT+V++EYPVEL G +PH   G+  TM+G+RNR+YGRTV+ +++  P+G+  ++ +SRPEEF+
Sbjct:   86 ANLKRKVDAKRPPLGHIVPEDTR--TKGSGGSANP-KLRPQGKAREAGLNNPSNLKIFGGTARGRRLDSPSVYLRPMMGKVREAVYSTLLSFGLYDYP-VRHLDCFAGSGSVGLESLSRGAKHCTFCDLAEDCCAAISRNIPWCQFDGPEYSTRIVNADVLRLLREPLAVGMPEGEKFDIVTICPPYEEVTYADLLDATANSPLVKEDTIVLMEYPVELWGELPHVYSGESVTMIGIRNRKYGRTVIAMYICNPTGRI-ELAESRPEEFI 350          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6651.17514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW9_ECTSI6.670e-23896.42Putative S-adenosylmethionine-dependent methyltran... [more]
A0A835Z8R5_9STRA1.940e-10462.04Putative S-adenosylmethionine-dependent methyltran... [more]
A0A6V1VNJ1_HETAK1.310e-7950.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H4B1_9STRA2.090e-7351.24Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1Z804_TRICV3.170e-7245.96Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S3VWL2_EMIHU4.320e-7253.33Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3PYP8_9STRA6.460e-6947.11Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
I2CS21_NANGC1.160e-6747.54N6-adenine-specific methylase (Fragment) n=2 Tax=N... [more]
B8BT17_THAPS4.370e-6648.55Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A448ZM65_9STRA3.430e-6447.78Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6651contigEcto-sp13_S_contig6651:565..5647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score679.5
Seed ortholog evalue9.5e-193
Seed eggNOG ortholog2880.D8LPW9
Model size2004
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Conserved hypothetical protein 95
EggNOG OGs2QSWU@2759,COG0742@1
Ec32 ortholog descriptionputative S-adenosylmethionine-dependent methyltransferase
Ec32 orthologEc-15_001850.1
Cds size1182
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6651.17514.1prot_Ecto-sp13_S_contig6651.17514.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6651 1387..5647 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463915.4399536-UTR-Ecto-sp13_S_contig6651:564..13861681463915.4399536-UTR-Ecto-sp13_S_contig6651:564..1386Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6651 565..1386 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463915.4511263-CDS-Ecto-sp13_S_contig6651:1386..15961681463915.4511263-CDS-Ecto-sp13_S_contig6651:1386..1596Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 1387..1596 -
1681463915.4607394-CDS-Ecto-sp13_S_contig6651:2368..24851681463915.4607394-CDS-Ecto-sp13_S_contig6651:2368..2485Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 2369..2485 -
1681463915.4707193-CDS-Ecto-sp13_S_contig6651:2975..30471681463915.4707193-CDS-Ecto-sp13_S_contig6651:2975..3047Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 2976..3047 -
1681463915.4813726-CDS-Ecto-sp13_S_contig6651:3388..34901681463915.4813726-CDS-Ecto-sp13_S_contig6651:3388..3490Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 3389..3490 -
1681463915.4922898-CDS-Ecto-sp13_S_contig6651:4048..41111681463915.4922898-CDS-Ecto-sp13_S_contig6651:4048..4111Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 4049..4111 -
1681463915.503812-CDS-Ecto-sp13_S_contig6651:4447..46161681463915.503812-CDS-Ecto-sp13_S_contig6651:4447..4616Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 4448..4616 -
1681463915.5124164-CDS-Ecto-sp13_S_contig6651:5198..56471681463915.5124164-CDS-Ecto-sp13_S_contig6651:5198..5647Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6651 5199..5647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6651.17514.1

>prot_Ecto-sp13_S_contig6651.17514.1 ID=prot_Ecto-sp13_S_contig6651.17514.1|Name=mRNA_Ecto-sp13_S_contig6651.17514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=394bp
MHAMAPQQPRGGTRRSHATITATSCSARAGWMMIAAQALFALTESRAFLL
QPPISPPPNHSSRFNHFSSNSARRSPVAATHCLTASYARSTRTAIHAAAA
KSRSSSGRQGDDESFAEDQRYRRKARGANLRRDDAGLPSEKVYAPRQSAY
GTPTVGGTGRPGKVRPQGEEREVSINNAARLKVAGGIAKGRRLESPDVFL
RPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHA
TFVDFAKDCCDVCLRNANLCGFSDQVKAVKGDVMDVLYNPRRYGLETPFD
VITVTPPYEEVVYAELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDG
TMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEFVSIKKK*
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mRNA from alignment at Ecto-sp13_S_contig6651:565..5647-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6651.17514.1 ID=mRNA_Ecto-sp13_S_contig6651.17514.1|Name=mRNA_Ecto-sp13_S_contig6651.17514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5083bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6651:565..5647- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATGCGATGGCTCCGCAGCAACCCCGTGGAGGGACCAGGCGAAGTCA TGCCACCATTACGGCCACCAGCTGCAGTGCTAGGGCTGGGTGGATGATGA TCGCCGCGCAAGCGCTCTTCGCGCTGACCGAAAGCCGCGCCTTTCTCCTG CAACCCCCCATTTCGCCCCCGCCGAACCACTCTTCAAGGTTCAACCACTT CAGCTCCAACTCGGCGCGGAGATCGCCGGTTGCCGCCACCCACTGCCTCA CAGCCTCTTATGCAAGGAGCACAAGGACTGCGATTCACGCGGCAGCAGCG AAGTCCAGGAGCAGCAGCGGCCGCCAAGGCGACGACGAGAGCTTCGCGGA GGACCAGAGGTACCGCCGCAAGGCGAGGGGGGCCAATCTGAGGAGGGACG ACGCGGGCTTGCCCTCGGAGAAGGTCTACGCTCCCCGACAGAGCGCCTAG TGAGTTAGCTCGTGCTGGGCGAACCAAGCATGTAGTGCCTGGCATGTCAG CATGGTACCAACAGCTTGTTGATGTGTGTGTAATCAACTTGTGTACTGCT GTAGAGCAGTTGTACTGTAGTCGTGAACTGCAATCGTACAGTCCAATTCC AAGCGACGGTTGGTGTCCAAAAAGTACGTACACGGCTTTCTGATTTGCCA CGGCTTTCTGATTTGCCAGTGCAATAGGTTGAATTCCCAACTGTTTGCTC GTTGACGGGCTGAGCGCGATTGTCGGCAACTCCGTGGGACATTTTTTTTT GACAGAAACGCTCTAACCTTGAGAATCAATCGCTCCACAGCCGTGTGCCG CCTGACCACCCACCCCACTACATACCATTTCTGCGAAGTACTCCGTTCAA CCCGTCATTTCCTCGCCACCCGCGCTCACGACGGCAGCGGAACGCTGCTG CTGCAGCAGCGTACACGCACACGGAAAACACACTCTTGTACTGTACCGCG ACCATTGCCACTTGAAGCCACAAAAAATGAAGTAGATGGGGAAAGAAAAA ATTCATCGAGCCCCCTCCTCCGCCCACGCAGTGGCACGCCGACGGTAGGG GGAACGGGGCGCCCCGGCAAGGTTCGGCCACAGGGGGAGGAGAGGGAAGT GTCCATCAACAACGCGGCGCGATTGAAGGTGGCCGGGGGCATCGCCAAGG GTCGGCGGTTAGAATCCCCGGACGTGTTTCTGCGCCCCATGATGGCCAAG GTGGGGATGGATATCAGAGAGTGGCGTTTGTAAAAGAGGTGTTTTTTTGC CGTGCGTTCTTCAGTGCCGGGAACGAAGTTTTGTGACACGGCGCGATTGA TTTGTCTGGGGGAAGAACAAGTGCAAATGGCGCGGGAGAGGCGAGCGCTT GGTAACCGAGTAGCTGGTCCTGACCCGGGCACCCCAAACGCAGCACTCCC TTCCACACGATAGTTTCGTCCTCGACGAGGTCGTACACCAGCTGCACAGC GCCCTACGTCTACACAGCCTTTTCTTCGCACGCATGTTTCTAATCCGGCT AAGTCCGCGGCAATTCTGTGAAACAAACGTGGCCAGGTTAAGGAGGCGTT GTTCAGCACCCTCATGGGCTTTGGGGTGTTCGAGACCGAGGATGCACGGG TGAGCGATGAAGAGCGTCAGTATTCAATCGCAGCAGCGATACATCTTTCG TCCTCCTTTTCACATACATATCTGCTGCTATCAGCTGCCGTTGTTGGACT TCTCAACCTGAAAGAGAGTCGTCCTTGTTGCTGGGTTCACTCCATCTCTT GGATGTTGCCCCGTGTCCAACATCCCAGGAGATGAGCTCATTGCTGCGGG GTTGAGTCGCAAGCGGTGAAGTTAGCAGGGTATCGAATTGATGTATGGAC GCGGGAAAGCGCGCCCGAGGGTAAACCGTTGCCACGATGTTGCGTCCTAG TCTACGGCGGTAGATTCGGCTGGCGTCAAAAAGGTCTGGCATTTCTCTCG TGTGCCGTTGGTTGTTGTACGGTCTGGTGTTGTCATGACATGATAAGTCT TTCGCCGTCGGACCTCTTAGCAGCAGTTGTCGCAGCCCCTCTGCAGCTTG CCGTTTCAACGGCGGGATGACGTGCCCTCTGCGCCCACCCCTTGAACTCA CTTCTATTTCCCCCTCACCCATTTGTTGACGCGTTTTTGTTCTCCGATCG TCTGCAGTTCCTCGATCTTTTTTCCGGGTCTGGTTCGGTGGGGATTGAGG CACTCTCGAGAGGGGCCGGTCACGCCACGTTCGTCGACTTCGCGAAGGAC TGTTGCGATGTGAGTGGGTGCCGCAGTGGAGCTCCTGCTCCCGTCTTCCT CACGTGCGCTGGAGCTGGCGGGGGAAAAGGGAGTAGGGTGTACTCATGTA AACGCATGCCGTAGTCGTTAGACCATCGAGGGGGTTCGCTACGTTCGTGC GGTGCAGTAGGGATCATGCCAAAGGGGCCAAATCTGCGAAATCCCCGTGT GGGGCGCTGAAGGTGCATTCACTCAGCACGGACACCATGTTGTCCGTACT CGATGCCTCCACACTAAAGAAGGCGTGTCGTGTCAGCATTTACTCGTCTT ATCGATTTTGTTCCTTCTTTTTTCGTTCTCTGAAATGCTCCTCCCCGCAG GTGTGTCTCCGTAACGCCAACCTGTGCGGCTTCTCCGATCAGGTCAAGGC TGTCAAAGGAGATGTTATGGATGTGAGGGAACACGCAGAGAGAAAAAGAT TTCGGAGTTCTTTTCCCTGCCCTCCTCGTTGCTTTTAGGGCGTGCGAAGA CCTAACGTATTCCTCGACGATATGTGGTAGCACACACCCGCTCGAGTGGT GCGATTACCGGTAGATGGCACAAGACATCCTTGAAGACATCACACCCCCG GTATCGATTTCCACAGCTACATTACTCTACACCGAAGAGGTTGTGGGAGT CAAACGATACGTTTTAGGAAAATTCTCGACTAGAGGGTTCCGACGCCGCC ATTTTTGGGCGCCGCCACTCCTTCTGCTGCGGAGAAATCGAGCTTTGAAA ATCGGTGCAGGAGAGTGGTATCGTGTATCATGTCATGTCACGTACCGATA CTCGTCGGACCCCGTCCCGCACTACCAAGGCAATGTGTGCATGCTCGCAA GTTTTGAGTTGATACCGCCCCTCAAGTTCTTCACACGCAATTTTTCGTTT GGTTGACGTCAGGTTTTGTATAACCCTCGAAGGTACGGCCTAGAAACCCC GTTCGACGTGATCACGGTCACACCGCCTTACGAGGAAGTCGTCTATGCCG AGCTCGTCAAGGCTCTCTCCGTCAGCGACGTAAGTGGCCAGCAGACAGGG AGGATGACGGTTGAATCGGGATCAAACGCTGTGCCATATCGTCATCAACA ACCAATTTCGTTTGCCCGTCTTTTGTTTTTGGTCGATTGACGTGTTTGGC GCATAAAAAGGTCATGGGGTCCATCAGCTCTCCCAAGCGTTGTAAAGGTT CTGGGAATGCCGCTCGTTTGCTTGCCCCAGCATGCGCCCTACGCCTCCCG TGTAGATGCACCTGTGATTTAGATGACCATGCGCAATGCTTCGGAGAAGT GGCACACCGTCTGCAAGAGAGCGGGCGGAGTTTGTCATTCTCCTCAAGCT GTTGCTGGTCCTACTGTGTGGAATTTTCAAGAGAGTCGGCGGGCGTGTTG CAGGCGGGGTGGGAATAGGGAAATGGGGCGAAGTGTAGGGAGTAACAACC AAAGCTCTGCGTTGCACTTGAAGACAAGCTTCTTGTCCTTCCTCGAAGTC GCCTCCTCCACCCCCAAATTATCGCGTGATCAACCCCTGTTCGGCGTCGG GAATCCTGTGACGACAAGCGACATTGCACTATCAGCACAAGCTGCCACCA TCAACCACAACAACAACGACAACACAACTAACAAACGCAATATGTTGTGC GATCTAAAGCCTTACTTGGCACCCTTTTTACGATGAACTACACACGCACT ACCACCCAACATCTCCACCAACCACCGCAACCCCACCATCACGACCAACG CTCACACGGCCAACACCAACCCACACCTACACCCAACCCCTGCTTCAACA GCTCGTGGCGCAGGACACCCTGGTTGTGATCGAGTACCCCGTCGAGCTCG GCTGCATGCCGCATGCCATCGGCGACGGCACCATGGTTGGGCTGCGGAAC CGGCGGTACGGGCGCACTGTGGTCGGGGTGTGGGTGTACCTCCCCTCCGG ACAGTTCGGCGACATGCTGGACTCCCGCCCGGAAGAATTCGTCAGCATCA AGAAGAAGTAGAGAGATAGACGGATGCTTCATGTGTCAGCGTCAAGAAGG AATGAGACAGATGGATGCATTGCTTCACATGTCAGCGTTCATGAAGGGAG TCGAACCAGCTTCAGACCTCAGCGTATCTATGAATACAGAACACGTCACC AACTTCGAAAGTAGGTAGGGGAGGAGGTGGAGGCGTAAACCGGCAAATGA CTACCGTGGGAGGTATGGATACCACTGTTTGATTGGCTCCATACTAGTTG AGGAGAATGGAGAAGGGGAAACGGTGGAACACATCCCCCATCGCTGTCAA GACCCTCTCGGTGTTGTCCTCGAATCTCACTCCTTGATTATTTCCTCTGT GTTGTGTTGTGAATCTAACCCCTAAGCACCCGAGTTCTTGCAGGTTAAAG AATACGTTTGGATTCAAAATCTTCCGTGCGAAACTGCTTGCGGCACTCCT CGCGTTTTTTACTACGATGTTCCTCTTGCGTGGTGACGAGGCGCTGTAGA AGCTTAAGGCTTGTCATGTAAGCGCCTCGTGGCGATGTTGAAAACGACTT CATTCCGTGTTTCGCATCGAGACTCGTGCTGGTGAGTAGATAACTGCCCT TTTGTTTCACTCCCTGTGTACTGCCGTGTTTCCAAGGGGAATGGACGCTT TGTGAATCAGGGCCACCGTAATTCGTTCCGTATTGCATTTCCGCCTTGCC GGTACAACGAGCTTTTTCCCAGGGCCGAGAGCGCGGCGTCAAGTTGATGC TGATGTTATTGACTTGCACCTATCCGTTTCATGTTTTGATGCTGAAGTCA TTAGCGTGCACCTATCCGTTTACCAAGTCGCGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6651:565..5647-

>mRNA_Ecto-sp13_S_contig6651.17514.1 ID=mRNA_Ecto-sp13_S_contig6651.17514.1|Name=mRNA_Ecto-sp13_S_contig6651.17514.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1182bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6651:565..5647- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATGCGATGGCTCCGCAGCAACCCCGTGGAGGGACCAGGCGAAGTCA
TGCCACCATTACGGCCACCAGCTGCAGTGCTAGGGCTGGGTGGATGATGA
TCGCCGCGCAAGCGCTCTTCGCGCTGACCGAAAGCCGCGCCTTTCTCCTG
CAACCCCCCATTTCGCCCCCGCCGAACCACTCTTCAAGGTTCAACCACTT
CAGCTCCAACTCGGCGCGGAGATCGCCGGTTGCCGCCACCCACTGCCTCA
CAGCCTCTTATGCAAGGAGCACAAGGACTGCGATTCACGCGGCAGCAGCG
AAGTCCAGGAGCAGCAGCGGCCGCCAAGGCGACGACGAGAGCTTCGCGGA
GGACCAGAGGTACCGCCGCAAGGCGAGGGGGGCCAATCTGAGGAGGGACG
ACGCGGGCTTGCCCTCGGAGAAGGTCTACGCTCCCCGACAGAGCGCCTAT
GGCACGCCGACGGTAGGGGGAACGGGGCGCCCCGGCAAGGTTCGGCCACA
GGGGGAGGAGAGGGAAGTGTCCATCAACAACGCGGCGCGATTGAAGGTGG
CCGGGGGCATCGCCAAGGGTCGGCGGTTAGAATCCCCGGACGTGTTTCTG
CGCCCCATGATGGCCAAGGTTAAGGAGGCGTTGTTCAGCACCCTCATGGG
CTTTGGGGTGTTCGAGACCGAGGATGCACGGTTCCTCGATCTTTTTTCCG
GGTCTGGTTCGGTGGGGATTGAGGCACTCTCGAGAGGGGCCGGTCACGCC
ACGTTCGTCGACTTCGCGAAGGACTGTTGCGATGTGTGTCTCCGTAACGC
CAACCTGTGCGGCTTCTCCGATCAGGTCAAGGCTGTCAAAGGAGATGTTA
TGGATGTTTTGTATAACCCTCGAAGGTACGGCCTAGAAACCCCGTTCGAC
GTGATCACGGTCACACCGCCTTACGAGGAAGTCGTCTATGCCGAGCTCGT
CAAGGCTCTCTCCGTCAGCGACCTCGTGGCGCAGGACACCCTGGTTGTGA
TCGAGTACCCCGTCGAGCTCGGCTGCATGCCGCATGCCATCGGCGACGGC
ACCATGGTTGGGCTGCGGAACCGGCGGTACGGGCGCACTGTGGTCGGGGT
GTGGGTGTACCTCCCCTCCGGACAGTTCGGCGACATGCTGGACTCCCGCC
CGGAAGAATTCGTCAGCATCAAGAAGAAGTAG
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