mRNA_Ecto-sp13_S_contig1205.1750.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: D8LM95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM95_ECTSI) HSP 1 Score: 844 bits (2181), Expect = 7.130e-304 Identity = 442/497 (88.93%), Postives = 458/497 (92.15%), Query Frame = 1
Query: 82 MSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFAPKEVLAARDLPLDERVGECTSLKLQGNEEMRNGCPDKACHLYEQALAMFWYLKNHNINWKTSGIKDEDMEEVNFCLGRGSEKSTEEIRDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDCLIKAFMAKLKTGKAKQKETDRATFAGMFGRGDICVPGGEADASRLHAPTHGNVSAGGDALRGKPDIAAGKHDLSMEYGQADAVNATRSAGGGDPLETRRHVEERVKYFKDMARKCDEEGLEEEAEQYRERFAAIEELLSEHDRQQHECAAGHERAHVEMDWRNPSEAMLKRAREEEYDLSNPAVVGFLVKMQEMHRRKLTTRQGPDDDDDQENWSSDVWEGAILCMSRAEVTSFLTDELGIDPRPPDTPLGTLRLLAASRVLGRPSLGEGTSSPGRQKSAANEEGSKRTRGDWR 1572
MSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFA K+VLAARDLPL+ERVGECTSLKL+GNEEMRNGCPDKAC LYEQALAMFWYLKNHNINWKTS IKDED+EEVNF LGRGS+KSTEEIRDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSD LIKAFMAKLKT KAKQKETDRATFAGMFGRG+IC PGGEA+ASRLHAPTHGNVSAG DALRGKPD AAGKHDLSME+GQADA NATRSAGGGDPLETRRHVEERV+Y KDMARKCDEEGLEEEAEQYRERFAAIEELLS EMDWRNPSEAMLKRAREEEYDLSNPAVV FLVKMQEMHRRKLTT+QGP+DDDDQ+NWSS+VWEGAILCMSRAEVTSFLT ELG+D RP DTPL TLRLLAASRVLGRPSLGEG SSPGRQK AANE+GSKRT W+
Sbjct: 1 MSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFATKKVLAARDLPLEERVGECTSLKLEGNEEMRNGCPDKACQLYEQALAMFWYLKNHNINWKTSEIKDEDIEEVNFWLGRGSDKSTEEIRDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDSLIKAFMAKLKTEKAKQKETDRATFAGMFGRGNICDPGGEAEASRLHAPTHGNVSAGSDALRGKPDRAAGKHDLSMEHGQADAGNATRSAGGGDPLETRRHVEERVEYLKDMARKCDEEGLEEEAEQYRERFAAIEELLSXXXXXXXXXXXXXXXXXXEMDWRNPSEAMLKRAREEEYDLSNPAVVSFLVKMQEMHRRKLTTQQGPEDDDDQDNWSSNVWEGAILCMSRAEVTSFLTKELGVDARPADTPLETLRLLAASRVLGRPSLGEGASSPGRQKPAANEKGSKRTVWPWQ 497
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: A0A8K1CCI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCI0_PYTOL) HSP 1 Score: 171 bits (433), Expect = 6.830e-43 Identity = 132/445 (29.66%), Postives = 207/445 (46.52%), Query Frame = 1
Query: 88 FTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFAPKEVLAARDLPLDERVGECTSLKLQGNEEMRNGCPDKACHLYEQALAMFWYLKNHNINWKTSGIKDEDMEEVNFCLGRGSEKSTEEIRD-LNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDCLIKAFMAKLKTGKAKQKETDRATFAGMFGRGDICVPGGEADASRLHAPTHGNVSAGGDALRGKPDIAAGKHDLSMEYGQADAVNATRSAGGGDPLETRRHVEERVKYFKDMARKCDEEGLEEEAEQYRERFAAIEELLSEHDRQQHECAAGHERAHVEMDWRNPSEAMLKRAREEEYDLSNPAVVGFLVKMQEMHRRKLTTRQGPDDDDDQENWSSDVW-EGAILCMSRAEVTSFLTDELGID 1416
F ++M +A+ ++T A LR FD+ P + Q SMF + VL+ RD +R+ ++K GN+ G D+A YE+ALA+F Y +N + WK GI+D+D+ V+F + +K+ +E D L VA LNIA + +Y T AC AL + P + KALY R AL+ PAS+GA E + A+ D+ +A + P + ++ +L+ + KQKE DRATF GMF RG++ Y D + G E V +D+AR C+ +G E A Q R + E R E+D+ NP++ M+ A+++ DL++P V L ++QE RRK T +Q + ++ + D E + M+ ++ L+ E GID
Sbjct: 9 FGDLMNKAVKLKTHQQAQLRTRFDSWPTYFQHSMFMQESVLSQRDKNFPDRIEAAEAMKSSGNDHFSKGDFDEAVAEYEKALAVFKYAENTDPGWKKKGIEDKDIHVVDF---KCDDKNDQERLDSLKVACYLNIAVSKFKLKEYPTCIHACGDALEIEPKNVKALYRRALALITPASSGALEFERALDDLHKAYSINPENRDVRKMYRELREQQVKQKEFDRATFTGMFNRGEV-------------------------------------------YDDVDTSVKPKEDGPETEEEREERFRNEVLEAEDLARMCESKGHTEYASQIRGKIE--------------EAKLARSRRRKEVDFFNPTQQMIDDAKKQGIDLADPQVQAMLHQLQEDERRKGTAKQEAGNGGVEDKQADDTAVESLLKSMTNTQIAQMLSRE-GID 392
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: A0A835ZDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ4_9STRA) HSP 1 Score: 140 bits (352), Expect = 9.980e-32 Identity = 118/417 (28.30%), Postives = 192/417 (46.04%), Query Frame = 1
Query: 76 GSMSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFAPKEVLAARDLPLDERVGECTSLKLQGNEEMRNGCPDKACHLYEQALAMFWYLKNHNINWKTSGIKDEDMEEVNFCLGRGSEKSTEEIR-------------------DLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDCLIKAFMAKLKTGKAKQKETDRATFAGMFGRGDICVPGGEADASRLHAPTHGNVSAGGDALRGKPDIAAGKHDLSMEYGQADAVNAT-RSAGGGDPLETRRHVEERVKYFKDMARKCDEEGLEEEAEQYRERFAAIEELLSEHDRQQHECAAGHERAHVEMDWRNPSEAMLKRAREEEYDLSNPAVVGFLVKMQ 1266
G+ SF ++Q+A+ +RTSTDA LR FD P F Q+++FAP VLA R LP+ ER+ +LK GN ++ ++A YEQAL+ Y+ N + +W GI+DED+ V+ G + +++R ++ VA LNIA AY + + + AC+ A+ +P SAKA + R +A +A A AGA D A+ D++RAA L +A + +R F+G+FG G++ V E ++ +R + D+ L E +A A ++A + L+ R V +A+ A E+ R + + G +R DWRN + M+ A+E DL+N AVV ++++++
Sbjct: 3 GAPSFHNIIQEAVKLRTSTDAPLRSWFDGLPVFLQSTLFAPDAVLAIRQLPMQERLKAAAALKDVGNVHLKEQRHEEAASSYEQALSCVVYVSNRHADWTKRGIRDEDLTLVDCD---GDPEHADDLRRVALSPDATVVHTYLPAATEVVVACYLNIALAYGRRGRHAAAVAACTRAIHTHPTSAKAHFRRAQARLASAGAGAHALDLAVADLARAAALGXXXXXXXXXXXXX-XXRAALRRRERGAFSGLFGWGEVVVGTAERVGAKDAGGAXXXXXXXXXGIRTRRDLQGAIEQLEKELEEATREGAEDKAAVIAETLDNMRGV---------LAQ------------------AVAEQXXXXXXRAPNHGSVGQQRP----DWRNATPEMIADAKEHGIDLTNAAVVDYILQLE 384
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: A0A7S1AJS7_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AJS7_NOCSC) HSP 1 Score: 120 bits (300), Expect = 4.270e-25 Identity = 107/396 (27.02%), Postives = 190/396 (47.98%), Query Frame = 1
Query: 97 MMQQAISIRTSTDANLRVDFDARPKFQQASMFAPK--EVLAARDLPLDERVGECTSLKLQGNEEMRNGCPDKACHLYEQALAMFWYLKNHNINWKTS--GIKDEDMEEVNFCLGRGSEKSTEEIRDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDCLIKAFMAKLKTGKAKQKETDRATFAGMFGRGDICVPGGEADASRLHAPTHGNVSAGGDALRGKPDIAAGKHDLSMEYGQADAVNATRSAGGGDPLETRRHVEERVK--YFKDMARKCDEEGLEEEAEQYRERFAAIEELLSEHDRQQHECAAGHERAHVEMDWRNPSEAMLKRAREEEYDLSNPAVVGFLVKMQ 1266
++Q+A+ ++++ R ++ P F Q ++F + E A R LP DER+ LK +GN+ + A + YE+A ++F+Y + + W+ + GI D+++ V+ G+ E+ E++ L VA LN+A +P + KALY R KA + P + A++TD AI+D+++A L P+D I+ +A+L+ +++Q+ DR TF GMF RG+I D L KP + + +++ E G+ G D LE R E ++ Y + G E++A++ ER ++ L + D++Q + ER DW NP+ M+ A++ DL+NP V L++++
Sbjct: 39 ILQEAVKLKSAQIGQKRKTYETWPYFVQHTLFHGEKDEFKAWRKLPFDERMEVAERLKAEGNDLFKQNNFMDAINKYEEAPSVFYYCYSKDAGWRKNNKGIDDDELVLVDDT-GQIPEE-VEKVNQLRVACCLNLAAXXXXXXXXXXXXXXXXXXXXXDPKNIKALYRRAKARIQPTGSTAYDTDCAIKDLTKATALDPNDTTIREMLARLRVERSEQRAKDRDTFTGMFERGEIY-----------------------DKL--KPRLIPSEGEVAEEKGEGXXXXXD---GEEDSLEKRIADAELLRDAYMSN--------GKEDQAKELNERIQQSKKYLKDRDKKQEQ----QERGLTGHDWSNPTPEMIDDAKKSGIDLNNPEVRAELMRLE 392
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: A0A2D4CAK1_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAK1_PYTIN) HSP 1 Score: 88.6 bits (218), Expect = 2.890e-15 Identity = 89/399 (22.31%), Postives = 154/399 (38.60%), Query Frame = 1
Query: 88 FTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFAPKEVLAARDLPLDERVGECTSLKLQGNEEMRNGCPDKACHLYEQALAMFWYLKNHNINWKTSGIKDEDMEEVNFCLGRGSEKSTEEIRDLNVALLLNIARAYSAQNDYTTSARACSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDCLIKAFMAKLKTGKAKQKETDRATFAGMFGRGDICVPGGEADASRLHAPTHGNVSAGGDALRGKPDIAAGKHDLSMEYGQADAVNATRSAGGGDPLETRRHVEERVKYFKDMARKCDEEGLEEEAEQYRERFAAIEELLSEHDRQQHECAAGHERAHVEMDWRNPSEAMLKRAREEEYDLSNPAVVGFLVKMQEMHRRK 1284
F ++M +A+ ++ A LR FD+ P++ Q SMF + V + RD P +ER+ ++K +GNE +G ++A YE+ALA+F Y +N + WK GI+D+D+ ++ E+ + + L ++ LNIA P + +K +++ K K + DRATF+GMF RG++ V Q+ N T G P R E+ + + +AR C+ G E A++ R + A + +R E+ + NP+ M++ A+++ DL++ V L +QE R+K
Sbjct: 9 FGDLMSKAVKLKGYQQAQLRTRFDSWPQYFQHSMFMQESVTSVRDKPFEERIACAEAMKAKGNEHFSSGDIEEAVAEYEKALAIFKYAENMDPGWKKKGIEDKDIRVIDVTPDDQEER--DRLTALKISCYLNIAD-------------------------------------------------------------PDNREVKXMYREMRELKTKXRRLDRATFSGMFNRGEVYVED-----------------------------------------QSSKPNVTDDPGDDGPD---RKFEKEIDEAETLARLCESRGHPEHAKEIRNKIA--------------QAKLARQRRRKEIFF-NPTPDMIEDAKKQGIDLTDRKVQEMLHHLQEEERKK 285
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: A0A7S2UXQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXQ6_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.060e-10 Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 88 FTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFAPKEVLAARDLPLDERV---------GECTSLKLQGNEEMRNGCPD-------KACHLYEQALAMFWYLKNHNINWKTSGIKDEDMEEVNFCLGRGSEK 441
F+E+M QA+ ++T++ A LR FD PK+ Q SMFA E+LA R+ P ER+ + L+++G + + G P A + YE ALA+F +L+N WK GI DE +E F +E+
Sbjct: 20 FSEVMNQAVKLKTASHAPLRSRFDGYPKWLQNSMFATDEMLADREKPFAERLKAAWDRKDKADALLLEVEG-KPVPLGAPGGVHGQTLDAQNTYEAALAVFEWLENTQPGWKKKGIYDEHLEYHKFSGDSSAEE 152
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Match: C1N8R9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8R9_MICPC) HSP 1 Score: 73.6 bits (179), Expect = 3.950e-10 Identity = 69/250 (27.60%), Postives = 119/250 (47.60%), Query Frame = 1
Query: 73 TGSMSFTEMMQQAISIRTSTDANLRVDFDARPKFQQASMFAPKE---VLAARDLPLDERVGECTSLKLQGNEEMRNGCPDKACHLYEQALAMFWYLKNHNINWKTSGIKDEDMEEVNFCLGRGSEKSTEE---IRDLNVALLLN----IARAYSAQNDYTTSARA------CSAALTLNPCSAKALYLRGKALVAPASAGAFETDAAIRDVSRAAKLAPSDCLIKAFMAKLKTGKAKQKETDRATFAGMF 774
T S SF +++Q+A ++T+ + R +++A P F + +M K+ V +D + E++ T K +GNE G + A Y +A+A+F Y W + +E N + E +T R ++LLN +A+ +A++ T C+ L ++ KA Y R AL + S+ A E A++D++RAA+LAPSD L++ + K ++ Q DR T+ G F
Sbjct: 29 TSSESFNDILQKAAEMKTAQLKDKRREWEASPDFMKNTMAYDKDDTLVALRKDGTVREKIDHATPAKARGNELYAEGLYEDAMSEYTKAIAVFRY-------WNRETVGNEQ----NLVCFKDDETTTPTDPAARAFVSSVLLNASACMAKIDAARDPDTPPTHVDGIVWTCTEVLNIDDACVKAYYRRAIALASAGSSVALEK--AVKDLARAARLAPSDALVRDALRKHRSEYDAQCAKDRKTYGGAF 265 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1205.1750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1205.1750.1 >prot_Ecto-sp13_S_contig1205.1750.1 ID=prot_Ecto-sp13_S_contig1205.1750.1|Name=mRNA_Ecto-sp13_S_contig1205.1750.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=657bp SRSHTAVPAESKHHQDIYSFMRKRTGSMSFTEMMQQAISIRTSTDANLRVback to top mRNA from alignment at Ecto-sp13_S_contig1205:4564..14814- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1205.1750.1 ID=mRNA_Ecto-sp13_S_contig1205.1750.1|Name=mRNA_Ecto-sp13_S_contig1205.1750.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10251bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1205:4564..14814- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1205:4564..14814- >mRNA_Ecto-sp13_S_contig1205.1750.1 ID=mRNA_Ecto-sp13_S_contig1205.1750.1|Name=mRNA_Ecto-sp13_S_contig1205.1750.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1971bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1205:4564..14814- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |