mRNA_Ecto-sp13_S_contig12046.1748.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: D7FWV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV9_ECTSI) HSP 1 Score: 528 bits (1360), Expect = 1.170e-179 Identity = 252/266 (94.74%), Postives = 260/266 (97.74%), Query Frame = 1
Query: 25 FPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFEPGWIECSQEGTGLIQAETQAWMTAPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHEVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG 822
F +S+RYTDTTKTVFACLA+APVLPIA+WI L SL LSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRF+ GWIECSQEGTGLI+AETQ+WMT PQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQH+VDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG
Sbjct: 679 FHLSDRYTDTTKTVFACLAYAPVLPIAMWIGLLSLSLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFDQGWIECSQEGTGLIEAETQSWMTGPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG 944
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE) HSP 1 Score: 527 bits (1357), Expect = 1.820e-175 Identity = 252/266 (94.74%), Postives = 259/266 (97.37%), Query Frame = 1
Query: 25 FPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFEPGWIECSQEGTGLIQAETQAWMTAPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHEVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG 822
F +S+RYTD TKTVFACLA+APVLPIA+WI L SL LSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFE GWIECSQEGTGLI+AETQAWMT PQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQH+VDAYVPQIKSSHQPLPLLACDLD+VEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG
Sbjct: 667 FHLSDRYTDMTKTVFACLAYAPVLPIAMWIGLLSLALSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFEQGWIECSQEGTGLIEAETQAWMTGPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHDVDAYVPQIKSSHQPLPLLACDLDYVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPPPAPFEAIGNG 932
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: A0A7S2YHU2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHU2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.910e-18 Identity = 70/298 (23.49%), Postives = 137/298 (45.97%), Query Frame = 1
Query: 22 PFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRH-LALAVLAHCVFALYYYAGWPFDRICR--------FEPGWIECSQEGTGLIQA--------------------------------ETQAWMTAPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMPFSQLTSRYQHEVDAYVPQIKSSHQPLPLLACDLDFVEPETIPWQVDGHKGDSFEDYCLSSSRDMPRTSRYQRARLFSLCVHYPP 792
PF ++ RYT+ TK +F + + + P A+++C F+L ++Y++D++ ++ W+ + P R++ +R + + A++A V Y+++G+PFD +C F W+ + G + + + WMT Q+T+ DV+ +V +++L+V L+ + KG+ Q + FS++ S + AYVPQ++S+ PL+AC++D ++P W D + SF D + + T + +FS H+ P
Sbjct: 740 PFELAERYTNMTKILFLTVFYLSIFPGALFLCSFALFVNYFTDRFSLMRTWK--RAPNYGPRMSEFSRTYFIPCAMVACAVMGSYFWSGFPFDNLCNRNTEIGQEFAGSWLVDPKGGGSNVTVSVATTDDAFDYCLQDFFRYGRDDESFPFISKFQKEQWMTDEQETVTDVWGWTSVG-VILLVVLKLLRGWWSSFWHLFKGSYEPCGQDQKINFSEVPS-----ISAYVPQVESNLFSYPLVACEVDEIDPNLFDW-TDPDRPFSFYDLTKDAEVLLKGTDVASKFSVFSQITHWSP 1028
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: W4G7D8_9STRA (RSN1_7TM domain-containing protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7D8_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 6.130e-9 Identity = 50/177 (28.25%), Postives = 93/177 (52.54%), Query Frame = 1
Query: 19 PPFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWP-FDRIC-RFEP-GWIECSQEGTGLIQAETQAWMTAPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMP 540
P F +++RY+ T+F L F+ +P+ + I LFS+ ++YW+DK+ F++ R+P P G++A A L AVL H +F ++ Y+ FD++ +F G + + G I A +T P + + + A+ LV ++VF Y S +R + + +K + +++P
Sbjct: 986 PEFDLASRYSVVINTIFITLMFSSGMPLMLLIGLFSMIITYWTDKFTFLRVVRSP--PQYDGKIAGAAGSLLPWAVLLHTLFGIWMYSNTQIFDKMTTQFSALGSLNAELQRGGRIVARA---ITMPSEVMFGLLVAIAAVALVRVVVFRYFGSALRSVFPICVRMMKKEKPPRNLP 1157
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: A0A485KVH9_9STRA (Aste57867_11946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVH9_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.690e-8 Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 1
Query: 19 PPFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWP-FDR----ICRFEPGWIECSQEGTGLIQAETQAWMTAPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGI 486
P F ++ RY+ T+F L F+ +P+ + I LFS+ ++YW+DK+ F++ R +PP G +AR A L AVL H +F ++ Y+ F R + + E + G G I A +T P + + + A+ LV L+VF Y S++R +
Sbjct: 989 PEFDLATRYSVVINTIFITLLFSSGMPLMLLIGLFSMIVTYWTDKFTFLRVVR--RPPEYDGEIARAAGNLLPWAVLLHSLFGIWMYSNTDIFQRMDVNVTALQSINDELQKHG-GRIVARA---ITMPSEVMFALLVAIAAFALVRLVVFRYFASVLRSV 1143
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: T0RK07_SAPDV (RSN1_7TM domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0RK07_SAPDV) HSP 1 Score: 64.7 bits (156), Expect = 4.800e-8 Identity = 48/180 (26.67%), Postives = 90/180 (50.00%), Query Frame = 1
Query: 19 PPFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWPFDRICRFEPGWIECSQEGTGLIQAETQAWMTAPQKTLVD---VFSAL--NVAWLVI-LLVFYYLQSIMRGISLVVKGAPRKLRSRQHMP 540
P F ++ RY+ T+F L F+ +P+ + I LFS+ ++YW+DK+ F++ R+P P GR+A + L A+L H +F + W + F+ E + +G L + + T + +F+A VA +V+ L+VF+YL +R + + ++ + +H+P
Sbjct: 942 PEFDLATRYSQIINTIFITLLFSSGMPLMLLIGLFSIIITYWTDKFTFLRVVRSP--PQYDGRIATVVGSMLPYAILLHMLFGI-----WMYSNTNIFQSPATELTLQGYNLNAVLDKGGKVVTRATAMPAAVLFAAAVAGVAVVVVRLVVFHYLGGALRSVFPMCTRMLKETKPPRHLP 1114
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: A0A6G0X577_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X577_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 6.180e-7 Identity = 33/96 (34.38%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 19 PPFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKWLFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWP-FDRI 303
P F +++RY+ T+F L F+ +P+ + I LFS+ ++YW+DK+ F++ R+P P G++A A L A+L H +F ++ Y+ FD I
Sbjct: 531 PEFDLASRYSVVMNTLFITLLFSSGMPLMLLIGLFSMIITYWTDKFTFLRVVRSP--PQYDGKIATAAGNLLPWAILLHALFGIWMYSNTQIFDAI 624
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Match: A0A418B970_9STRA (RSN1_7TM domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B970_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 9.610e-5 Identity = 48/196 (24.49%), Postives = 91/196 (46.43%), Query Frame = 1
Query: 19 PPFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDKW-------------------LFVKAWRTPQPPGNSGRVARLARRHLALAVLAHCVFALYYYAGWP-FDRICR--FEPGWIECSQEGTGLIQAETQAWMTAPQKTLVDVFSALNVAWLVILLVFYYLQSIMRGISLVVKGAPRKLRSRQHMP 540
P F +++RY+ T+F L F+ +P+ + I LFS+ ++YW+DK+ F++ R+P P G++A A L A+L H +F ++ Y+ FD++ G + E G I A +T P + + + A+ L+ ++VF Y S +R + + +K + +++P
Sbjct: 910 PEFDLASRYSVVINTIFITLLFSSGMPLMLLIGLFSMIITYWTDKFSTVTLPVLANEAMLTHLSLAFLRVVRSP--PQYDGKIAGAAGSLLPWAILLHTLFGIWMYSNTQIFDKMTTQLSALGSLNAELERGGRIVARA---ITMPSEVMFGLLVAIAALALLRVIVFRYFASALRSVFPICVRMLKKEKRPRNLP 1100 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12046.1748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12046.1748.1 >prot_Ecto-sp13_S_contig12046.1748.1 ID=prot_Ecto-sp13_S_contig12046.1748.1|Name=mRNA_Ecto-sp13_S_contig12046.1748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp MRVHPPPPFPVSNRYTDTTKTVFACLAFAPVLPIAVWICLFSLGLSYWSDback to top mRNA from alignment at Ecto-sp13_S_contig12046:46..3010+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12046.1748.1 ID=mRNA_Ecto-sp13_S_contig12046.1748.1|Name=mRNA_Ecto-sp13_S_contig12046.1748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2965bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12046:46..3010+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12046:46..3010+ >mRNA_Ecto-sp13_S_contig12046.1748.1 ID=mRNA_Ecto-sp13_S_contig12046.1748.1|Name=mRNA_Ecto-sp13_S_contig12046.1748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=825bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12046:46..3010+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |