prot_Ecto-sp13_S_contig662.17478.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig662.17478.1
Unique Nameprot_Ecto-sp13_S_contig662.17478.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 2.070e-135
Identity = 199/210 (94.76%), Postives = 204/210 (97.14%), Query Frame = 0
Query:    1 MLFGNVVVVVSALLATSTTFVASFVPSRSSTQLSRELSAWRRRSPSGTRRYSLTGRRWEITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210
            ML GNVVVVVSALLATSTTFV+S V SRS+TQLSRE SAWRRRSPSGTRRYS TGR+ E+TCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDF+FSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct:    1 MLGGNVVVVVSALLATSTTFVSSLVHSRSTTQLSRESSAWRRRSPSGTRRYSETGRKRELTCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.570e-86
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0
Query:   81 TNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210
            + QAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE
Sbjct:   60 SKQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 189          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.960e-58
Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 0
Query:   43 RSPSGTRRYSLTGRRWEITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210
            RSP+ T  + +T       CGLQ+T+ IRGK+S  E++ N AY EY KRLRPVL L T WHKTD +LEAA+ K+   V+CLDEGG+Q++S   +D L+ +LEEGG+RL+ V+GGAEGLPP L+          SLS +TFTH WAR LLAEQIYRASEI+RGS YHKE
Sbjct:   55 RSPTFTHAFRVTP-----ACGLQVTIHIRGKRSGGEEFLNDAYLEYTKRLRPVLGLTTVWHKTDSELEAAIAKEKAPVICLDEGGKQLSSMELADILYKRLEEGGARLSLVIGGAEGLPPRLRASKE----LWSLSRLTFTHQWARVLLAEQIYRASEIKRGSGYHKE 213          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A835ZC53_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC53_9STRA)

HSP 1 Score: 174 bits (440), Expect = 7.540e-52
Identity = 86/156 (55.13%), Postives = 113/156 (72.44%), Query Frame = 0
Query:   54 TGRRWEITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            T  R   TCG ++T+ IRGK+  E  +    +DEY KRLRP L L T WHKTD D+EAAV ++   V+C+DE G+Q++S +FS++L+ KLE GGSRL FV+GGAEGLP  +K +  +   K+SLS M  TH WA ALL+EQIYRA+EIR+G+KYHK
Sbjct:   20 TAYRLTPTCGPRVTIHIRGKE--ERGFLADGHDEYVKRLRPTLQLTTVWHKTDSDMEAAVFREQCPVICMDERGKQLDSTSFSEYLYKKLEIGGSRLAFVIGGAEGLPASMKAEKSYD--KMSLSKMVLTHTWAWALLSEQIYRATEIRKGTKYHK 171          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.880e-51
Identity = 90/166 (54.22%), Postives = 114/166 (68.67%), Query Frame = 0
Query:   44 SPSGTRRYSLTGRRWEITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            S S  R  S   +R  +TCGL++T+ IRGKKS  ED+ +   DEY KRLR  L L T+W+K D  L   V+K+ GV+V LDE G+ +NS  FS  ++  LE+GGSRL FV+GGAEGLPP LK +  H    +SLS MTFTH  AR +LAEQIYRA+EIR+G+ YHK
Sbjct:   29 SSSPERIISRAPKRGFMTCGLEVTIHIRGKKSGGEDWISTGIDEYQKRLRSTLKLQTKWYKDDSALIQGVKKEKGVIVTLDERGKLLNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAKH---LISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A7S2R9V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V3_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.420e-40
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 0
Query:   78 EDYTNQAYDEYAKRLRPV-LALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            + +    Y EY KRL+P  + L T WH+TD  L AAV      V+CLD  G Q +S  FSD LFSKLE+GGSRL FV+GGAEGLPP LK+     G  +SLS +TFTH  AR LLAEQ+YRA+EIRRGS YHK
Sbjct:    5 DQWIEDGYAEYEKRLKPQQVELVTVWHRTDQQLLAAVEGSKAPVICLDPTGAQWSSERFSDMLFSKLEDGGSRLMFVIGGAEGLPPELKRS----GNLMSLSKLTFTHQMARMLLAEQVYRAAEIRRGSGYHK 133          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A7S2F628_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F628_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.500e-36
Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = 0
Query:   60 ITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPV-LALDTQWHKTDDDLEAAVR---KDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQK--PPHGGAK-LSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            IT  LQ+T+ I+G+K    D+   A+++YA RL P  + L T WHK++D L  A++   ++P   +CLD  G+Q++S  F   L+ +L EGGSRL FV+GGAEGLP  +++K  P     + +SLSSMTFTH  AR +LAEQ+YRA+EIR+G+ YHK
Sbjct:   50 ITAALQVTLHIQGRKI--NDHNEVAFEQYAMRLTPHRIQLKTVWHKSNDQLTKAIKATSREP--CICLDVCGQQLDSGGFEQLLYQRLVEGGSRLAFVIGGAEGLPDEVREKKDPKLQHVEFISLSSMTFTHQMARVILAEQVYRAAEIRKGTGYHK 202          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: UPI001BC8D685 (23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH n=1 Tax=Parachlamydia sp. AcF125 TaxID=2795736 RepID=UPI001BC8D685)

HSP 1 Score: 130 bits (326), Expect = 4.760e-35
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 0
Query:   64 LQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            L+I +   GK   +E + N A +EY KRL+  + ++  W K D  L A V ++P +VVCLD  G+ ++S  FS FL  KLEEGGSRLTFV+GGAEGLP  LKQ        +SLS +TFTH  AR +L EQIYRA EI +GS+YHK
Sbjct:    2 LKIKILSVGKT--KETWLNTAIEEYQKRLQGQVEMEWVWAKDDPQLMALVSREP-LVVCLDPQGKMLSSEQFSSFLMRKLEEGGSRLTFVIGGAEGLPLFLKQNKE----AISLSLLTFTHQIARVVLIEQIYRALEIAKGSRYHK 140          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A7W1YWG3_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YWG3_9BACT)

HSP 1 Score: 129 bits (323), Expect = 1.310e-34
Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 0
Query:   66 ITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDTQWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            I ++I      +E++   A +EY KRL P+  L  QW K D  L     K+P +++CLD  G  ++S  FS FL  KL+ GGSRLTF++GGA+GLP  LK  P      LSLS MTFTH   R +L EQIYRA EI RGS+YHK
Sbjct:    2 IKIKIISVGKNKEEWLETALNEYVKRLTPIATLSFQWAKDDQHLLDIALKEP-LLICLDPQGSSLSSEEFSSFLHQKLQLGGSRLTFIIGGADGLPTTLKSSP-----LLSLSKMTFTHQITRLILVEQIYRAFEIARGSQYHK 139          
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Match: A0A7S2XIV0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIV0_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.570e-34
Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = 0
Query:   57 RWEITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPV-LALDTQWHKTDDDLEAAVRKDPG---VVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQ---KPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHK 209
            R  +  G+++ +RI G+K+  E +   AY  Y  RLRP  + ++T WHK D +L   V+ D      VV LD  G+   S  FS+ +++ L++GGSRL+FV+GGAEGLP  L+     P       SLS++TFTH +AR LL EQIYRASEIR+GS YHK
Sbjct:   52 RSSLCMGMEVRIRIVGRKNGSEKWLEDAYSMYETRLRPSNIDVETIWHKNDQELIKGVKGDSDKGHTVVLLDPRGKPRTSEQFSENMYTWLDQGGSRLSFVIGGAEGLPYELRDGSYNPKKSLILFSLSALTFTHQFARTLLMEQIYRASEIRKGSGYHK 211          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig662.17478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEB2_9PHAE2.070e-13594.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIP1_ECTSI1.570e-8698.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TG35_9STRA2.960e-5857.74Ribosomal rna large subunit methyltransferase h n=... [more]
A0A835ZC53_9STRA7.540e-5255.13Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A7S2UUR8_9STRA3.880e-5154.22Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2R9V3_9STRA1.420e-4057.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2F628_9STRA4.500e-3647.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001BC8D6854.760e-3551.3723S rRNA (pseudouridine(1915)-N(3))-methyltransfer... [more]
A0A7W1YWG3_9BACT1.310e-3448.61Ribosomal RNA large subunit methyltransferase H n=... [more]
A0A7S2XIV0_9STRA2.570e-3445.63Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 65..210
e-value: 1.3E-34
score: 121.1
IPR003742RNA methyltransferase RlmHPFAMPF02590SPOUT_MTasecoord: 66..208
e-value: 1.9E-29
score: 102.6
IPR003742RNA methyltransferase RlmHPANTHERPTHR33603FAMILY NOT NAMEDcoord: 98..209
IPR003742RNA methyltransferase RlmHHAMAPMF_0065823SrRNA_methyltr_Hcoord: 64..209
score: 20.975
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.691
NoneNo IPR availableTMHMMTMhelixcoord: 2..24
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 70..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig662contigEcto-sp13_S_contig662:20134..21587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig662.17478.1mRNA_Ecto-sp13_S_contig662.17478.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig662 20085..21970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig662.17478.1 ID=prot_Ecto-sp13_S_contig662.17478.1|Name=mRNA_Ecto-sp13_S_contig662.17478.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
MLFGNVVVVVSALLATSTTFVASFVPSRSSTQLSRELSAWRRRSPSGTRR
YSLTGRRWEITCGLQITVRIRGKKSREEDYTNQAYDEYAKRLRPVLALDT
QWHKTDDDLEAAVRKDPGVVVCLDEGGRQMNSPAFSDFLFSKLEEGGSRL
TFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASE
IRRGSKYHKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029026tRNA_m1G_MTases_N
IPR003742RlmH-like
IPR029028Alpha/beta_knot_MTases