mRNA_Ecto-sp13_S_contig12045.1747.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12045.1747.1
Unique NamemRNA_Ecto-sp13_S_contig12045.1747.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: D7FHD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD1_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 6.080e-148
Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 1
Query:    1 SFAPQGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELPGDVRRARRQ 693
            S+   GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERI+RHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECV  +EAELAKRELPGDVRRARRQ
Sbjct:  228 SWLAAGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIIRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVTIVEAELAKRELPGDVRRARRQ 458          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A835YLP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP7_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.090e-72
Identity = 120/229 (52.40%), Postives = 158/229 (69.00%), Query Frame = 1
Query:    1 SFAPQGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELPGDVRRAR 687
            ++A  G  +  AE  A     +DPLQ  +P T+G+   DR++L GAL ES+ R+I P Y+ +I+RHEAGHFL+AYLLG  +  CLLDP+ +   + G QGGTVFADP  ++ +  G +TK+SIDRFSIVLM GIAAEA+ YG +EGG++DE  +I ILS+I PPF  E I+ QA WAA QA LL++EH+ AY+VLV ALE G+ +GEC+M IE  L K   P  V   R
Sbjct:  164 TWAYAGAALCLAEVAAAQYFNIDPLQVALPATIGVFALDRIVLKGALFESIARIINPTYKAKIIRHEAGHFLLAYLLGLGISGCLLDPWQVRKFVRG-QGGTVFADPTFARGLQSGSITKTSIDRFSIVLMAGIAAEAVVYGRAEGGASDEAGLISILSSIQPPFTYEMIRQQARWAAVQAALLLKEHQAAYDVLVAALEKGSSVGECIMAIEGSLRKMPSPTPVEVRR 391          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S2C9N4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9N4_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.580e-64
Identity = 106/229 (46.29%), Postives = 156/229 (68.12%), Query Frame = 1
Query:   16 GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF-VLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIA-PPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELPGDVRRARRQV 696
            GVG+   E+    L+G+DPL+T++P TLGLI ADR L+NGA  E++ R + P YR +++RHEA HFLVAYLLGCP+++C+L  +  +       Q GTVF D VL  QMA G + KS++DR+ +V+M GIA EA+ YG +EGG++DE  ++  L +I+ PP+  ++I+ QA W   Q+V+L++EH+ +YE LV ALE G  LG C+  +EA L +  LP   R+  R++
Sbjct:   55 GVGLAIFEFNVAPLIGIDPLKTLLPLTLGLIIADRFLVNGAGFETIYRALFPQYRTKVIRHEAAHFLVAYLLGCPIESCILSAWDAISEPRFDGQAGTVFFDRVLGDQMASGSVKKSTVDRYCMVVMAGIAGEALEYGKAEGGASDEQAVVQFLGSISSPPWGIDRIRDQARWGVVQSVMLLKEHEASYEALVGALERGEPLGACIGALEAALPEGTLPAVERQRAREL 283          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S1EHK9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHK9_HEMAN)

HSP 1 Score: 206 bits (524), Expect = 1.350e-61
Identity = 104/225 (46.22%), Postives = 150/225 (66.67%), Query Frame = 1
Query:   16 GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELPGDVRRARR 690
            G+ V   EYL    +GLDP+  VIP T     ADR+L++GA+ ES+ RL+ P Y+ ++V+HEAGHFL+AYLLGCP+Q   L  +   S     Q GT+F D  LS QM + K+T++SIDR+SIV+M GIAAEA+ Y  +EGG++DE V++  L  + PP+D +++ +QA WA  Q++LL+ +H+E+Y+ L  A+E G  LGEC+  IE  L +  LP +V    R
Sbjct:  125 GLAVCATEYLVSQQLGLDPM-VVIPLTAAAFLADRVLVSGAVLESIYRLLFPKYKSKVVQHEAGHFLIAYLLGCPIQGFFLSAWDASSAGLQGQAGTIFFDNDLSSQMGNNKVTRTSIDRYSIVVMAGIAAEAVVYDQAEGGASDEEVLVSFLVGLIPPWDEKRVLNQARWAVLQSILLMSQHRESYDRLAKAMEEGRPLGECIKAIEDALPEA-LPANVTAEAR 347          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S0VT99_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VT99_9CRYP)

HSP 1 Score: 204 bits (520), Expect = 3.780e-61
Identity = 104/225 (46.22%), Postives = 150/225 (66.67%), Query Frame = 1
Query:   16 GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELPGDVRRARR 690
            G+ V  AEYL    +GLDP+  VIP T     ADR+L++GA+ ES+ R + P Y++++V+HEAGHFL+AYLLGCP+Q   L  +   S     Q GT+F D  LS QM + K+T++SIDR+SIV+M GIAAEA+ Y  +EGG++DE V++  L  + PP+D +++ +QA WA  Q++LL+ +++E+Y+ L  A+E G  LGECV  IE  L +  LP  V    R
Sbjct:    6 GLAVCAAEYLVSKQLGLDPMA-VIPLTAAAFLADRILVSGAVLESIYRFLFPQYKQKVVQHEAGHFLIAYLLGCPIQGFFLSAWDASSAGLQGQAGTIFFDNDLSSQMGNNKVTRTSIDRYSIVVMAGIAAEAVVYDQAEGGASDEEVLVSFLVGLIPPWDEKRVLNQARWAVLQSILLMSQYRESYDRLAKAMEEGRPLGECVKAIEDALPEA-LPSTVTAEAR 228          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S4NSX5_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NSX5_GUITH)

HSP 1 Score: 207 bits (528), Expect = 2.240e-60
Identity = 105/227 (46.26%), Postives = 153/227 (67.40%), Query Frame = 1
Query:   16 GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF-VLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAK-RELPGDVRRARR 690
            G+G+   EY   +  GLDPL+TVIP+T  L   DRLL +GA  ES  R + P Y+E++++HEAGHFL+AYLLGCP+Q   L  +    +G+ G Q GTVF D  LS Q+   ++T+++IDR++IVLMGGIAAEA+NY  +EGG++DE  ++  L  + PP+  +Q+ +QA WA T+A+LL++EH+ AY+ L +A+  G  LG C+  +E  L +  ELP + R   R
Sbjct:  189 GLGLCTVEYFLALNAGLDPLRTVIPFTAFLFVVDRLLTSGAAFESAYRFLFPKYKEKVIKHEAGHFLLAYLLGCPIQGFFLSAWDATRAGIRG-QAGTVFFDNDLSTQLNANRVTRTAIDRYTIVLMGGIAAEAMNYEQAEGGASDESALVSFLVGLLPPWQPQQVLNQARWAVTEAILLLREHRAAYDSLCDAMARGESLGTCISVLENALMEFEELPSEKRARER 414          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S2WUW6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUW6_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.330e-60
Identity = 107/232 (46.12%), Postives = 146/232 (62.93%), Query Frame = 1
Query:    4 FAPQGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF-VLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGA-ELGECVMFIEAELAKR-ELPGDVRRARR 690
            +A  G+     E+      GLDP+ TV P T+G    DRL+  GAL E+  R + P YRE+++RHEA HFLVAYLLGCPV++C++  F  +       Q GT+F DP    QMA G + +SSIDRF++++M GIAAEA  YG +EGG +DE  +I +L +  PP++ ++I+ QA W   QA LL++EH+ AYE LV  L +   ELG CV  IE  L  R +LPG  RR +R
Sbjct:  228 WAAAGLAFCLTEFAVAQAAGLDPVNTVFPATIGFFLLDRLVFQGALFETAYRAVAPQYREKVIRHEAAHFLVAYLLGCPVESCIISAFDAMSESRFDGQAGTIFFDPEFGDQMASGNVPRSSIDRFTVIVMAGIAAEARKYGKAEGGLSDESTIISLLVSTNPPWNLDRIQQQARWGVVQASLLLEEHEAAYEALVEKLTNDEFELGACVAAIEGSLPSRNQLPGIQRRTQR 459          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S0HPT9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HPT9_9CRYP)

HSP 1 Score: 206 bits (523), Expect = 4.470e-60
Identity = 104/227 (45.81%), Postives = 154/227 (67.84%), Query Frame = 1
Query:   16 GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF-VLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAK-RELPGDVRRARR 690
            G+G+   EYL     GLDPL+TVIP+T  L   DR+L +GA  ES+ R + P Y+E++++HEAGHFL+AYLLGCP+Q   L  +    +G+ G Q GTVF D  LS Q+   ++T+++IDR++IVLMGGIAAEA+NY  +EGG++DE  ++  L  + PP+  +Q+ +QA WA T+A+LL++EH+ AY+ L +A+  G  LG C+  ++  L +  ELP + R   R
Sbjct:  140 GLGLCTVEYLLAANAGLDPLRTVIPFTAFLFVLDRVLTSGAAFESVYRFLFPKYKEKVIKHEAGHFLLAYLLGCPIQGFFLSAWDATRAGIRG-QAGTVFFDNDLSSQLNSNRVTRTAIDRYTIVLMGGIAAEAMNYEQAEGGASDESALVSFLVGLLPPWQPQQVLNQARWAVTEAILLLREHRAAYDSLCDAMTRGESLGTCISVLDKALMEFDELPVEKRARER 365          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S0XWC1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWC1_HEMAN)

HSP 1 Score: 206 bits (524), Expect = 4.690e-60
Identity = 104/225 (46.22%), Postives = 150/225 (66.67%), Query Frame = 1
Query:   16 GVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELPGDVRRARR 690
            G+ V   EYL    +GLDP+  VIP T     ADR+L++GA+ ES+ RL+ P Y+ ++V+HEAGHFL+AYLLGCP+Q   L  +   S     Q GT+F D  LS QM + K+T++SIDR+SIV+M GIAAEA+ Y  +EGG++DE V++  L  + PP+D +++ +QA WA  Q++LL+ +H+E+Y+ L  A+E G  LGEC+  IE  L +  LP +V    R
Sbjct:  123 GLAVCATEYLVSQQLGLDPM-VVIPLTAAAFLADRVLVSGAVLESIYRLLFPKYKSKVVQHEAGHFLIAYLLGCPIQGFFLSAWDASSAGLQGQAGTIFFDNDLSSQMGNNKVTRTSIDRYSIVVMAGIAAEAVVYDQAEGGASDEEVLVSFLVGLIPPWDEKRVLNQARWAVLQSILLMSQHRESYDRLAKAMEEGRPLGECIKAIEDALPEA-LPANVTAEAR 345          
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Match: A0A7S0HJE3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HJE3_9EUKA)

HSP 1 Score: 189 bits (481), Expect = 2.140e-54
Identity = 112/247 (45.34%), Postives = 152/247 (61.54%), Query Frame = 1
Query:    1 SFAPQGVGVFGAEYLAGIL--MGLDPLQTVIPWTL--------GLIFADRLLLNGALSESLTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPF--VLGSGLTGAQGGTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSADEGVMIGILSTI--APPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALESGAELGECVMFIEAELAKRELP---GDVRRARR 690
            +FAP G G  G   +AG L  + L    +   W L        G +  DRLLL GA  E++T+L+ PAY   +++HEAGHFLVAYLLGCPV+A LLD F  +          GTVF DP L   M  G+L +S++DR+S+V++ GIAAEA   G +EGG ADE  ++ +LS++     +D  +I++QA W A+QAVLL++EH+ A+  L  ALE GA +GEC++ IEA LA  ELP   G   R RR
Sbjct:  195 AFAP-GKGNGGGTLVAGALSALALTSAASSFGWDLQAPFQAAGGALLLDRLLLRGAAGEAVTKLVQPAYARTVLQHEAGHFLVAYLLGCPVEAVLLDGFQAMRDGRFAAGTAGTVFFDPELGAAMKRGELPRSAVDRYSVVVLAGIAAEAQQNGRAEGGQADEAALVQLLSSLDGGKSWDIPRIQNQARWGASQAVLLLREHEAAFAALCEALERGASVGECMVAIEAALATAELPTAGGGAPRDRR 440          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12045.1747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHD1_ECTSI6.080e-14896.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLP7_9STRA2.090e-7252.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C9N4_9STRA2.580e-6446.29Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S1EHK9_HEMAN1.350e-6146.22Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0VT99_9CRYP3.780e-6146.22Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4NSX5_GUITH2.240e-6046.26Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S2WUW6_9STRA2.330e-6046.12Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0HPT9_9CRYP4.470e-6045.81Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0XWC1_HEMAN4.690e-6046.22Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0HJE3_9EUKA2.140e-5445.34Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12045contigEcto-sp13_S_contig12045:359..3646 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score437.2
Seed ortholog evalue5e-120
Seed eggNOG ortholog2880.D7FHD1
Model size717
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs28IYK@1,2QRAA@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-03_003930.1
Cds size717
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462639.966903-CDS-Ecto-sp13_S_contig12045:358..4581681462639.966903-CDS-Ecto-sp13_S_contig12045:358..458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12045 359..458 +
1681462639.9767582-CDS-Ecto-sp13_S_contig12045:1088..12581681462639.9767582-CDS-Ecto-sp13_S_contig12045:1088..1258Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12045 1089..1258 +
1681462639.9851146-CDS-Ecto-sp13_S_contig12045:1643..18081681462639.9851146-CDS-Ecto-sp13_S_contig12045:1643..1808Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12045 1644..1808 +
1681462640.0030766-CDS-Ecto-sp13_S_contig12045:2668..28001681462640.0030766-CDS-Ecto-sp13_S_contig12045:2668..2800Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12045 2669..2800 +
1681462640.0157413-CDS-Ecto-sp13_S_contig12045:3496..36461681462640.0157413-CDS-Ecto-sp13_S_contig12045:3496..3646Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12045 3497..3646 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12045.1747.1prot_Ecto-sp13_S_contig12045.1747.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12045 359..3646 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12045.1747.1

>prot_Ecto-sp13_S_contig12045.1747.1 ID=prot_Ecto-sp13_S_contig12045.1747.1|Name=mRNA_Ecto-sp13_S_contig12045.1747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp
SFAPQGVGVFGAEYLAGILMGLDPLQTVIPWTLGLIFADRLLLNGALSES
LTRLIVPAYRERIVRHEAGHFLVAYLLGCPVQACLLDPFVLGSGLTGAQG
GTVFADPVLSKQMADGKLTKSSIDRFSIVLMGGIAAEAINYGNSEGGSAD
EGVMIGILSTIAPPFDREQIKSQALWAATQAVLLIQEHKEAYEVLVNALE
SGAELGECVMFIEAELAKRELPGDVRRARRQVCVCTLA*
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mRNA from alignment at Ecto-sp13_S_contig12045:359..3646+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12045.1747.1 ID=mRNA_Ecto-sp13_S_contig12045.1747.1|Name=mRNA_Ecto-sp13_S_contig12045.1747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3288bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12045:359..3646+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCTTTTGCTCCGCAGGGGGTCGGGGTGTTTGGAGCGGAGTACCTGGCGGG CATTTTGATGGGACTGGACCCTTTGCAAACCGTCATCCCCTGGACGTTAG GTGAGACCGATCATCTAAGCACTAGACAAGGATGGCGATACCGCAGGAGA GATTTCAGGAACTGTACGTTGGGGAAAGGTGGATGGAGGTCGCTGGTTCT GCGATGCCGGTGTTTACGAGACGTGAACTTCGACAAACGAGTTATTTTGG TTTGCAAGTGGTACGGTAGATTGGGCCCAACCCGATTTCTAGTTCGCTAA TAACCCTAAGTCGAGGTCTAGTTCTAGTTCGCTCCTCTTCTCACGGTTAG TTGGTGGTGGGCTTGAGGGACGATCGGGGTTGGAGTTGCAGGGTTCGAGG CCTTTCAGCAGCTACAACGACGACGAGGCAGCGTGCTCCTCTGATCTTGA GTACACATGTTTCATCCTTGCAGGGCAGCATCGAGCACGCGGGTGCATCC CTGTCACAACTCGCCCGAATGATTGGGCTCACGTTTCGCGATATTGCTGG GCTGGGGTGGTCAGAAACAGAGCGCCGACCAGCTGTCAACGGCCGATCCA CGTGCACTCCTTCCCACCCATGATTCGTCGCCGCCGTTGTCGTCGACGCT GTTGGCTGTCCTGCTGCTGTCGCTCTCTGCCGTGGCGAACCAGCATTTCT CATCGCACCCCGCTTTTGCCCTTTCGTCAGGTCTTATCTTCGCGGACAGG CTGCTGCTGAACGGGGCCTTATCGGAGTCTCTGACGCGCTTGATCGTGCC CGCCTACCGGGAGAGGATAGTCCGCCACGAGGCTGGCCACTTCCTTGTGG CCTACCTCCTCGGCTGCCCCGTGCAGGCGTGCCTGCTTGATCCGTTCGTT GTGAGTTGGTGCTGCTGCTGCTGCTATCGTGTATTGTTGGCGACGGTTTT GCCGCTGTTATCGTGCTCTTGTTGATGATGATGATGATGTTGTTGCTGCT GCTGTTGTTTTTGTTGCGGTTGGTGTTGTTCATGTTCCTGTTGGCGGTGG TGGTCGTGGTGATGATGATAATGCTGACGATGATGATGTTGCTGTTGGTG GTGTTCTTGTTCTTGGTGTTGCTGGTGTTGCTGCTGTTGGTGTTGCGATT ACTGCTGCTGTTGTTGTTGAAGGTAATGATGTTGCTGATGCCGTTGCTGA CGGTGTACTTAGTGTTGCTATTTGTTTTTTCCTCCTGTTATCATTGGTCT TCTGCGCCGTAATCTCTCTGCTTCTGGTTGACCAGTTGGGGAGCGGCCTG ACCGGCGCTCAGGGGGGCACGGTCTTCGCAGACCCCGTCCTGTCCAAGCA GATGGCGGACGGAAAGCTCACCAAGTCGTCGATCGACAGGTTCTCCATCG TGCTCATGGGAGGCATTGCGGCCGAGGCGATCAACTACGGCAACTCGGAG GTGCAGAAAACATGCTAAAGAAACACATTTTTGCCGCTGTTTTTTTTGTT TTTGTCGGGTGTACTCCAGTTCGGCGGCGTTTTGAAATAACCTAGGTGTG GTGAAGGAATGGAGTACCGTATACGACACATGATAATGCACCTACGGACC GATCTTTAGAGCTCGATTTATCAACTGCAGAAAGAGTCGCAGCGCCGAAA ACGGCGGCTTTTAAGCCGTCTGATCGAGAGCTAACCCTAACCCCATCCTT TGGTAGGGGCATTCTCTTCGTCGTGAAGTAGTGGAACTTTGAGAACTGGT CCAGAGGGTGTGTTATCTTGTGTTGTGTACGGTAGACCAGATTGTGTTTC GTGTCTCGTGTTTTTACGCTTGTGGTGTTCGTCGCTGGCCGCGTGCCTCC CTCTCCCTCAAGGCGGAGATAAGTTGAGACTGGGGAGGCCGGTGCTCGGT AATATGTAGCAGTCCCCTTTCCAGGTGTTGTTTTCGTTAACACTTGTTGA AGAAAGATGAGCTCTATTTTGTTGAGCCAATCGGCGGCCGACCGCTTCCA GCTGATGGATGGTAAAGAAGGCGTTGTGAGGCTGTTTTTGTATATGCGTG TGTTCGAGAGCTAGAAGTCGTGTTTGCTTGTTGGTTCCGTGTGCTGGCGC AGCTGCAACGTTGACGCGTCGACCGTGATCTCTGCCGTCGCGCCCGACAT CACAGCATGAACAACAGCAGTAGCACGTCACAGCAGTACCAAATAGCACC CGCTTCCATCCTCGCACGAACGTGTTGCAACATGTGTGTTGTCTCTCTCC CGCGTGTGGTTCCAACAACAACGACGACGACGACGGCGATAACGACCACC ACACCCGCAGGGAGGGTCAGCTGACGAGGGGGTCATGATCGGCATCTTGA GCACGATCGCGCCGCCGTTCGACCGGGAGCAGATCAAGTCTCAGGCGCTC TGGGCGGCCACGCAGGCGGTGCTTCTTATCCAGGAGCACAAGGTGCGAAA GCGCGAAAGCGTGTGGATGCATTCATGGGGCAGTTTGTGGCGATGAGTTG TTCCATGGCAGATGAATGATCCCACATCCACCTCTTCGTCTTGGAAGATG AGCTTTTGGTGAGCTGGCCGTGACCACGTCTACGCTGATTGAGGGTCAAC CTGCGGAGCATTTTCGGTTTTTACGTTGTTGTTTTTATTCCGGGGTGCAA TCATGAAGCATTCCATAGGCTTGTTAGAAATTTGCATGGCATCAACAAAG AAAGGATGTACCCGTTCTAGATCGTAACGAGCTAGGGATGCATTGGTGAC CGATCGACCAGCTTGTGTACGACCTAACACAGGAGTTCAGGTTTTGCTGG CATCATACGTGCCCATCGGACCGCCACGCAGGATTTTAAGAGTATCTTGA AAAAAAATGAAGGAGCACGCAGACCCTATCCCTATCCCTAACCCTAACCC CAAGGCACGGATTCAATACTTTGTCCCATATGTTTGCTTTATCAGTTTTG CTTCGTTGACAACTGTGCCCATCCCTCCCTTTGCAACAAATAAGCTTGTG TAGGCTAGCCTAATACAGGTGTGCCAACACCGTCCTTGTCCGTCCCTCTC GTCCTTGTTTCGTTGTTCTTCTTCTTCCTGTGATTGGTCGTTTTGTTGTT CTTCTTCCGCAAATGGAACAAACGAACGTCTGATGCAGGAAGCGTACGAG GTGCTGGTGAACGCCCTCGAGAGCGGCGCGGAGCTCGGCGAGTGCGTTAT GTTCATCGAAGCGGAGCTCGCGAAGAGGGAGCTGCCGGGAGACGTTAGGC GCGCTCGCCGACAGGTATGCGTATGTACCCTTGCCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12045:359..3646+

>mRNA_Ecto-sp13_S_contig12045.1747.1 ID=mRNA_Ecto-sp13_S_contig12045.1747.1|Name=mRNA_Ecto-sp13_S_contig12045.1747.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12045:359..3646+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCTTTTGCTCCGCAGGGGGTCGGGGTGTTTGGAGCGGAGTACCTGGCGGG
CATTTTGATGGGACTGGACCCTTTGCAAACCGTCATCCCCTGGACGTTAG
GTCTTATCTTCGCGGACAGGCTGCTGCTGAACGGGGCCTTATCGGAGTCT
CTGACGCGCTTGATCGTGCCCGCCTACCGGGAGAGGATAGTCCGCCACGA
GGCTGGCCACTTCCTTGTGGCCTACCTCCTCGGCTGCCCCGTGCAGGCGT
GCCTGCTTGATCCGTTCGTTTTGGGGAGCGGCCTGACCGGCGCTCAGGGG
GGCACGGTCTTCGCAGACCCCGTCCTGTCCAAGCAGATGGCGGACGGAAA
GCTCACCAAGTCGTCGATCGACAGGTTCTCCATCGTGCTCATGGGAGGCA
TTGCGGCCGAGGCGATCAACTACGGCAACTCGGAGGGAGGGTCAGCTGAC
GAGGGGGTCATGATCGGCATCTTGAGCACGATCGCGCCGCCGTTCGACCG
GGAGCAGATCAAGTCTCAGGCGCTCTGGGCGGCCACGCAGGCGGTGCTTC
TTATCCAGGAGCACAAGGAAGCGTACGAGGTGCTGGTGAACGCCCTCGAG
AGCGGCGCGGAGCTCGGCGAGTGCGTTATGTTCATCGAAGCGGAGCTCGC
GAAGAGGGAGCTGCCGGGAGACGTTAGGCGCGCTCGCCGACAGGTATGCG
TATGTACCCTTGCCTAG
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