prot_Ecto-sp13_S_contig6616.17468.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: D8LMP4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP4_ECTSI) HSP 1 Score: 238 bits (607), Expect = 6.390e-76 Identity = 120/135 (88.89%), Postives = 123/135 (91.11%), Query Frame = 0
Query: 1 MVAGGECPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVKVRSITKTLSLREIEQFNVRTPRDPNQVRTKAQMKRARAKRFNCRKP---------IPFTVTKAVRVKLRTQTKEMNRLLADAPHPQ 126
MVAGGECPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRV+VRSITKTLSLREIEQFNVRTP DP+QVRTKAQ+KRARAKRF CRKP IPFTVTKAVRVKLRTQ KEMNRLLADAPHPQ
Sbjct: 35 MVAGGECPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVEVRSITKTLSLREIEQFNVRTPHDPSQVRTKAQIKRARAKRFKCRKPASVVFDDIYIPFTVTKAVRVKLRTQMKEMNRLLADAPHPQ 169
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: D8LMP5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP5_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.810e-18 Identity = 59/126 (46.83%), Postives = 76/126 (60.32%), Query Frame = 0
Query: 7 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTE-SACPVCRVKVRSITKTLSLREIEQFNVRTPRDPNQVRTKAQMKRARAKRFNCRK-PIPFTVTKAVRVKLRTQTKEMNRLLADAPHPQAEMG 130
CPICQ LLP+E RGI++C HVFC KC+ +W K + ++CP CR KV I KTLSL E + N R P TKAQ+KR + K + P P T+ +RV + ++E R A APHPQA G
Sbjct: 57 CPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNAN--RKPL---TKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKV-SREQIRQNAMAPHPQAPGG 176
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 4.510e-18 Identity = 55/129 (42.64%), Postives = 72/129 (55.81%), Query Frame = 0
Query: 7 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVKVRSITKTLSLREIEQFNVRTPRDPNQVR-----TKAQMKRARAKRFNCRKPIPFTVTKAVRVKLRTQTKEMNRLLADAPHPQAEMG 130
C IC LP+ ERG+L C HVFCF CIH+WTK S CP CRV+++ ITKTLS + + T + R + Q+KRAR + + P VTK VRV+ ++ + A APHPQA G
Sbjct: 176 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRGMKKKPRKQLKRARHRDSRAKNPASGFVTKTVRVRPKSLKMTPAQQRA-APHPQARGG 303
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: A0A6H5JQU9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU9_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.820e-16 Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = 0
Query: 4 GGECPICQGLLPDEERGILRCNHVFCFKCIHKWTKTE-SACPVCRVKVRSITKTLSLREIEQFNVRTPRDPNQVRTKAQMKRARAK-------------RFNCRKPIPFTVTKAVRVKLRTQTKEMNRLLADAPHPQAEMG 130
G CPICQ LLP+E RGIL+C HVFC KC+ +W K + ++CP CR +V I +TLS E + N R P + KAQ+KRA+ K + + P T+ +RV+ + ++E R A APHPQA G
Sbjct: 78 GDRCPICQDLLPEENRGILKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSSAEALEKNA--DRKPPR---KAQLKRAKRKSAVGKPSPGDRYSESDVLQQKPDITTEKIRVRKKV-SREQIRQNATAPHPQAPGG 212
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 1.220e-14 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
Query: 7 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVKVRSITKTLS 58
C IC LPD ERG+L C HVFCF CIH+WTK S CP CRV+++ ITKTLS
Sbjct: 80 CAICCDKLPDLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLS 131
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: A0A6H5JR52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR52_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 8.770e-14 Identity = 45/81 (55.56%), Postives = 49/81 (60.49%), Query Frame = 0
Query: 1 MVAGGECPICQGLLPDEERGILRC------------NHVFCFKCIHKWTKTESACPVCRVKVRSITKTLSLREIEQFNVRT 69
MVAGGEC ICQGLLPDEERGILRC + S+C +KVRSITKTLSLREIEQFNVR+
Sbjct: 40 MVAGGECVICQGLLPDEERGILRCLSAVAELNIAAIAEFLLLLVVFSCCSGSSSC----LKVRSITKTLSLREIEQFNVRS 116
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: UPI000B932F00 (pre-mRNA-splicing factor CWC24-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B932F00) HSP 1 Score: 58.9 bits (141), Expect = 9.340e-8 Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0
Query: 7 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCR 47
C IC + E+ +L+CNHVFCFKCIH W +T +CP+CR
Sbjct: 43 CSICFDIF--EKPSVLKCNHVFCFKCIHNWMRTNKSCPICR 81
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: A0A1R2AZW0_9CILI (RING-type domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AZW0_9CILI) HSP 1 Score: 50.8 bits (120), Expect = 5.360e-5 Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0
Query: 7 CPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVKVRSITKTLSLREIEQFN--VRTPRDPNQVR 77
C IC + + + I C+H+FCFKCI KW+ E++CP+C+ + IT+ +E ++ ++ R NQ R
Sbjct: 12 CGICFDEIEFQGK-INSCSHLFCFKCIKKWSDNENSCPICKSRFEKITRIARRKEYKKSRSIIKLVRTKNQER 83
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Match: A0A2E5JAS0_9FLAO (RING-type domain-containing protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E5JAS0_9FLAO) HSP 1 Score: 51.2 bits (121), Expect = 7.480e-5 Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 0
Query: 6 ECPICQGLLPDEERGILRCNHVFCFKCIHKWTKTESACPVCRVKVRSIT 54
EC IC + ++ + + C+H FC KCI +WTKT + CP+CR + IT
Sbjct: 3 ECCICFEKIKNKAK-LDSCDHEFCVKCIKRWTKTNTTCPLCRTNITKIT 50 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6616.17468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 9
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig6616.17468.1 ID=prot_Ecto-sp13_S_contig6616.17468.1|Name=mRNA_Ecto-sp13_S_contig6616.17468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bpback to top |