prot_Ecto-sp13_S_contig12044.1746.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12044.1746.1
Unique Name	prot_Ecto-sp13_S_contig12044.1746.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	305

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12044.1746.1 vs. uniprot
Match: D7FTH4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH4_ECTSI)

HSP 1 Score: 551 bits (1419), Expect = 7.680e-178
Identity = 281/301 (93.36%), Postives = 284/301 (94.35%), Query Frame = 0

Query:    1 MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGGGWHAPPPMKDPLQRRDPLSLQDHEERGHQEEGGGWGDAKWTERERSYGDVGDQRLELVLQAVFIECRSMLLYANVTTAGGPCQASLLLACLLNMECSWCGGQDGMGCVPLEDRPVKRGGRRGDAASSCQTGSCCPLGCNGVGECDFFSATCSCPWLYAGSSCADVSTKGAVALSLSLSALLLVMLSLACGRSSQRKQVEAVMGTLQELKRGLLSDTDGSIGDDDVNLSPFGGKGNRMAFSIGGRGQLPTGR 301
            MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGGGWHAPPPM DPLQ RDPLSLQDHEERG      GWGDAKWTERERSYGDVGDQRLELVLQAVFIECRSMLLYANVTTAGGPCQA     CLLNMECSWCG QDGMGCVP+E+RPVKRGGRRGDAA SCQTGSCCPLGCNGVGECDFFSATCSC WLYAGSSCADVSTKGAVALSLSLSALLLVMLSLACGRSSQRKQVEAVMGTLQELKRGLLSDTDGSIGDDDVNL+PFGGK NRMAFSIGGRGQLPTGR
Sbjct: 1411 MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGGGWHAPPPMPDPLQPRDPLSLQDHEERG------GWGDAKWTERERSYGDVGDQRLELVLQAVFIECRSMLLYANVTTAGGPCQA-----CLLNMECSWCGDQDGMGCVPVEERPVKRGGRRGDAALSCQTGSCCPLGCNGVGECDFFSATCSCRWLYAGSSCADVSTKGAVALSLSLSALLLVMLSLACGRSSQRKQVEAVMGTLQELKRGLLSDTDGSIGDDDVNLAPFGGKSNRMAFSIGGRGQLPTGR 1700

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BLAST of mRNA_Ecto-sp13_S_contig12044.1746.1 vs. uniprot
Match: A0A6H5K5Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q8_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 6.250e-63
Identity = 117/136 (86.03%), Postives = 119/136 (87.50%), Query Frame = 0

Query:    1 MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGGGWHAPPPMKDPLQRRDPLSLQDHEERGHQEEGGGWGDAKWTERERSYGDVGDQRLELVLQAVFIECRSMLLYANVTTAGGPCQASL 136
            MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGGGWH PPPM  PLQ RDP SLQD EE      G G GDAKWTERE  YGD+GDQRLEL LQAVFIECRSMLLYANVTTAGGPCQAS+
Sbjct:  891 MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGGGWHDPPPMPAPLQPRDPPSLQDDEEH-LLFAGSGQGDAKWTERELRYGDLGDQRLELFLQAVFIECRSMLLYANVTTAGGPCQASM 1025

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12044.1746.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12044.1746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FTH4_ECTSI	7.680e-178	93.36	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A6H5K5Q8_9PHAE	6.250e-63	86.03	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 220..239
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 240..305
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..219

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12044	contig	Ecto-sp13_S_contig12044:230..4946 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12044.1746.1	mRNA_Ecto-sp13_S_contig12044.1746.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12044 230..4952 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12044.1746.1 ID=prot_Ecto-sp13_S_contig12044.1746.1|Name=mRNA_Ecto-sp13_S_contig12044.1746.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
MKMNRKWAIVRFGTLDAARNVDTGSLSVRGPPGVSMALAMQNVTLKGGGG
GWHAPPPMKDPLQRRDPLSLQDHEERGHQEEGGGWGDAKWTERERSYGDV
GDQRLELVLQAVFIECRSMLLYANVTTAGGPCQASLLLACLLNMECSWCG
GQDGMGCVPLEDRPVKRGGRRGDAASSCQTGSCCPLGCNGVGECDFFSAT
CSCPWLYAGSSCADVSTKGAVALSLSLSALLLVMLSLACGRSSQRKQVEA
VMGTLQELKRGLLSDTDGSIGDDDVNLSPFGGKGNRMAFSIGGRGQLPTG
REGGG