prot_Ecto-sp13_S_contig6611.17464.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6611.17464.1
Unique Nameprot_Ecto-sp13_S_contig6611.17464.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: D8LPM8_ECTSI (Similar to C18orf24 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM8_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.580e-55
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0
Query:    1 MPDVVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            MP+VVPVELVTVGEL+GVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK
Sbjct:    1 MPEVVPVELVTVGELDGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A6H5KVT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVT8_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 8.020e-53
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
Query:    1 MPDVVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            MP VVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK
Sbjct:  239 MPKVVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 331          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A835YPY4_9STRA (C18orf24 protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.890e-14
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    7 VELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRA 88
            ++LVT  EL  +P++TRGRL ++ VNAA+T++Q  +  ++  L++P+ K++EK R R E+    E P H G  F+ E ++R+
Sbjct:    4 IQLVTSAELQALPKTTRGRLQLDHVNAAITELQAVLTTKYTLLARPKSKLNEKLRRRYEQYAAAEAPEHEGAHFLTESEMRS 85          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A7K6LCH4_9CORV (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Falcunculus frontatus TaxID=254539 RepID=A0A7K6LCH4_9CORV)

HSP 1 Score: 55.5 bits (132), Expect = 1.490e-7
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    9 LVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            L+T+ E   VP   +GRLT +Q+NA V ++ KA+  ++  + +P K MS   R   ++ + QE  A  G  FI E D++A    K
Sbjct:   31 LITMEEFESVPAYMKGRLTYDQINAVVQEMNKAVAAKYKIMYQPLKNMSIPDRNLYDKFMEQETNATRGLFFIVEADIKAFTQLK 115          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A7L1H037_9PICI (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Indicator maculatus TaxID=545262 RepID=A0A7L1H037_9PICI)

HSP 1 Score: 56.2 bits (134), Expect = 2.620e-7
Identity = 32/87 (36.78%), Postives = 44/87 (50.57%), Query Frame = 0
Query:    7 VELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            V L+TV E   VP   +GR+T EQ+N  V +I KA+ER++  L +P K M+   R        +E     G  FI E D+R     K
Sbjct:  134 VGLITVEEFKDVPAYMKGRITYEQINNTVNEINKAVERKYKILQQPLKSMNMATRNHYHRFKEEETKDTKGEFFIVEADMREFTQVK 220          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A7L4CMA9_9AVES (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Nyctiprogne leucopyga TaxID=382315 RepID=A0A7L4CMA9_9AVES)

HSP 1 Score: 55.8 bits (133), Expect = 3.600e-7
Identity = 32/87 (36.78%), Postives = 43/87 (49.43%), Query Frame = 0
Query:    7 VELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            + L+T  E   VP   +GRLT EQ+NA V DI KA+  ++  L +P K M+   R      L +E     G  FI E DL+     K
Sbjct:  133 ISLITAEEFESVPTYMKGRLTYEQINAVVKDINKAVVGKYKILHQPLKSMNAAVRNLYHRFLEEETKETKGEFFIVEADLKQFTELK 219          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A852N8Z8_9PASS (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Pteruthius melanotis TaxID=357074 RepID=A0A852N8Z8_9PASS)

HSP 1 Score: 54.3 bits (129), Expect = 4.130e-7
Identity = 30/85 (35.29%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    9 LVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            L+T  E   VP   +GR+T +Q+NA V +I KA+  ++  L +P K +S + R   +  L +E     G+ FI E DL+A    K
Sbjct:   31 LITTEEFGSVPAYMKGRITCDQINAVVQEINKAVVAKYKILHQPLKSVSVQVRNLYDRFLEEETKDTRGQFFIVEADLKAFTQLK 115          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: UPI0014713D56 (spindle and kinetochore-associated protein 1 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014713D56)

HSP 1 Score: 55.5 bits (132), Expect = 4.820e-7
Identity = 28/87 (32.18%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    7 VELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            +E++TV E   +P+  +GR+T +Q+NAAV  I  A+  ++  L +P K +S   R   ++   QE     G+ F+ E D+R     K
Sbjct:  128 MEVITVQEFESIPQYMKGRVTYDQLNAAVQSINAAVMAKYKILHQPMKTLSSSSRKMYQQFKSQETEGTKGQYFVVEEDIREFTQMK 214          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A093CS66_TAUER (Spindle and kinetochore-associated protein 1 (Fragment) n=2 Tax=Tauraco erythrolophus TaxID=121530 RepID=A0A093CS66_TAUER)

HSP 1 Score: 55.5 bits (132), Expect = 4.980e-7
Identity = 33/90 (36.67%), Postives = 44/90 (48.89%), Query Frame = 0
Query:    4 VVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            V  V L+T+ E   VP   +GRLT  QVNA VTDI KA+  ++  L +P K M+   R      L  E     G  F+ E D+    + K
Sbjct:  130 VKKVPLITIEEFQSVPTYMKGRLTYNQVNAVVTDINKAVVGKYKILHQPLKSMNAAVRNLYHRFLKDETKDTKGEFFVVEADIEEFANLK 219          
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Match: A0A7K7L7P6_9AVES (Spindle and kinetochore-associated protein 1 (Fragment) n=1 Tax=Asarcornis scutulata TaxID=75869 RepID=A0A7K7L7P6_9AVES)

HSP 1 Score: 54.7 bits (130), Expect = 5.080e-7
Identity = 29/85 (34.12%), Postives = 43/85 (50.59%), Query Frame = 0
Query:    9 LVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLSKPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK 93
            L+T  E   VP   +GRLT +Q+NA V D+ KA+  ++  L +P K M+   R      LG+E     G  F+ E D++     K
Sbjct:   67 LITTEEFESVPAYMKGRLTYDQINAVVQDLNKAVVGKYKILHQPLKSMNASVRNLYHRFLGEETKDTKGEFFVVEADIKEFTQLK 151          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6611.17464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM8_ECTSI1.580e-5597.85Similar to C18orf24 protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5KVT8_9PHAE8.020e-5398.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPY4_9STRA4.890e-1439.02C18orf24 protein-like protein n=1 Tax=Tribonema mi... [more]
A0A7K6LCH4_9CORV1.490e-735.29Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7L1H037_9PICI2.620e-736.78Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7L4CMA9_9AVES3.600e-736.78Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A852N8Z8_9PASS4.130e-735.29Spindle and kinetochore-associated protein 1 (Frag... [more]
UPI0014713D564.820e-732.18spindle and kinetochore-associated protein 1 n=1 T... [more]
A0A093CS66_TAUER4.980e-736.67Spindle and kinetochore-associated protein 1 (Frag... [more]
A0A7K7L7P6_9AVES5.080e-734.12Spindle and kinetochore-associated protein 1 (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042031SKA1 microtubule binding domainGENE3D1.10.10.1890coord: 4..93
e-value: 5.4E-20
score: 73.5
IPR009829Spindle and kinetochore-associated protein 1PFAMPF07160SKA1coord: 5..93
e-value: 1.5E-18
score: 67.6
IPR009829Spindle and kinetochore-associated protein 1PANTHERPTHR28573FAMILY NOT NAMEDcoord: 5..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6611contigEcto-sp13_S_contig6611:7379..7867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6611.17464.1mRNA_Ecto-sp13_S_contig6611.17464.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6611 7364..7867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6611.17464.1 ID=prot_Ecto-sp13_S_contig6611.17464.1|Name=mRNA_Ecto-sp13_S_contig6611.17464.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
MPDVVPVELVTVGELNGVPRSTRGRLTIEQVNAAVTDIQKAIERRHAFLS
KPRKKMSEKQRGRLEELLGQEVPAHGGRPFIAEPDLRALPSFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042031SKA1-MBD
IPR009829SKA1