prot_Ecto-sp13_S_contig6611.17460.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6611.17460.1
Unique Nameprot_Ecto-sp13_S_contig6611.17460.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length748
Homology
BLAST of mRNA_Ecto-sp13_S_contig6611.17460.1 vs. uniprot
Match: A0A6H5KV73_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV73_9PHAE)

HSP 1 Score: 650 bits (1676), Expect = 1.030e-211
Identity = 620/756 (82.01%), Postives = 628/756 (83.07%), Query Frame = 0
Query:    1 MDDVGVDDHRKGDTPTTRPVSHQAPRNIPSLGLNSRSGGRELAPVAEGPPVSLAXXXXXXXXXXXXXETAEALLSMSPSVRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDDPVGTPNSTASMSRRLGPGSPLSGTGLLRTARRAMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------RRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSGAGSAGDGGGKVDESRGREDGSSPXXXXXXXXXXXXXXXXXEGDEDVTVVVSGRGVGSSGGEGEQGSVQGVVGKRKRIARGGGVHDDDTTRGDRGRNERQASDGVEGGPSQGQGRXXXXXXXXXXXXDNEGSEGMEVFDISALGAGSNSGDNGMALLTTAPPLDSEGRGGGGXGDSHDXXXXXXXXXXXXXXXXAAAPLPAAAVDSNSHXXXXXXXXXXSRSRGRADAPPTAAVRKRCRPPGSESAEVDGRPLTSGKGKSKTVKAGRSSXXXXXXX---RSSVDDRGDGRGLQGVRANGRRGLATSAAAVAAEEDGAVVLTMSGSTSETSRLADSLAKR 747
            MDDVGVDDHR+GDTPTT PVSHQAPRN PSLG  S SGG E APV +GPPVSLA             ETAEALLSMSPSVRHG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ACDDPVGTPNSTAS+SRRLGPGSP S TGLLRT R    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      R PATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRP+GTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 SRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSS AGSAGDG                XXXXXXXXXXXXXX   EGD+ VTVVVS RGVGSSGGEG QGSV+GVVGKRKRIARGGGV DDDTTRGDRGRNERQASDGVEGGPSQGQGR  XXXXXXXXXX         VFDISA  AGSNSGDNGMALLTTAPPLD EGRGGG   D   XXXXXXXXXXXXXXXX  APLPAAAVDSN H   XX     SRSRGRA APPTAAVRKRCRP GSESAEVDGRP+TSGKGK KTVKAGRS XXXXXXX   RS VD RGD  GLQG  ANGRRGLATSAAAVA EEDGAVVLTMSGSTSETS+LADSLAKR
Sbjct:  640 MDDVGVDDHREGDTPTTTPVSHQAPRNPPSLGQTSSSGGHEFAPVRKGPPVSLAAAAATAPAAL---ETAEALLSMSPSVRHGGGSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGACDDPVGTPNSTASLSRRLGPGSPSSATGLLRTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPNGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTPASKGAPSSS----SRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSRAGSAGDG---XXXXXXXXXXXXXXXXXXXXXXXXXXXGAKEGDDGVTVVVSDRGVGSSGGEGGQGSVKGVVGKRKRIARGGGVDDDDTTRGDRGRNERQASDGVEGGPSQGQGRRHXXXXXXXXXXXXXXXXXXXVFDISASSAGSNSGDNGMALLTTAPPLDYEGRGGG---DXXXXXXXXXXXXXXXXXXXXXAPLPAAAVDSNIHGGGXXSG---SRSRGRAAAPPTAAVRKRCRPSGSESAEVDGRPVTSGKGKGKTVKAGRSXXXXXXXXXXXRSGVDGRGDXXGLQGACANGRRGLATSAAAVA-EEDGAVVLTMSGSTSETSKLADSLAKR 1378          
BLAST of mRNA_Ecto-sp13_S_contig6611.17460.1 vs. uniprot
Match: D8LPM9_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM9_ECTSI)

HSP 1 Score: 539 bits (1389), Expect = 5.360e-176
Identity = 542/752 (72.07%), Postives = 548/752 (72.87%), Query Frame = 0
Query:    1 MDDVGVDDHRKGDTPTTRPVSHQAPRNIPSLGLNSRSGGRELAPVAEGPPVSLAXXXXXXXXXXXXXETAEALLSMSPSVRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ACDDPVGTPNSTASMSRRLGPGSPLSGTGLLRTARRAMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSGAGSAGDGGGKVDESRGREDGSSPXXXXXXXXXXXXXXXXXEGDEDVTVVVSGRGVGSSGGEGEQGSVQGVVGKRKRIARGGGVHDDDTTRGDRG--RNERQASDGVEGGPSQGQGRXXXXXXXXXXXXDNEGSEGMEVFDISALGAGSNSGDNGMALLTTAPPLDSEGRGGGGXGDSHDXXXXXXXXXXXXXXXXAAAPLPAAAVDSNSHXXXXXXXXXXSRSRGRADAPPTAAVRKRCRPPGSESAEVDGRPLTSGKGKSKTVKAGRSSXXXXXXXRSSVDDRGDGRGLQGVRANGRRGLATSAAAVAAEEDGAVV--LTMSGSTSETSRLADSLAK 746
            MDDVGVDDHR+GDTPTTRPVSHQAPRN PSLG  S S GRELAPVAEGPPVSLA             ETAE LLSMSPSVRHG                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ACDDPVGTPNSTAS SRRLGPGSP S TGLLRT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         SRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSGAGSAGDGGGKVD           XXXXXXXXXXXXXXXXX                                                        R+ERQ SD VEGGPSQGQGRXXXXXXXX     NE SEGMEVFDISAL AGSNSGDNGM LLTTAPPLDSEGRGGGG GD+HDXXXXXXXXXXXXXXXX A PLP A VD NSH  XXXXX   SRSRGRA APPTAAVRKRCRPPGSESAEV GRP+TSGKGKSKT KAG  SXXXXXXX   VD RGDG GLQG  ANGRRG ATS               LTMSGS+SE S+LADSLAK
Sbjct:    1 MDDVGVDDHREGDTPTTRPVSHQAPRNTPSLGQTSSSRGRELAPVAEGPPVSLAAAAAAPAAL----ETAETLLSMSPSVRHGSGSLEHGRDGGAPPARPTSSVSRRDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDDPVGTPNSTASFSRRLGPGSPSSATGLLRTTXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGSSSRSSTPASKEAPSS------SRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSGAGSAGDGGGKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDERQVSDDVEGGPSQGQGRXXXXXXXXISSSANEASEGMEVFDISALSAGSNSGDNGMTLLTTAPPLDSEGRGGGG-GDNHDXXXXXXXXXXXXXXXXXAVPLPTATVDFNSHGGXXXXXSG-SRSRGRAAAPPTAAVRKRCRPPGSESAEVGGRPVTSGKGKSKTAKAG-GSXXXXXXXXXGVDGRGDGGGLQGACANGRRGQATSXXXXXXXXXXXXXXXLTMSGSSSEMSKLADSLAK 733          
BLAST of mRNA_Ecto-sp13_S_contig6611.17460.1 vs. uniprot
Match: A0A485KVR3_9STRA (Aste57867_12351 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVR3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.210e-5
Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:  240 FKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVD 299
             K G LV V  R  PG+NKEGGVA+V  V  DGT +VKY+V  GR++ +P   I   A D
Sbjct:   32 LKQGTLVMVDPRFWPGMNKEGGVARVERVNQDGTVNVKYVVVGGRDRNIPPACIHVTAAD 91          
BLAST of mRNA_Ecto-sp13_S_contig6611.17460.1 vs. uniprot
Match: A0A1Z5KMS0_FISSO (BRCA1-associated RING domain protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMS0_FISSO)

HSP 1 Score: 57.8 bits (138), Expect = 7.830e-5
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  236 ATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFY 296
            AT SFK GD+++V  R+ PG+NK+GG+AKV  V  D + DV Y++  G+EK V A   S +
Sbjct:  407 ATASFKVGDIIAVKPRTWPGINKQGGIAKVIKVNEDNSYDVSYVLG-GKEKRVDAVFCSIH 466          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6611.17460.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KV73_9PHAE1.030e-21182.01BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LPM9_ECTSI5.360e-17672.07BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A485KVR3_9STRA1.210e-550.00Aste57867_12351 protein n=1 Tax=Aphanomyces stella... [more]
A0A1Z5KMS0_FISSO7.830e-547.54BRCA1-associated RING domain protein 1 n=1 Tax=Fis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6611contigEcto-sp13_S_contig6611:220..2463 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6611.17460.1mRNA_Ecto-sp13_S_contig6611.17460.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6611 220..2463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6611.17460.1 ID=prot_Ecto-sp13_S_contig6611.17460.1|Name=mRNA_Ecto-sp13_S_contig6611.17460.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=748bp
MDDVGVDDHRKGDTPTTRPVSHQAPRNIPSLGLNSRSGGRELAPVAEGPP
VSLAAAAAAAAAPPAALETAEALLSMSPSVRHGGGSLDHHRDGGAPPVRP
TSSVSRRDGDDVAVTAGGGGGGDGSKPPVPPGEEEAKEEEGGACDDPVGT
PNSTASMSRRLGPGSPLSGTGLLRTARRAMPPPPPPPPASYRSPTLARPP
NASSSSSSSTPPPPPGPLPSQTPPAAAAAAAARRPATPSFKAGDLVSVPS
RSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDD
DHNDEESTSAGGGGGGDGRRERGGGGRGAVAAGSSGSSSRSSTPASKEAP
SSTSSSSRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDL
GELLDPNEGSSGAGSAGDGGGKVDESRGREDGSSPAAAAAAAAAAAAEEE
AKEGDEDVTVVVSGRGVGSSGGEGEQGSVQGVVGKRKRIARGGGVHDDDT
TRGDRGRNERQASDGVEGGPSQGQGRRRRRRRRRSSSSDNEGSEGMEVFD
ISALGAGSNSGDNGMALLTTAPPLDSEGRGGGGGGDSHDVFDITALNDET
NSGDNAAAPLPAAAVDSNSHGGGGGSGSSGSRSRGRADAPPTAAVRKRCR
PPGSESAEVDGRPLTSGKGKSKTVKAGRSSGGGGGGGRSSVDDRGDGRGL
QGVRANGRRGLATSAAAVAAEEDGAVVLTMSGSTSETSRLADSLAKR*
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