mRNA_Ecto-sp13_S_contig6609.17457.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: D7FJK0_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK0_ECTSI) HSP 1 Score: 1636 bits (4236), Expect = 0.000e+0 Identity = 898/979 (91.73%), Postives = 914/979 (93.36%), Query Frame = 1
Query: 148 MDVRGVIVPVSESPGDLYWVKRSRTLVEATQISERKPPSEGFDELSLKDCKREEDIHAGRASSSDTTVPSTPSTLCTSTCSTVTPATSSGIPSSAWSQFFGGNTPRECPSSSASSTLTQLDATQQETSADRHVDANIPNASNDNGNDLDETPC--DCGEGYEVGTQVGEESSSTTHGVKRPREQTPRVDQSQHAQEGSRFSHASDGQTPDEMPPRALPGDLGSPRRKKECLAQSQYPRLDGHPTHAGPRLHRTQFGNSGAKEESMPRVRSNAADIFDGAMGSSEASCERRHPLNMKRAGGATAGNETADRASEHASMDNPPEQESINVRGAAADPVSDKIGSEGIEGKRRTLSSGDSRSTTCSRAGQSSSRKVLGCQGPINQTRCSDLPDCDAVADVRMKDAASFRRVGITENSKRGKIFEMLKQLGWKWSGGTLHKLSNEYWMLKPGASVRNGEAGVDKFAGQGQTIEYVQSVLRLSATAKSDGQGQLSEENTNGEEXXXXXXEENEEGXXXXXXXGDTXXXXXXXXXXXXXXXEGEENGGREDMTKELEQHRLTTSTTKRRALQSALEALNPSNAPDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKKAPQRLLFQSYTPEDLACILTERVGSTVHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQELQQKLD-ATSEAEREQLGEGGGDSLVTIRHMAMAVAAGNAAKYAGAIAALSLHAKVVLTVAAAAVGAVSDRGGGAGAHGGKGVRLTQGSLQEKCSSAWRKLQTAGGPSQIEFTGIVDLLAASGLLGLKSKQQTGGRTRELVLKIEFADLEAALGDQSFFKTVTGVQ 3075
MDVRGV+ PVSESPGDLYWVKRSRTLVEAT+ISERKPPSEGFDE SLK CKREEDIHAGR + SDTTVPSTPSTLC STCSTVTPATSSGIPSSAWSQF GGNTPRECPSSSASSTLTQLDATQQE SADR VDANIPN SND+GNDLDETPC D GEGYEVGTQVGEESS TTHGVKRPREQTPRVDQSQHAQEGSRFSHASDGQTPDEMPPRALPGDLGSPRRKKECLAQSQYPRLDGHPT AGPR HR QFGNSGA+EESMPRVRSNAADIFDGAMGSSEASCE RHPLN KRAGGATAGNETADRASEHASMDNPPEQESI+VRGAAADPVSDK+GSEG+EG+ TLSSGDSRSTT SRAGQSS RKV GCQG INQTRCSD PD DAV +VRMKDAASFRRVGITENSKRGKIFEMLKQLGWKWSGGTLHKLSNEYWMLKPGA+VRNGEAGVDKFAGQGQTIEYVQSVLRLSA A SDGQG XXXXXX XXXXXXXXXXXXXXXEGEENGGREDMTKE EQHRL TSTTK RALQSALEALNPSNAPDVLK+RTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEV+EKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGAR GEEGIGTEKKLDNKLKYWQKKPTA+SPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKKAPQRLLFQSYTPEDLA ILTERVGSTVHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQELQQKLD ATSEAEREQLGEGGGD+LVTIRHMA AVAAGNAAKYAGAIAALSLHAKVVLTVAAAAVGAVSDRGGGAGAHG KGVRLTQGSLQEKCSSAWRKLQTAGGPSQIEFTGI+DLLAASGLLGLKSKQQTGGRTRELVLKIEFADLEAALGDQSFFKTVTGVQ
Sbjct: 1 MDVRGVVAPVSESPGDLYWVKRSRTLVEATRISERKPPSEGFDEPSLKGCKREEDIHAGRTNLSDTTVPSTPSTLCASTCSTVTPATSSGIPSSAWSQFSGGNTPRECPSSSASSTLTQLDATQQEPSADRQVDANIPNGSNDSGNDLDETPCRSDYGEGYEVGTQVGEESSCTTHGVKRPREQTPRVDQSQHAQEGSRFSHASDGQTPDEMPPRALPGDLGSPRRKKECLAQSQYPRLDGHPTPAGPRFHRNQFGNSGAQEESMPRVRSNAADIFDGAMGSSEASCEGRHPLNRKRAGGATAGNETADRASEHASMDNPPEQESIDVRGAAADPVSDKVGSEGVEGEPTTLSSGDSRSTTSSRAGQSSLRKVSGCQGSINQTRCSDPPDSDAVENVRMKDAASFRRVGITENSKRGKIFEMLKQLGWKWSGGTLHKLSNEYWMLKPGATVRNGEAGVDKFAGQGQTIEYVQSVLRLSAAANSDGQGXXX---------------------XXXXXXXXXXXXXXXXXXXXXXXXEGEENGGREDMTKEPEQHRLLTSTTKGRALQSALEALNPSNAPDVLKRRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVQEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARGGEEGIGTEKKLDNKLKYWQKKPTATSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKKAPQRLLFQSYTPEDLASILTERVGSTVHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQELQQKLDDATSEAEREQLGEGGGDNLVTIRHMAKAVAAGNAAKYAGAIAALSLHAKVVLTVAAAAVGAVSDRGGGAGAHGSKGVRLTQGSLQEKCSSAWRKLQTAGGPSQIEFTGIIDLLAASGLLGLKSKQQTGGRTRELVLKIEFADLEAALGDQSFFKTVTGVQ 958
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A7K5FBI9_PROAR (CDC6 protein (Fragment) n=3 Tax=Psittaciformes TaxID=9223 RepID=A0A7K5FBI9_PROAR) HSP 1 Score: 137 bits (346), Expect = 1.520e-32 Identity = 90/246 (36.59%), Postives = 136/246 (55.28%), Query Frame = 1
Query: 1873 PDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAIN-GARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDF---NISFSGLKKAPQRLLFQSYTPEDLACILTERVGST-----VHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQEL 2583
PD L R E + QF+ + V K GSLY+ G PGTGKT ++ V + +++ + SP+ + +L +A+ A G EG L+ +K+ TA PM++VVLDE+DQL ++ + VL LF+W P SRLVLVG+AN+LD +++ G +P+ L F YT E L IL +R+G + +A+QFCA+K +A +GDAR+AL+ CR AV + + E+
Sbjct: 22 PDRLHAREREMGIIRQFLKDHVCKRRPGSLYISGAPGTGKTACLSRVLLDCKDELAGSKTIV-----LNCMSLRSPSCVFPSLAQALGLPAATGREG----------LRSLEKRLTAPGPMVLVVLDELDQLESKGQDVLYTLFEWPRLPGSRLVLVGMANALDLADRSLARLGAHGSPRLLHFPPYTREQLTSILQDRLGQVAGDPVLDAAALQFCARKVSAVSGDARKALDVCRRAVEMVELEV 252
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: UPI00051ACA9C (cell division control protein 6 homolog n=1 Tax=Cuculus canorus TaxID=55661 RepID=UPI00051ACA9C) HSP 1 Score: 139 bits (351), Expect = 4.720e-32 Identity = 93/247 (37.65%), Postives = 135/247 (54.66%), Query Frame = 1
Query: 1873 PDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDF-NISFSGLKK----APQRLLFQSYTPEDLACILTERVGST-----VHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQEL 2583
PD L R E + QF+ V GSLY+ G PGTGKT ++H+ + +++ +K A + + P A+ L + G R G + +K+ TA PM+++VLDE+DQL ++ + VL LF+W P SRLVLVGLAN+LD + S + L+ APQ L F YT E LA IL ER+G + +A+QFCA+K +A +GDAR+AL+ CR AV + + E+
Sbjct: 126 PDRLHGREKEMGIIRQFLKEHVCGHRSGSLYISGAPGTGKTACVSHILLDCKDELAKSKTIVLNCMALSSPQGVFP-AVAQQLELPVVGGREGPRRL-------------EKELTARGPMVLLVLDELDQLESKGQDVLYTLFEWTRLPGSRLVLVGLANALDLTDRSLARLRSCPRGAPQLLRFAPYTREQLAAILQERLGQVDGDPILDAAALQFCARKVSALSGDARKALDVCRRAVEVVELEV 358
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A7C8JYE8_ORBOL (Origin recognition complex subunit 1 n=9 Tax=Orbiliaceae TaxID=47021 RepID=A0A7C8JYE8_ORBOL) HSP 1 Score: 145 bits (365), Expect = 7.950e-32 Identity = 93/266 (34.96%), Postives = 139/266 (52.26%), Query Frame = 1
Query: 1804 LTTSTTKRRALQSALEALNPSNAPDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKKAPQ----RLLFQSYTPEDLACILTERV----GSTVHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQ 2577
L+ +T Q A L+ S+ PD L R TEF V + +++ SG +Y+ G PGTGKT T+ V A+++ + + I F G + T P+ + LW AI G G + L N L+ P+ +VV++DE+DQL+T+N+ V+ F W SRL+++ +AN++D K + + R+ F YT E L I+ R+ G+ V P AIQF A+K AA +GDARRAL+ CR AV L +Q
Sbjct: 340 LSPATHLASPYQIARNRLHVSSVPDSLPCRETEFGTVYAHLHDAITTGSGSCIYISGTPGTGKTATVREVIAQLQVQVEEEEIEDFIFLEINGMKITDPHQSYSLLWEAIQGDSEGPARVAPNHAL-NLLEREFSTPSPRRVPIVVLMDELDQLVTKNQSVMYNFFNWPSMTHSRLIVLAVANTMDLPERTLSNKISSRLGLTRITFPGYTHEQLKKIIESRLEGVPGNIVQPDAIQFAARKVAAVSGDARRALDICRRAVELVEQ 604
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A6J0JDQ2_RAPSA (Cell division control protein n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0JDQ2_RAPSA) HSP 1 Score: 141 bits (355), Expect = 9.280e-32 Identity = 115/418 (27.51%), Postives = 208/418 (49.76%), Query Frame = 1
Query: 1834 LQSALEALNPSNAPDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARRGEEGIGTEKKLDN-KLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISF----SGLKKAPQRLLFQSYTPEDLACILTERVGSTVH----PSAIQFCAKKAAATTGDARRALNTCREAVVLADQELQQKLDATSEAEREQLGEGGGDSLVTIRHMAMAVAAGNAAKYAGAIAALSLHAKVVLTVAAAAV-GAVSDRGGGAGAHGGKGVRLTQGSLQEKCSSAWRKLQTAGGPSQIEFTGIVDLLAASGLLGLKSKQQTGGRTRELVLKIEFADLEAALGDQSFFK 3057
+++ EAL+ S AP + R E +VL+FV + + GSLY+CG PGTGK+ +M VR + ++ + +P + T T + + + + G++ IG+ L+ ++ + QK+ + SS M++++ DE+D L+T +R VL +LF P SR +L+G+AN++D F L P + F +Y+ + + IL ER+ + P A++ CA+K +A +GD R+AL+ CR A+ + + E++ +D + + D +V + HM A+A + I +L H ++++ AA A G+ DR + E C S+ + T G + EFT + +L G++ K Q + + + L+++ AD+ AL + FF+
Sbjct: 92 MKAVKEALHVSTAPSTVVCREEEQGRVLEFVKGCMEQKKAGSLYICGCPGTGKSLSMEKVRQQAQDWAKQEGLPCLETVSVNCTSLTKTTDIFSKI---LGENKTGKKAIGSSSPLEQLQIMFSQKRESPSSKMMLIIADEMDYLITRDRGVLHELFMLTTLPFSRCILIGVANAIDLADRFLPKLKSLNCKPLVVTFPAYSMQQILRILQERLVELPYVAFQPKALELCARKVSAASGDMRKALSVCRSALEILETEVKGSIDHEPQTPVTE------DQVVKMDHMLAALAKTFKSPVVDTIQSLPQHQQIIVCSAAKAFRGSKKDRT----------IAELNKLYLEICKSS---MITPAGIT--EFTNMCTVLNDQGIV--KLSQARNDKLKRVSLRVDEADITFALKEIRFFR 483
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A852K9A9_UROIN (CDC6 protein (Fragment) n=1 Tax=Urocolius indicus TaxID=458196 RepID=A0A852K9A9_UROIN) HSP 1 Score: 134 bits (338), Expect = 1.760e-31 Identity = 90/250 (36.00%), Postives = 136/250 (54.40%), Query Frame = 1
Query: 1873 PDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAIN-GARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKK-------APQRLLFQSYTPEDLACILTERVGST-----VHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQEL 2583
PD L R E + QF+ + V + GSLY+ G PGTGKT ++ V + +++ +K SP + A+ + + G EG L+ +K TA PM+++VLDE+DQL ++ + VL LF+W+ P SRLVLVGLAN+LD ++ GL + +P+ L F YT E L+ IL ER+G + +A+QFCA+K +A +GDAR+AL+ CR AV + + E+
Sbjct: 20 PDRLHGREKEMGTIRQFLRDHVCRRQPGSLYISGAPGTGKTACLSRVLLDCKDELTKSKTIL-----LNCMSLNSPQGVFHAVAQQLGLPVATGREG----------LRRLEKHLTAQGPMVLLVLDELDQLESKGQDVLYTLFEWSRLPNSRLVLVGLANTLD--LTDRGLARLGAHPAGSPRLLHFPPYTREQLSTILQERLGQVAGDPVLDAAALQFCARKVSAVSGDARKALDVCRRAVEVVELEV 252
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A7L1GVB5_9PICI (CDC6 protein (Fragment) n=2 Tax=Piciformes TaxID=9219 RepID=A0A7L1GVB5_9PICI) HSP 1 Score: 133 bits (335), Expect = 4.540e-31 Identity = 98/261 (37.55%), Postives = 141/261 (54.02%), Query Frame = 1
Query: 1837 QSALEALNPSNAPDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAIN--GARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDF-NISFSGLKK----APQRLLFQSYTPEDLACILTERVGST-----VHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQEL 2583
Q A AL+ + P+ L R E + QF+ + + GSLY+ G PGTGKT ++ V + KG + +SP + AL + + GA G EG+ + +KK TA PM+++VLDE+DQL ++ + VL LF+W P SRLVLVGLAN+LD + S + L +PQ L F YT E L ILTER+G + +A+QFCA+K +A +GDAR+AL+ CR AV + + E+
Sbjct: 9 QQAKRALHAA-VPEHLHAREREIGIIRQFLRDHICGRRPGSLYISGAPGTGKTACLSRVLLDC-----KGDLTGSKTIVLNCMALSSPAGIFPALAQELGLPGAT-GREGM----------QRLEKKLTAQGPMVLLVLDELDQLESKGQDVLYTLFEWPWLPGSRLVLVGLANALDLTDRSLARLSARPAGSPQLLHFPPYTREQLTAILTERLGQVAGAPVLDAAALQFCARKVSAVSGDARKALDVCRRAVEVVELEV 252
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A6P8HUX5_ACTTE (Cell division control protein n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HUX5_ACTTE) HSP 1 Score: 139 bits (351), Expect = 6.450e-31 Identity = 125/438 (28.54%), Postives = 208/438 (47.49%), Query Frame = 1
Query: 1840 SALEALNPSNAPDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAM----HGALWRAINGARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKKA-----PQRLLFQSYTPEDLACILTERVGSTVHPS------AIQFCAKKAAATTGDARRALNTCREAV---------------VLADQELQQKLDATSEAEREQLGEGGGDSLVTIRHMAMAVAAGNAAKYAGAIAALSLHAKVVLTVAAAAVGAVSDRGGGAGAHGGKGVRLTQGSLQEKCSSAWRKLQTAGGPSQIEFTGIVDLLAASGLLGLKSKQQTGGRTRELVLKIEFADLEAALGDQSFFKTV 3063
SA++ + P L R E N + F+ N ++K GSLY+ G PGTGKT + V E+E++ G T N M A++ I G++ + + + K +K+ T+S PM ++VLDE+DQL T+N+ VL +F+W PKS+L+L+G+AN+LD +A P+ L F Y+ +A IL +R+ T + AIQFCA+K A+ GD R+AL+ CR AV +L+D+ K AT +++G ++V+ + + +A + G+ + L K+++ + GK +T G + S +K Q + SQ +F G+ +L A G+LGLK ++T R ++ LKI+ ++E AL D++ ++
Sbjct: 139 SAVKKALHTGTPKALLCREKELNTIQTFLHNHLSKQKPGSLYISGAPGTGKTACLTKVMNELEDELD-------------GCPITFVNCMTLQHSNAIFNKILEDFPGKDKVCGK----DSQKVLEKRITSSGPMRIIVLDEVDQLETKNQDVLYTMFEWPSLPKSKLILIGIANALDLTDRILPRLQARPKCKPELLHFTPYSRSQIATILQDRISQTSESAVILDAPAIQFCARKVASVAGDMRKALDICRRAVEIVEADVRKQQILQPILSDKTNSPKKVATVVPTTKKVGIAQIANVVSDVYGSRIMAGSS-----GSQPTIPLQQKLLICTLMLIM------------KQGKSKEVTIGKFHDMYCSVCKKQQISQ-VSQDDFIGLCKMLEARGILGLKKAKET--RLMKVSLKIDEKEVEFALQDKTLLSSI 539
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A7L2V2H7_9AVES (CDC6 protein (Fragment) n=1 Tax=Brachypteracias leptosomus TaxID=135165 RepID=A0A7L2V2H7_9AVES) HSP 1 Score: 132 bits (333), Expect = 8.380e-31 Identity = 89/249 (35.74%), Postives = 139/249 (55.82%), Query Frame = 1
Query: 1873 PDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDFNISFSGLKK-------APQRLLFQSYTPEDLACILTERVGST-----VHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQEL 2583
PD L R E + QF+ V GSLY+ G PGTGKT ++ V + +++ S G++ N M + +++ E G+ + D+ ++ +K+ TA PM+++VLDE+DQL ++ + VL LF+W P SRLVLVGLAN+LD ++ GL + +P+ L F YT E L+ ILT+R+G + +A+QFCA+K +A +GDAR+AL+ CR AV + + E+
Sbjct: 20 PDRLHAREREMGTIRQFLQQHVCGHQPGSLYISGPPGTGKTACLSRVLLDCKDELS-------------GSKTIVVNCMSLSSPQSVFPVLAQELGLPSATSRDS-VRRLEKQLTAKGPMVLLVLDELDQLESKGQDVLYTLFEWPRLPNSRLVLVGLANALD--LTDRGLSRLSACPAGSPRLLHFPPYTREQLSTILTDRLGQVAGDPVLDAAALQFCARKVSAVSGDARKALDVCRRAVEVVELEV 252
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Match: A0A7K5A5R4_9AVES (CDC6 protein (Fragment) n=2 Tax=Centropus TaxID=57401 RepID=A0A7K5A5R4_9AVES) HSP 1 Score: 132 bits (332), Expect = 1.200e-30 Identity = 89/247 (36.03%), Postives = 133/247 (53.85%), Query Frame = 1
Query: 1873 PDVLKQRTTEFNQVLQFVTNSVAKASGGSLYLCGVPGTGKTQTMAHVRAEVEEKFSKGHIPAPAFHAFTGTEFTSPNAMHGALWRAINGARRGEEGIGTEKKLDNKLKYWQKKPTASSPMLVVVLDEIDQLMTENRQVLRKLFQWADAPKSRLVLVGLANSLDF-NISFSGL----KKAPQRLLFQSYTPEDLACILTERVGST-----VHPSAIQFCAKKAAATTGDARRALNTCREAVVLADQEL 2583
PD L R E + QF+ + V GSLY+ G PGTGKT M+H+ E + + ++ + + + P A+ L + R G++ + +K+ TA PM+++VLDE+DQL ++ + VL LF+W P SRLVLVGLAN+LD + S + L + PQ L F YT E L IL ER+ + +A+QFCA+K +A +GDAR+AL+ CR AV + + E+
Sbjct: 22 PDRLHGREKETGIIRQFLQDHVCGHQPGSLYISGAPGTGKTACMSHILLECKNELARSKTIVLNCMSLSSPQGVFP-AVAQQLGLPVATGREGQQRL-------------EKQLTARGPMVLLVLDELDQLESKGQDVLYTLFEWPQLPGSRLVLVGLANALDLTHRSLARLHTCPRGGPQLLHFAPYTREQLTAILQERLAQVAADPILDAAALQFCARKVSAVSGDARKALDVCRRAVEVVELEV 254 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6609.17457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6609.17457.1 >prot_Ecto-sp13_S_contig6609.17457.1 ID=prot_Ecto-sp13_S_contig6609.17457.1|Name=mRNA_Ecto-sp13_S_contig6609.17457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1026bp TQPALQPQPPICLGKNMSSSSKSLWIRYENDNGDWEPAFLLPKCPPEVVMback to top mRNA from alignment at Ecto-sp13_S_contig6609:2995..8083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6609.17457.1 ID=mRNA_Ecto-sp13_S_contig6609.17457.1|Name=mRNA_Ecto-sp13_S_contig6609.17457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5089bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6609:2995..8083- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6609:2995..8083- >mRNA_Ecto-sp13_S_contig6609.17457.1 ID=mRNA_Ecto-sp13_S_contig6609.17457.1|Name=mRNA_Ecto-sp13_S_contig6609.17457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3078bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6609:2995..8083- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |