prot_Ecto-sp13_S_contig6609.17456.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: D7FJJ9_ECTSI (Ribosomal RNA-processing protein 43 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJJ9_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 2.930e-185 Identity = 265/274 (96.72%), Postives = 270/274 (98.54%), Query Frame = 0
Query: 1 MEVEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTEDTPTPLVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVRIQS 274
MEVEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQA VLSTFV+NSIVESGALVLTDLAIDDG+FAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTEDTPT LVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVT VST+EGKVCGVHKPGGSCASG+QLNECLQLCQQHAKQ+TQTL AAVRIQS
Sbjct: 1 MEVEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAHVLSTFVKNSIVESGALVLTDLAIDDGAFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTEDTPTQLVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVTVVSTSEGKVCGVHKPGGSCASGKQLNECLQLCQQHAKQLTQTLAAAVRIQS 274
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: A0A836C8N5_9STRA (Ribosomal RNA-processing protein 43 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8N5_9STRA) HSP 1 Score: 257 bits (656), Expect = 7.700e-82 Identity = 143/281 (50.89%), Postives = 182/281 (64.77%), Query Frame = 0
Query: 1 MEVEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDD-EIFVTEDTPTPLVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVTAV-STAEGK----------VCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAA 269
MEVEAFQ+LDP+ FYR+F+ GVRPDGR L+ VR ++V GVL+ V ASALV LG TKV+ GI+LQVG PS+ P CG ++V V LTPL SS FS GRPSEQAQ L +R+ + S DL I+ FAW+LC+D+ CLS++GN ADA L++ L+RL+LP T D E+ V E TPL V VP+PLT GVF+G ++ADPSLLEE+L+ +T V S EGK VC VHK GG+C + L L L + HA++V L A
Sbjct: 1 MEVEAFQKLDPQTFYRKFLSEGVRPDGRGLQEVRDVAVSCGVLTAPHVAASALVTLGDTKVVTGITLQVGQPSQAEPGCGDVEVSVHLTPLCSSMFSVGRPSEQAQALEALIRDVLTASRPFRREDLLIEARRFAWRLCIDMYCLSYEGNAADAALLSVAACLLRLRLPPTVITPDGEVLVAEGEGTPLPVSHVPLPLTFGVFEGALVADPSLLEEDLVAAALTVVQSLDEGKGGSGGGGAARVCAVHKAGGACVAPALLARALALGRSHAQRVLPVLRGA 281
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: UPI00074FE3AF (exosome complex component RRP43 n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE3AF) HSP 1 Score: 186 bits (473), Expect = 1.620e-54 Identity = 109/274 (39.78%), Postives = 155/274 (56.57%), Query Frame = 0
Query: 1 MEVEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
M F+ ++P +YRRF+K RPDGREL R +V+VG ++ SALV LG+ V+ GI + P ++ G + V L PL SS+F G P E+AQ S F+ + I S + DL I DG AW L DI+CL +DGNL DA + A + AL +QLP R I++E + E T L VR+ PV + +FD ++I DP+ EE+L T VT V+ EGK+C VHKPGGS G +L +C+ + K+V + L+ ++
Sbjct: 1 MAAGGFRTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSITT--ADGSALVKLGNMTVICGIKAEFAAPPVDSSNKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFMADLIENSQVVRKEDLCIVDGKLAWVLYCDIICLDYDGNLLDACVCALLAALKNVQLPAVR-INEETGLAEVNLKEKTALTVRKEPVAASFVLFDSLVIVDPTAEEEDLATGTVTIVTDEEGKLCSVHKPGGSALMGAKLQDCIGRAKTRHKEVKKLLDTLIK 271
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: A0A803TXF1_ANOCA (Ribosomal RNA-processing protein 43 n=2 Tax=Iguania TaxID=8511 RepID=A0A803TXF1_ANOCA) HSP 1 Score: 184 bits (467), Expect = 1.330e-53 Identity = 103/270 (38.15%), Postives = 155/270 (57.41%), Query Frame = 0
Query: 5 AFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDGIIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
F+ ++P +YRRF+K RPDGR+L R ++++G ++ SALV LG+T V+ GI + P ++ G + V L PL SS+F G P E+AQ S FV + I S ++ DL I DG AW L DI+CL +DGNL DA + A + AL +QLP I++E + E PL +R+ PV + +FD ++I DP+ EE+L T +T V+ EGK+C VHKPGGS +G +L +C+ K+V + ++ ++
Sbjct: 6 GFRTVEPVEYYRRFLKENCRPDGRDLGEFRTTTINIGSITT--ADGSALVKLGNTTVVCGIKAEFAAPLADSSNKGYIVPNVDLPPLCSSRFRPGPPGEEAQAASQFVADVIENSQVVMKEDLCIVDGKIAWVLYCDIICLDYDGNLLDACMCAFLAALRNVQLPAVT-INEETGLAEVNLKEKIPLTIRKEPVATSFILFDTVMIVDPTAEEEDLATGMLTIVTDEEGKLCSVHKPGGSALTGAKLQDCISRATARYKEVKKLIDKVIK 272
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: UPI00115C7504 (LOW QUALITY PROTEIN: exosome complex component RRP43 n=2 Tax=Pipridae TaxID=114313 RepID=UPI00115C7504) HSP 1 Score: 184 bits (466), Expect = 1.820e-53 Identity = 103/271 (38.01%), Postives = 161/271 (59.41%), Query Frame = 0
Query: 5 AFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDG-IIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
AF+ ++P +Y+RF+K +PDGREL R +V++G ++ SALV LGST V+ G+ ++ P+ ++ G + V+L L S +F SG P E+AQ S F+ + I S +V DL I +G AW L DI CL +DGNL DA++ A + AL +QLP I++E ++E TPL++R+ PV + VFD ++I DP+ +E+L T VT V+ EG++C VHKPGGS +G +L +C+ K+V + ++ ++
Sbjct: 4 AFKTVEPLEYYKRFLKENCQPDGRELGEFRATTVNIGSITT--ADGSALVKLGSTTVICGVKSELAAPAADSANKGYIVPNVELPSLCSERFRSGPPGEEAQAASQFIADMIENSQMIVKEDLCIANGKLAWVLYCDIXCLDYDGNLLDASVFALLAALKNVQLPSVI-INEETGLSEVNLKQKTPLIIRKHPVATSFAVFDNTVLIVDPTAKKEDLATGTVTTVTDEEGRLCSVHKPGGSLLTGAKLQDCITRAITRHKEVKKLIDKVIK 271
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: UPI0009E32917 (exosome complex component RRP43-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E32917) HSP 1 Score: 182 bits (463), Expect = 4.990e-53 Identity = 110/261 (42.15%), Postives = 153/261 (58.62%), Query Frame = 0
Query: 6 FQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFV---TEDTPTPLVVREVPVPLTCGVFDG-IIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQV 262
F+ P +YR+F+K VRPDGR L R ++VG +S + SALV LG+T V+ G+ + PS+ P G + V L PL SS+F G PSEQAQVLS FV + I + L +L I +G +W L +D++CLS+DGN+ DA L+A+M AL QL + ID+E +E+ PL +++ PV T GVFD ++ ADP+ EE LLT VT V T + K+ VHKPGGS +L EC + + K+V
Sbjct: 5 FKTAQPLEYYRQFLKEDVRPDGRALLEFRKTILNVGSIST--AEGSALVKLGNTTVVCGVKAEFAVPSQENPKHGFIVPNVDLPPLCSSRFRPGPPSEQAQVLSQFVADVISNCEPINLEELCIVEGKLSWVLYVDMMCLSYDGNITDACLVASMAALQNTQLYSVK-IDEETQTPVPSEEREVPLNLKKHPVSATFGVFDDTVLFADPTDEEENLLTGVVTVVVTDDDKIAAVHKPGGSPLPDDKLQECFKKAVRRGKEV 262
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: UPI000522B703 (exosome complex component RRP43 n=1 Tax=Opisthocomus hoazin TaxID=30419 RepID=UPI000522B703) HSP 1 Score: 183 bits (464), Expect = 9.430e-53 Identity = 103/273 (37.73%), Postives = 160/273 (58.61%), Query Frame = 0
Query: 3 VEAFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDG-IIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
VE + ++P +YRRF+K RPDGREL R +V++G ++ SALV LG+T V+ G+ ++ P+ ++ G + V+L L S++F SG P E+AQ S F+ + I S + DL I DG AW L DI+CL +DGN+ DA+ A + AL +QLP I++E ++E PL++R+ PV + +FD ++I DP+ EE+L T VT V+ EGK+C VHKPGGS +G +L +C+ K+V + ++ ++
Sbjct: 36 VEGKRTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITT--ADGSALVKLGNTTVICGVKAELAAPALDSANKGYIVPNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQIIAKEDLCIADGKLAWVLYCDIICLDYDGNILDASTFALLAALKNVQLPSVT-INEETGLSEVNLKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTVVTDEEGKLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIK 305
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: A0A8C4XQU8_FALTI (Ribosomal RNA-processing protein 43 n=2 Tax=Falco TaxID=8952 RepID=A0A8C4XQU8_FALTI) HSP 1 Score: 182 bits (461), Expect = 1.020e-52 Identity = 102/271 (37.64%), Postives = 160/271 (59.04%), Query Frame = 0
Query: 5 AFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDG-IIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
AF+ ++P +YRRF+K RPDGREL R +V++G ++ SALV LG+T V+ G+ ++ P+ ++ G + V+L L S+KF SG P E+AQ S F+ + I S + DL I +G AW L DI+CL +DGN+ DA+ A + AL +QLP I++E ++E PLV+R+ PV + +FD ++I DP+ EE+L + VT V+ EG++C VHKPGGS +G +L +C+ K+V + ++ ++
Sbjct: 4 AFKMVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGSITT--ADGSALVKLGNTTVVCGVKAELAAPAVDSANKGYIVPNVELPSLCSTKFRSGPPGEEAQAASQFIADVIENSQIIAKEDLCIANGKLAWVLYCDIICLDYDGNILDASAFALLAALKNVQLPSVT-INEETGLSEVNLKQKNPLVIRKHPVATSFAIFDDTLLIVDPTAEEEDLASGTVTVVTDEEGRLCSVHKPGGSPLTGDKLQDCITRAITRHKEVKKLIDKVIK 271
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: A0A7L0ZDC2_9PASS (Ribosomal RNA-processing protein 43 (Fragment) n=9 Tax=Neognathae TaxID=8825 RepID=A0A7L0ZDC2_9PASS) HSP 1 Score: 182 bits (461), Expect = 1.120e-52 Identity = 104/272 (38.24%), Postives = 158/272 (58.09%), Query Frame = 0
Query: 5 AFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVL-SEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDG-IIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
F+ ++P +YRRF+K RPDGREL R +V++G S SALV LG+T V+ G+ ++ P+ ++ G + V+L L S +F SG P E+AQ S F+ + I S +V DL I +G AW L DI+CL +DGNL DA++ A + AL +QLP I +E ++E TPL +R+ PV + +FD ++I DP+ EE+L T VT V+ EG++C VHKPGGS +G +L +C+ K+V + ++ ++
Sbjct: 4 CFRTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGNTGSITTADGSALVKLGNTTVICGVKAELAAPAADSSNKGYIVPNVELPSLCSERFRSGPPGEEAQAASQFIADVIENSQMIVKEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPSVI-ISEETGLSEVNLKQKTPLTIRKHPVATSLAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGGSPLTGAKLQDCINRAITRHKEVKKLIDKVIK 274
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Match: A0A7K4YTZ7_BUCAB (Ribosomal RNA-processing protein 43 (Fragment) n=53 Tax=Neognathae TaxID=8825 RepID=A0A7K4YTZ7_BUCAB) HSP 1 Score: 181 bits (460), Expect = 1.530e-52 Identity = 101/271 (37.27%), Postives = 157/271 (57.93%), Query Frame = 0
Query: 5 AFQRLDPENFYRRFVKNGVRPDGRELRAVRPISVDVGVLSEERVQASALVGLGSTKVLAGISLQVGHPSENTPMCGMLDVEVKLTPLSSSKFSSGRPSEQAQVLSTFVRNSIVESGALVLTDLAIDDGSFAWKLCMDIVCLSFDGNLADATLIAAMGALMRLQLPGTRRIDDEIFVTE---DTPTPLVVREVPVPLTCGVFDG-IIIADPSLLEEELLTTHVTAVSTAEGKVCGVHKPGGSCASGQQLNECLQLCQQHAKQVTQTLEAAVR 271
F+ ++P +YRRF+K RPDGREL R +V++G S SALV LG+T V+ G+ ++ P+ ++ G + V+L L S++F SG P E+AQ S F+ + I S + DL I +G AW L DI+CL +DGN+ DA+ A + AL +QLP I++E ++E PL +R+ PV + +FD ++I DP+ EE+L T VT V+ EG++C VHKPGGS +G +L +C+ K+V + ++ ++
Sbjct: 4 CFRTVEPLEYYRRFLKENCRPDGRELGEFRATTVNIGKCSITTADGSALVKLGNTTVICGVKAELAAPAVDSADKGYIVPNVELPSLCSTRFRSGPPGEEAQAASQFIADVIENSQIIAKEDLCIANGKLAWVLYCDIICLDYDGNILDASAFALLAALKNVQLPSVT-INEETGLSEVNLKQKNPLTIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDDEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIK 273 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6609.17456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig6609.17456.1 ID=prot_Ecto-sp13_S_contig6609.17456.1|Name=mRNA_Ecto-sp13_S_contig6609.17456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bpback to top |