mRNA_Ecto-sp13_S_contig12043.1745.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12043.1745.1
Unique NamemRNA_Ecto-sp13_S_contig12043.1745.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: D8LHP3_ECTSI (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP3_ECTSI)

HSP 1 Score: 574 bits (1480), Expect = 8.810e-189
Identity = 284/285 (99.65%), Postives = 284/285 (99.65%), Query Frame = 1
Query:    1 PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAE WGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG
Sbjct:  166 PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEAWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 450          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 492 bits (1267), Expect = 1.040e-156
Identity = 249/259 (96.14%), Postives = 252/259 (97.30%), Query Frame = 1
Query:   34 ADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFR 810
            ADYADGGIPDDVYAKANVTT+EKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGP VVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQ     +KEL+ R
Sbjct:    7 ADYADGGIPDDVYAKANVTTSEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPPVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQVA---LKELSIR 262          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A7R9YCL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCL4_9STRA)

HSP 1 Score: 432 bits (1112), Expect = 1.010e-146
Identity = 218/286 (76.22%), Postives = 240/286 (83.92%), Query Frame = 1
Query:    1 PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREP-HGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            P IAWNGDG+  DYA  GIP ++Y KANVT+AE+A   C RIGFPVMIKASEGGGGKGIR V     VAAAYRQV SE+PGSPIFVM+LAPRSRHLEVQLLAD YG AIALNGRDCSVQRRHQKIIEEGP V AS +VW  MER+AV LAK VGY NAGTVEYL++++   F+FLELNPRLQVEHPVTEMIT VNLPAAQLQVAMG+PLH IPDIR +YG E   G D IDF   +R P +GHCIAVR+TAENPDQGF+PTSG I+ELNFRSTP+VWGYFSVDSSG
Sbjct:  160 PCIAWNGDGIFTDYAKDGIPPELYEKANVTSAEQALAECRRIGFPVMIKASEGGGGKGIRKVLAEDAVAAAYRQVVSEIPGSPIFVMKLAPRSRHLEVQLLADHYGNAIALNGRDCSVQRRHQKIIEEGPPVAASPDVWVKMERAAVSLAKTVGYANAGTVEYLFTVEDGKFYFLELNPRLQVEHPVTEMITGVNLPAAQLQVAMGIPLHRIPDIRMLYGCEDLFGEDPIDFDTAQRIPPKGHCIAVRVTAENPDQGFKPTSGGIQELNFRSTPNVWGYFSVDSSG 445          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA)

HSP 1 Score: 453 bits (1166), Expect = 7.350e-143
Identity = 224/285 (78.60%), Postives = 249/285 (87.37%), Query Frame = 1
Query:    1 PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            P I WNGDGL  +Y + GIP +VY+KANVT+ E+A + CER+GFPVMIKASEGGGGKGIR V EA  VAAA+RQVASEVPGSPIFVM+LAPRSRHLEVQLLAD YG+AIALNGRDCSVQRRHQKIIEEGP VVA A++W +ME++A+ LAK+VGY NAGTVEYLY+ +   F+FLELNPRLQVEHPVTEMIT+VNLPAAQLQVAMG+PLHMIPDIR +YG E  GT  IDF N ER P   HCIAVRITAENPDQGFQPTSGTI+ELNFRSTPDVWGYFSVDSSG
Sbjct:  122 PCIGWNGDGLLTNYKEAGIPPEVYSKANVTSTEQAQDVCERLGFPVMIKASEGGGGKGIRKVLEAGAVAAAFRQVASEVPGSPIFVMKLAPRSRHLEVQLLADVYGQAIALNGRDCSVQRRHQKIIEEGPPVVAPADIWRSMEQAAISLAKEVGYSNAGTVEYLYTEEDNKFYFLELNPRLQVEHPVTEMITRVNLPAAQLQVAMGIPLHMIPDIRTLYGCERLGTSAIDFDNTERLPPSAHCIAVRITAENPDQGFQPTSGTIEELNFRSTPDVWGYFSVDSSG 406          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A7S2V2G8_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G8_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 3.360e-138
Identity = 220/287 (76.66%), Postives = 244/287 (85.02%), Query Frame = 1
Query:    1 PTIAWNGDGLHADY--ADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            P IAWNGDGL  DY  A G +PD+VY++ANVTTAE+A   CERIGFPVMIKASEGGGGKGIR V E+  VAAAYRQV  E+PGSPIFVM+LAP+SRHLEVQL+ DTYG AIALNGRDCSVQRRHQKIIEEGP + AS E W  ME++AV +AK+VGY NAGTVEYL+++  K F+FLELNPRLQVEHPVTEMITKVNLPA+QLQVAMGLPLH IPDIR +YGR+  GT  IDF  EER P  GHCIAVRITAENPD GFQPTSG I+ELNFRSTP VWGYFSV+SSG
Sbjct:  177 PCIAWNGDGLEVDYQAAGGVVPDEVYSQANVTTAEQAESVCERIGFPVMIKASEGGGGKGIRKVLESKEVAAAYRQVQGEIPGSPIFVMKLAPQSRHLEVQLICDTYGNAIALNGRDCSVQRRHQKIIEEGPPLAASPEDWKKMEQAAVNMAKEVGYANAGTVEYLFTVQDKKFYFLELNPRLQVEHPVTEMITKVNLPASQLQVAMGLPLHNIPDIRALYGRDYFGTTPIDFDKEERMPPHGHCIAVRITAENPDTGFQPTSGLIEELNFRSTPQVWGYFSVNSSG 463          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A0B4L7U5_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7U5_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 6.610e-131
Identity = 206/285 (72.28%), Postives = 238/285 (83.51%), Query Frame = 1
Query:    1 PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            P IAWNG+G+  DYA GG+ D+VYA+ANV +AE A +A   IG+PVM+KASEGGGGKGIR V +A  + + +RQV  EVPGSPIFVM+LAP SRHLEVQLLAD +G+AIALNGRDCS+QRRHQKIIEEGP V A   VW  MER+AV+LAK+VGY NAGTVEYL++ + K F+FLELNPRLQVEHPVTEMIT VNLPAAQLQVAMG+ LH IPDIR++YG +P G+  IDF   ER P   HCIAVR+TAENPD GF+PTSGTI+ELNFRSTPDVWGYFSVDSSG
Sbjct:  173 PVIAWNGNGIVCDYAAGGLSDEVYARANVLSAEAALKAAAEIGYPVMVKASEGGGGKGIRKVEDADTMPSLFRQVQGEVPGSPIFVMKLAPASRHLEVQLLADAHGQAIALNGRDCSIQRRHQKIIEEGPPVAAPPTVWKEMERAAVKLAKEVGYVNAGTVEYLFTNEDKTFYFLELNPRLQVEHPVTEMITHVNLPAAQLQVAMGIALHRIPDIRRLYGLDPLGSSPIDFDTAERVPPTNHCIAVRVTAENPDMGFKPTSGTIQELNFRSTPDVWGYFSVDSSG 457          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A7S4I9K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I9K0_9STRA)

HSP 1 Score: 391 bits (1005), Expect = 1.530e-130
Identity = 201/290 (69.31%), Postives = 231/290 (79.66%), Query Frame = 1
Query:    1 PTIAWNGDGLHADY--ADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGRE--PHGTD-HIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            P I WNG  + A+Y  + G +P+  Y+ A V +A +A+EA E++GFPVMIKASEGGGGKGIRMV     V  AYRQV  EVPGSPIF+M+L+ RSRHLEVQLLAD YG+A+ALNGRDCSVQRRHQKIIEEGP V  S EVW  MER+AV LAK VGY NAGTVEYLYS   + F+FLELNPRLQVEHPVTEMIT+VNLPAAQLQVAMG+PL  IP+IR++YG++    G D  IDF N ER    GHCIAVRITAEN + GF+PTSG I+ELNFRSTP VWGYFS+DSSG
Sbjct:  193 PCIGWNGSHVLAEYDRSTGCLPEQAYSDATVGSATEASEAAEKVGFPVMIKASEGGGGKGIRMVDRPEDVQTAYRQVCGEVPGSPIFIMKLSSRSRHLEVQLLADEYGDAVALNGRDCSVQRRHQKIIEEGPPVATSPEVWAEMERAAVALAKAVGYTNAGTVEYLYSEPDQKFYFLELNPRLQVEHPVTEMITRVNLPAAQLQVAMGIPLRHIPEIRELYGKKRFEDGIDTSIDFDNAERIAPHGHCIAVRITAENAEAGFKPTSGGIQELNFRSTPSVWGYFSMDSSG 482          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A662XZ01_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZ01_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 1.030e-128
Identity = 200/290 (68.97%), Postives = 232/290 (80.00%), Query Frame = 1
Query:    1 PTIAWNGDGLHADY-ADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKD----FFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            PTIAWNGDG+  DY A  GIP+++Y  A +   E   E C+RIGFPVMIKASEGGGGKGIR V E + V +A+  V  E+PGSPIFVM+LAP+SRHLEVQLLADTYG AIAL+GRDCSVQRRHQKI+EEGP +  S EVW  M R+A +LA++V Y NAGTVEYL+S   +D    FFFLELNPRLQVEHPVTEMIT VNLPAAQLQVAMG+PLH IPD+R++Y ++  GT  IDF  E++ P  GH IA RITAE+P+ GFQPTSG I+ELNFRSTPDVWGYFSVDSSG
Sbjct:    2 PTIAWNGDGMEVDYKAHDGIPEEIYNAAMLRDGEHCLEECKRIGFPVMIKASEGGGGKGIRKVQEESQVMSAWEAVRGEIPGSPIFVMKLAPKSRHLEVQLLADTYGNAIALSGRDCSVQRRHQKIVEEGPVLAPSQEVWEKMMRAATRLAQEVEYVNAGTVEYLFSELPEDNGNSFFFLELNPRLQVEHPVTEMITHVNLPAAQLQVAMGIPLHCIPDVRRLYMKDGFGTAPIDFEVEKQAPPHGHVIAARITAEDPNAGFQPTSGAIEELNFRSTPDVWGYFSVDSSG 291          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: T0S3K5_SAPDV (Acetyl-CoA carboxylase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3K5_SAPDV)

HSP 1 Score: 388 bits (996), Expect = 7.620e-128
Identity = 192/290 (66.21%), Postives = 224/290 (77.24%), Query Frame = 1
Query:    1 PTIAWNGDGLHADYAD-GGIPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYS----MDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG 855
            PTI+WNGDG+  +Y     IPD++Y  A++   +   E C RIGFPVMIKASEGGGGKGIR +     V A Y  V  E+PGSPIFVM+LAP+SRHLEVQLLAD YG AIAL+GRDCSVQRRHQKIIEEGP +  +  VW  M  +A +LAK+V Y NAGTVEYL++     D  +FFFLELNPRLQVEHPVTEMIT VNLPA QLQVAMG+PLHMIPD+R++Y ++ HG   IDF  E++ P  GH IA RITAE+P+ GFQPTSG I+ELNFRSTPDVWGYFSVDSSG
Sbjct:  176 PTISWNGDGITVNYKTLNSIPDEIYEAASIKDVDHCVEQCARIGFPVMIKASEGGGGKGIRKITRPEDVVAGYTAVQGEIPGSPIFVMKLAPKSRHLEVQLLADEYGNAIALSGRDCSVQRRHQKIIEEGPVLAPTEAVWDEMMLAATRLAKEVDYVNAGTVEYLFTETPDADGNNFFFLELNPRLQVEHPVTEMITGVNLPACQLQVAMGIPLHMIPDVRRLYNKDSHGKSPIDFEKEKQLPPHGHVIAARITAEDPNAGFQPTSGAIEELNFRSTPDVWGYFSVDSSG 465          
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Match: A0A7S3PDY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PDY9_9STRA)

HSP 1 Score: 375 bits (964), Expect = 1.490e-127
Identity = 192/280 (68.57%), Postives = 221/280 (78.93%), Query Frame = 1
Query:    1 PTIAWNGDGLHADYADGG-IPDDVYAKANVTTAEKAAEACERIGFPVMIKASEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQLLADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLAKKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQLQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITAENPDQGFQPTSGTIKELNFRSTPDVWGYF 837
            PTIAWNG  L  DY +   IP ++Y +ANV ++++  E  +++G PVMIKASEGGGGKGIR V     V  AYRQV SE+PGSPIFVMRLA  SRHLEVQLLAD YG AIAL+GRDCSVQRRHQKI+EEGP + A   VW  M  +AV+LAK+VGY NAGTVEYL+  D  +FFFLELNPRLQVEHPVTEMIT VNLPAAQL VAMG+PL  I DIR +YGREP+ +  IDF NEE+ P QGHCIA RITAENP +GFQPTSG I+ELNFRS+ +VWGYF
Sbjct:   75 PTIAWNGQDLTVDYKESNCIPQELYDQANVKSSQECLEQVKKLGLPVMIKASEGGGGKGIRKVISLDEVETAYRQVTSEIPGSPIFVMRLASASRHLEVQLLADNYGNAIALSGRDCSVQRRHQKILEEGPPIAAPPAVWKKMCAAAVRLAKEVGYINAGTVEYLFCND--EFFFLELNPRLQVEHPVTEMITGVNLPAAQLNVAMGIPLQHIADIRTLYGREPYSSGDIDFDNEEQRPPQGHCIAARITAENPYEGFQPTSGQIQELNFRSSRNVWGYF 352          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12043.1745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHP3_ECTSI8.810e-18999.65Acetyl-CoA carboxylase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K608_9PHAE1.040e-15696.14Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A7R9YCL4_9STRA1.010e-14676.22Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835YMY6_9STRA7.350e-14378.60Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2V2G8_9STRA3.360e-13876.66Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica... [more]
A0A0B4L7U5_9STRA6.610e-13172.28Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochl... [more]
A0A7S4I9K0_9STRA1.530e-13069.31Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A662XZ01_9STRA1.030e-12868.97Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
T0S3K5_SAPDV7.620e-12866.21Acetyl-CoA carboxylase n=1 Tax=Saprolegnia diclina... [more]
A0A7S3PDY9_9STRA1.490e-12768.57Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12043contigEcto-sp13_S_contig12043:145..4981 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score577.8
Seed ortholog evalue2.8e-162
Seed eggNOG ortholog2880.D8LHP3
Preferred nameACACB
Model size858
KEGG rclassRC00040,RC00253,RC00367
KEGG koko:K01946,ko:K11262
KEGG ReactionR00742,R04385,R04386
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04920,ko04922,ko04931,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04920,map04922,map04931
KEGG ModuleM00082
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001101,GO:0001650,GO:0001676,GO:0001894,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003989,GO:0004075,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006084,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006163,GO:0006164,GO:0006355,GO:0006606,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006853,GO:0006869,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006998,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009374,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010256,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0010876,GO:0010883,GO:0010884,GO:0010906,GO:0012505,GO:0014070,GO:0015031,GO:0015629,GO:0015711,GO:0015718,GO:0015833,GO:0015849,GO:0015908,GO:0015909,GO:0015980,GO:0016020,GO:0016043,GO:0016053,GO:0016421,GO:0016874,GO:0016879,GO:0016885,GO:0017038,GO:0017076,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019432,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0019867,GO:0019899,GO:0019900,GO:0019904,GO:0022607,GO:0030554,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031406,GO:0031667,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031998,GO:0031999,GO:0032365,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032810,GO:0032870,GO:0032879,GO:0032989,GO:0033036,GO:0033218,GO:0033293,GO:0033365,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034285,GO:0034504,GO:0034613,GO:0034641,GO:0034654,GO:0034694,GO:0034695,GO:0035257,GO:0035337,GO:0035383,GO:0035384,GO:0035639,GO:0036094,GO:0040008,GO:0040029,GO:0042175,GO:0042221,GO:0042493,GO:0042592,GO:0042759,GO:0042802,GO:0042886,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044042,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045017,GO:0045184,GO:0045540,GO:0045833,GO:0045893,GO:0045922,GO:0045927,GO:0045935,GO:0046320,GO:0046322,GO:0046390,GO:0046394,GO:0046460,GO:0046463,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046890,GO:0046907,GO:0046942,GO:0046949,GO:0046966,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050662,GO:0050692,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051427,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0055086,GO:0055088,GO:0055114,GO:0060249,GO:0060255,GO:0060420,GO:0060421,GO:0061024,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071324,GO:0071329,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071495,GO:0071616,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072594,GO:0080090,GO:0090181,GO:0090407,GO:0097009,GO:0097066,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0098588,GO:0098656,GO:0098805,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901654,GO:1901655,GO:1901681,GO:1901700,GO:1901701,GO:1902001,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1903825,GO:1905039,GO:1905952,GO:1905954,GO:1990542,GO:1990837,GO:2000026,GO:2000112,GO:2001141,GO:2001293,GO:2001295
Exons8
EggNOG free text desc.acetyl-CoA carboxylase
EggNOG OGsCOG0439@1,KOG0368@2759
EC2.1.3.15,6.3.4.14,6.4.1.2
Cds size858
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12043.1745.1prot_Ecto-sp13_S_contig12043.1745.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12043 145..4981 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462639.747212-CDS-Ecto-sp13_S_contig12043:144..2281681462639.747212-CDS-Ecto-sp13_S_contig12043:144..228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 145..228 -
1681462639.7639341-CDS-Ecto-sp13_S_contig12043:723..7971681462639.7639341-CDS-Ecto-sp13_S_contig12043:723..797Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 724..797 -
1681462639.7737477-CDS-Ecto-sp13_S_contig12043:1177..12981681462639.7737477-CDS-Ecto-sp13_S_contig12043:1177..1298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 1178..1298 -
1681462639.7837303-CDS-Ecto-sp13_S_contig12043:2090..22131681462639.7837303-CDS-Ecto-sp13_S_contig12043:2090..2213Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 2091..2213 -
1681462639.79373-CDS-Ecto-sp13_S_contig12043:2633..27681681462639.79373-CDS-Ecto-sp13_S_contig12043:2633..2768Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 2634..2768 -
1681462639.8035426-CDS-Ecto-sp13_S_contig12043:3246..33841681462639.8035426-CDS-Ecto-sp13_S_contig12043:3246..3384Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 3247..3384 -
1681462639.8135152-CDS-Ecto-sp13_S_contig12043:3839..39891681462639.8135152-CDS-Ecto-sp13_S_contig12043:3839..3989Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 3840..3989 -
1681462639.8230712-CDS-Ecto-sp13_S_contig12043:4948..49811681462639.8230712-CDS-Ecto-sp13_S_contig12043:4948..4981Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12043 4949..4981 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12043.1745.1

>prot_Ecto-sp13_S_contig12043.1745.1 ID=prot_Ecto-sp13_S_contig12043.1745.1|Name=mRNA_Ecto-sp13_S_contig12043.1745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=286bp
PTIAWNGDGLHADYADGGIPDDVYAKANVTTAEKAAEACERIGFPVMIKA
SEGGGGKGIRMVGEATGVAAAYRQVASEVPGSPIFVMRLAPRSRHLEVQL
LADTYGEAIALNGRDCSVQRRHQKIIEEGPAVVASAEVWGNMERSAVQLA
KKVGYCNAGTVEYLYSMDAKDFFFLELNPRLQVEHPVTEMITKVNLPAAQ
LQVAMGLPLHMIPDIRQMYGREPHGTDHIDFANEERPPAQGHCIAVRITA
ENPDQGFQPTSGTIKELNFRSTPDVWGYFSVDSSG*
back to top

mRNA from alignment at Ecto-sp13_S_contig12043:145..4981-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12043.1745.1 ID=mRNA_Ecto-sp13_S_contig12043.1745.1|Name=mRNA_Ecto-sp13_S_contig12043.1745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12043:145..4981- (Ectocarpus species13 EcNAP12_S_4_19m)
CCAACGATCGCCTGGAACGGCGACGGCCTCCACGTGAGTGGTCGTTTTGG GGGAGACCGGCAGTCGTCGGTGGTGGTTGGGACGTTAAGTCTCTTAGAAC GGGTGTGTCGTGGTCTTGGCACAGGCTTGCTTTTTGGGGGTTTAAAGAAG TACTTCGAAGTATATAATTTTATAACTGGTATACCCCACCCCCGATTTCA GGTATACCCAATATCTAGTTCTGTCTAGCTCTCTGGGAGCGGGCGGGTCA TGGTATTTTGCAACCGCAGTCATTCTTGGCGGTGGTATGCATATGCACTG CTTTTGTAGCTCTCTGGGAGGGGGTGGGTCATGGCCTGCGGCAAGACCGG CATGTTTCCGGCGGTGGTCTTGTGTACTGCTGTTTAGCTCTGCGGGCAAC CGGTGGGTCATGACCGCCCCCTGCGCATGGTTCCTCGTTACAACCGTCGA GGGAAGGATGAAAAGCCTTTCCTCGCATGCGTGGTGCATGGCGTAACACG TGCTATCGAGCCACATTGCGTAGTGTAGCTCCCCTGGCAACGGTGGCATC ACCACAACCCGCCCGCGTTGCGGTGACGGTCTGAAAGCTTGGCCGGGTTG CCCTTGACAAGTTCATGACGGTAACGCTTTTTTCTCCTCAGAGATTTAGC AGCTTCCCGCTCGTGCGGGTGATGAGGACTTCCTTGCTCGTGTTGCTCGA TAAAACGATCATCCACACATATGTCCACAAGCACAATTGTTGTGCATGTT CCCTGCTTGGGGGACTTTATTGGCTTGTGGCCACGGAAGGCGTCCGCGTC AGTTTCACCTGCTGTGCGGATGTTGAGAGGGCGCGGAGCAGAGGTCGGAA CGTGTTTGATATGTCAAGACAACAACAACAACAACAACAGCATCAACAAC ACCAACAACACCAACCACAAACCACCACCACTACCACCACTGCTTCGTTC TCATGGTTCTGTTTCGACTATACCGTATGCGTCGTTCAACAGGCGGACTA CGCAGACGGCGGCATCCCCGACGACGTGTACGCAAAGGCCAACGTTACCA CGGCCGAGAAGGCGGCGGAGGCTTGCGAGCGCATCGGGTTTCCGGTGATG ATCAAGGCGTCGGAAGGGGGCGGGGGCAAGGGCATCCGCATGGTGAGCAA CAAACGCCGTCATGTTTGTTATGGTTGGCGTCGTCTACGCAGGGAGGAGA GGGTGGATTTGTGGGAATGCGGGGGGGGGGGCATCGCGAGGCCGTTGGCA AAGTAGTGTGTGTTTGTTCGATTGTAGATTCGGCCAAGGTGTGGAACGCG TAGGGTTAGCCCGGGTGTGGTGCGAACAACGGTTGTTCCCCCACACACCC TCTTCGCGTGCCTGCCACGTCTTATTCATCGTGGCACGTCTTTTTGATAG TGGCACAGCCAATGATATCGCATATGATCGCAGCAACCCTTTCAGTCGCA TGCCTATTTTTTTTTTGTGGATGCGCCGGCGGTCGACTGCTGCATCGTTA CAACGCTTTCACGGCTGCTGCACAGATTTTGTTCGGATGAAGGCCACTAT ATTTTGTTTTTTTTGTGCACCGGCGGCGTCCGGATGCTGTGTCGCAGGTA GGGGAGGCGACGGGCGTGGCGGCGGCATACCGGCAGGTGGCGTCGGAAGT CCCCGGCTCCCCCATCTTCGTCATGCGCCTCGCGCCCCGATCGAGGCACC TGGAGGTCCAGCTCCTGGCCGACACCTACGGCGAGGTGTGCATTACTGTA CAGTGTGGTAACAGAGTAGCCCTTAGGCAGGCAACGTTATCGTTTGGTAG GTTGAATCGTATGCACACGATAACGGGGACTGGTTTTTAACAGCTCGAAT ACTGCTCCTCAGCAACAAAACACAACAGCAGTGCCGGTGCCCGAAATTGG CGGCGTTGCGACCGTCTTTCGTCGAGGGCTTTCCGAAAACGCGTCGTTTC ATTTCGGCGTCCTCTTTTTTGTCACGGAGAAATGGACCCTTTGAAGGATC GATCCAGCGGGCGGTGATATCTTTCGCAACCTATGGTTCAGCTATTGTGC ACGCGCGAACACTATTTCTTGCTGGGGGGACGTTGCGTCCTTTCATTTTC GCAATGTCGTGTGTATCGTGGACGCACGCTGTTTGTTTTTGGTCGTCGTT CGAAATTTTGCTTTTTGTTTTTTCGGGCGGGCGTTTGGGGGGATGCGTCG GGGCCAACCGCAGGCGATCGCTCTTAACGGACGAGACTGCTCAGTTCAGA GGCGCCACCAGAAGATTATCGAGGAGGGCCCGGCTGTCGTGGCTTCCGCG GAGGTGTGGGGGAACATGGAGAGGTCTGCGGTGCAGCTCGCGAAGAAGGT GTGCGTGTGTTTGTGATACGTAGCTGTTCGCATCGGCCGCGCGATGTGTA TCTGGCTGATCGATGTAGACATCCTTGTGTGTTGTGTGTTGTGTGTGGGT GCGTGTGTCTTCTTTTCTTGGCTGGCATCGACCGCGCTAATCGGCTGACA AATTACGTCAGTATTTTAACGGGATAAAAAAACACGAACGTTTTCTAGTT GAAGGGTACGGGTGTGTGTGTGATAGCTTGCATCGACCGGGCTATGTATA CTCGTCTGACCAATGAAGAGGCCTCAAGTGTTTGTGCGTTCTCTCTGTGT GTGTGTGTGTGTGTTTCTGTGTTTTTTGGGTGTTGTTGATTTGGCACGGA CCACGCTTTACGGCCCTCATTTGTGGGATGTTATCGTTGCTGGTGTTGTG CTTGATTCCCCCTCAAAGGTGGGGTATTGCAACGCGGGGACGGTGGAGTA CCTGTACTCGATGGACGCCAAGGACTTCTTCTTCCTGGAGCTAAACCCTC GCCTGCAGGTGGAGCACCCCGTCACGGAGATGATCACCAAGGTGCGGAGG CGTGTTCCGGCGTAAGAAAAACGGACCTGGTAGATTATACGTAGTACGAA AGCACGCCAAGGTTTGTGGTACGGAGGCGCGTGCGTGCTTGATAAAAAGC ACGAAAGCACCTAGATAAACAAAATAGCACGAAAGCATACCAAGGTCTGT GGTACGGAGGCGTGTTCGTGCGTAAGAAAGAGCACGAAAGCATCGTGGTG TTTCGTGAGGCTCACGCATGGTGTTTTGATTCGTGCGCAATAAAAAAACA CGACAGCATCGTGATGATTTGTGATATTTCTGCATGGGTGTTTTTGTGTG ACGAGATGAGGCAGGCATCCTGTGGACCGGGGAGGGGCTACAAGAGCTCT CGGCAGAAACAGATGCTGTTACATAATTCAGACAGTGTCCACAAGATGTC GTATTTTGTGTTGTGTCACAGGGGCGAGTGCAATGAGTAGAGGATGAATC TGTTGGCGATCAGTTATTACGGCAGCAGGAACACCAAGAAACCCTATAAA AGTGGTGGTTTGCACGTTGAGGAGTTACAATGAAGATGAGCTCCGACGGC GTGCTGCGGTTTGGTCGCACTGCATAAGAGTAATCTCACTTGAGGTTTAT GTTAACATAAACGTCTCCCGTTCGGGCGTCTCCTTGTCCCCCACCACCAC CAACTCCGCTACTACATTTACCGCCACTGCTACCGCTCCTGCTCCTGCTC CTGCTCCTGCTTCTTCAACCGCTGCTTCTACATCTACTGCTACCGCTACC GCTACCGCTACCGCTACCGCTACCGCTACAAAGGTAAACCTGCCGGCAGC GCAGCTCCAGGTGGCCATGGGTCTCCCCCTCCACATGATCCCGGACATCC GCCAGATGTACGGCCGCGAGCCTCACGGCACCGACCATATCGACTTCGCA AACGGTGAGAGGGGGAGAGACGCGAGGAAGTTGTCTCCAAGCACGAAGCG GGAAATGAGTATATCAAAACGAACGCCTTCGGGGGAGTGGTTCCAGCTCT TGTGCTTCCAGGGGGGCGGACCGTAACCGTACATAGATTAGGAACGTTAA CGCTTGATTTGACAGTTGCCGATGACGCATTTTTTTCGTGATGCGCATAA AAGGTCACCCCACAAAGCAGCACACTCAGCAGAGCGTACGTACGCGCGGT ACGATATTTTGTTGATACCCCTTGTTCCCTCCTCTCCTTTTCGTCACCCC ATCCCTGCCTTTCCGGTCTCCTTTGCCACCCTCCCGCTCGTTCTTTTTTT TTTTTTGGTGATCGTTCTTCTTTTTTTCTCGCAGAGGAACGGCCACCGGC GCAGGGCCACTGCATCGCCGTCCGTATCACCGCCGAGAATCCCGACCAGG GTTTCCAGGTAAGCGCTAGCATCTCATGTAGTTCGTTACTCCATGCGTAA CCGTTGCTCGCAGTTTCAACTCACCACCTTTTATTGCCCTCCCTCCTCCA CGGGGGAGACACTGGAGACATGCCGGTGGTGCGTGTTTGACTACGATGTC ATTCACGATACTCACTTGTTCAATGATAAAGGGGGCTGGGGTTGCCGTGT GCACCAGGACAAGGAACGGCGGTTAGGCTATAATCCGTATCCGTCAGCGG TGGGCCAATTTAGTGGAAGGTTCTTGTGTGGATATTGTCTCCTCGTTCAT TTTCGCCTCGCATCCCCCCTTGCTCCGACGCCCGCTTTCCCGCCCCCGTC CCACCTACCTAAACGTTGGGACGCGATGATTTGCTGCACACCTTGGATGT AACGCGATGGGGTCGTGCGATGCGGTGGGATCGGAATTGTCAACGCGGCG CGATGGGTGCGGTGGTGTTGAACGACGAATCCTATTCGGCGCTTGGAACA TAGCCCACCAGCGGCACGATCAAGGAGCTCAACTTCCGCTCCACGCCGGA CGTGTGGGGATACTTCAGCGTGGACAGCTCGGGGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12043:145..4981-

>mRNA_Ecto-sp13_S_contig12043.1745.1 ID=mRNA_Ecto-sp13_S_contig12043.1745.1|Name=mRNA_Ecto-sp13_S_contig12043.1745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=858bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12043:145..4981- (Ectocarpus species13 EcNAP12_S_4_19m)
CCAACGATCGCCTGGAACGGCGACGGCCTCCACGCGGACTACGCAGACGG
CGGCATCCCCGACGACGTGTACGCAAAGGCCAACGTTACCACGGCCGAGA
AGGCGGCGGAGGCTTGCGAGCGCATCGGGTTTCCGGTGATGATCAAGGCG
TCGGAAGGGGGCGGGGGCAAGGGCATCCGCATGGTAGGGGAGGCGACGGG
CGTGGCGGCGGCATACCGGCAGGTGGCGTCGGAAGTCCCCGGCTCCCCCA
TCTTCGTCATGCGCCTCGCGCCCCGATCGAGGCACCTGGAGGTCCAGCTC
CTGGCCGACACCTACGGCGAGGCGATCGCTCTTAACGGACGAGACTGCTC
AGTTCAGAGGCGCCACCAGAAGATTATCGAGGAGGGCCCGGCTGTCGTGG
CTTCCGCGGAGGTGTGGGGGAACATGGAGAGGTCTGCGGTGCAGCTCGCG
AAGAAGGTGGGGTATTGCAACGCGGGGACGGTGGAGTACCTGTACTCGAT
GGACGCCAAGGACTTCTTCTTCCTGGAGCTAAACCCTCGCCTGCAGGTGG
AGCACCCCGTCACGGAGATGATCACCAAGGTAAACCTGCCGGCAGCGCAG
CTCCAGGTGGCCATGGGTCTCCCCCTCCACATGATCCCGGACATCCGCCA
GATGTACGGCCGCGAGCCTCACGGCACCGACCATATCGACTTCGCAAACG
AGGAACGGCCACCGGCGCAGGGCCACTGCATCGCCGTCCGTATCACCGCC
GAGAATCCCGACCAGGGTTTCCAGCCCACCAGCGGCACGATCAAGGAGCT
CAACTTCCGCTCCACGCCGGACGTGTGGGGATACTTCAGCGTGGACAGCT
CGGGGTAG
back to top