prot_Ecto-sp13_S_contig12041.1744.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12041.1744.1
Unique Nameprot_Ecto-sp13_S_contig12041.1744.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length479
Homology
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A6H5KUQ8_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ8_9PHAE)

HSP 1 Score: 858 bits (2218), Expect = 1.700e-310
Identity = 440/478 (92.05%), Postives = 452/478 (94.56%), Query Frame = 0
Query:    1 MEGSRNIDGVRQGGGGERQGDENKEKSTARCQAEGAHVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKKSTTSSQRRVSEWRNVAMPSEAQTGGQMQYVMMPSAHHMNPQLTPSAAPMMESTIPIMDMPRSPTCLLQYCPGFVPINPLHGLPVQQQWPSQQVPLLEPWRFPGSDGLQVLHARLSGRMAPAQQMYGHPFLLQPAFSMPPPVPLAAEGLSQQPFPVSMAAPSIVAATGPDYSVRGCPSGTSGANDASIAPGAVTETASAEASAGTLQSPTQNGQPQPLSETAMAFNADDELALANTLLSLSLEEQANVGAGFSGGRQVWGSRGQLNEFDVLRGFGTYDVGLGSQHMTNNGKLDGSVSSNGVLPEGYHRKEATDSSQLLQAPERPQQALEREVGDTSREGCP 478
            MEGSRNIDGVRQ GGGERQGDENKEKSTARCQAEGA VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGR+GKQCRERWFNHLDPTLKKSSWTPEEDEILV GQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKKSTTSSQRRVSEWRNVAMPSEA+TGGQMQYVMMPSA HMNPQLTP+AAPMM +TIPIMDMPRSPTCLLQ+CPG +PI PLHG+PVQQQWPSQQ+PLLE  RFPGS+GLQ LHARL GRMA AQQMYG PFLLQP FSMPPPVPL AEGLSQQPFPVSMAAPSIVAATGPDYSVR CPSGTSGA+  SIAPGAVTETA AEASAG+LQSP QNGQPQPLSET MAFN DDELALANTLLSLSLEEQANVGAGFSGGRQVWG RGQLNEFDVLRGFGTYDVGLGS HMT+NGKLDGSVS NGVLPEGYHRKEATDSSQLLQAP RPQQALEREVGDTSREGCP
Sbjct:  162 MEGSRNIDGVRQRGGGERQGDENKEKSTARCQAEGALVKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRVGKQCRERWFNHLDPTLKKSSWTPEEDEILVQGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKKSTTSSQRRVSEWRNVAMPSEARTGGQMQYVMMPSARHMNPQLTPAAAPMMGTTIPIMDMPRSPTCLLQHCPGIMPIYPLHGMPVQQQWPSQQIPLLESSRFPGSNGLQELHARLYGRMALAQQMYGQPFLLQPVFSMPPPVPLTAEGLSQQPFPVSMAAPSIVAATGPDYSVRECPSGTSGASGVSIAPGAVTETAFAEASAGSLQSPAQNGQPQPLSETEMAFNVDDELALANTLLSLSLEEQANVGAGFSGGRQVWGRRGQLNEFDVLRGFGTYDVGLGSAHMTHNGKLDGSVSRNGVLPEGYHRKEATDSSQLLQAPVRPQQALEREVGDTSREGCP 639          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A7S2RZ51_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ51_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.320e-44
Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKK 138
            VKGPWT EEDQIIIDCI   +T+WSEIAER+ GRIGKQCRERWFNHLDP+LKK  WT EED +LV  Q+++GNSWTKIAKLLPGRSENAVKNRWNSA R++
Sbjct:  307 VKGPWTKEEDQIIIDCIEAGITKWSEIAERIPGRIGKQCRERWFNHLDPSLKKGGWTEEEDAVLVEAQSKWGNSWTKIAKLLPGRSENAVKNRWNSATRRR 407          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO)

HSP 1 Score: 166 bits (419), Expect = 1.290e-42
Identity = 72/101 (71.29%), Postives = 85/101 (84.16%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKK 138
            VKGPWTTEEDQ+I++CIN  +T+WSEI+ER+ GRIGKQCRERWFNHLDP++KK  W+ EED IL   Q   GN W +IAKLLPGRSEN+VKNRWNSA R+K
Sbjct:   61 VKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRRK 161          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A7S2SVF3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 5.550e-42
Identity = 74/100 (74.00%), Postives = 84/100 (84.00%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARK 137
            VKG WT EEDQIIIDCI   + RWSEIAE + GR+GKQ RERWFNHLDPT+KK SWT EED IL   QAR+GNSWTKIA+LLPGR+EN +KNRWNSA+R+
Sbjct:   91 VKGTWTKEEDQIIIDCIEAGINRWSEIAEYIPGRVGKQARERWFNHLDPTIKKGSWTDEEDAILTVAQARWGNSWTKIARLLPGRAENTIKNRWNSASRR 190          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: F0Y4D5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4D5_AURAN)

HSP 1 Score: 153 bits (386), Expect = 2.360e-41
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSA 134
            VKG +T EED+III+C+ E   RW +IAER+ GRIGKQCRERW NHLDP LKK  WT EED ILV  Q RFGN+WTKIA+LLPGR+E+AVKNRWNSA
Sbjct:   19 VKGAFTEEEDKIIIECMREGGLRWMQIAERIPGRIGKQCRERWTNHLDPNLKKGGWTREEDAILVEAQQRFGNAWTKIAELLPGRAESAVKNRWNSA 115          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.730e-39
Identity = 73/101 (72.28%), Postives = 84/101 (83.17%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKK 138
            VKGPWT EED +I  CI  K+T+WSEIAER+ GRIGKQCRERWFNHLDPT+  S+WT EE+++LV  QA FGN W +IAKLLPGR ENAVKNRWNSA R+K
Sbjct:  225 VKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRRK 325          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A7S4DB75_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB75_HETAK)

HSP 1 Score: 151 bits (382), Expect = 9.010e-39
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAA-RKKSTTSSQRRVSEWRNVAMPSEAQTGG 163
            VKG WT EED +I+ C+   + +WS+IAER+ GRIGKQ RERWFNHLDP LKK  W+PEED +L   QAR+GN+WTKIA+LLPGRS+N++KN WNS+  R+K     +      R  A+P+E Q  G
Sbjct:  132 VKGAWTKEEDAVIVACMESGIKKWSKIAERIPGRIGKQVRERWFNHLDPHLKKGGWSPEEDAVLAEAQARWGNAWTKIARLLPGRSDNSIKNHWNSSTVRRKVDGVMEHLARAHREGALPAEVQALG 258          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.650e-37
Identity = 67/107 (62.62%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   35 GAHVKGPWTTEEDQIIIDCI---NEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKK 138
            G H KGPWT EED I+ D +        +WS IA ++ GRIGKQCRERWFNHLDP + K  WTPEED I+   Q +FGN W+ IAKLLPGR+EN+VKNRWNS+ARKK
Sbjct:   56 GLH-KGPWTEEEDGIVRDMVLMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAKLLPGRTENSVKNRWNSSARKK 161          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: W7TBR6_9STRA (Myb-related 3r-1-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBR6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.770e-37
Identity = 67/98 (68.37%), Postives = 82/98 (83.67%), Query Frame = 0
Query:   38 VKGPWTTEEDQIIIDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAA 135
            VKGPW  EED +I+ C+   +T+WSEIAER+ GR+GKQCRERW NHLDP++ KS+W+ EED+ L+ GQAR GN+W KIA LLPGRSEN+VKNRWNSAA
Sbjct:  183 VKGPWLEEEDAVILQCMRSGLTKWSEIAERIPGRLGKQCRERWLNHLDPSVSKSAWSLEEDKALLAGQARHGNAWAKIADLLPGRSENSVKNRWNSAA 280          
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Match: F0YEA4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEA4_AURAN)

HSP 1 Score: 144 bits (362), Expect = 3.370e-37
Identity = 68/119 (57.14%), Postives = 86/119 (72.27%), Query Frame = 0
Query:   26 KSTARCQAEGAHV------KGPWTTEEDQIIIDCINE-KMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEILVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARK 137
            +S  +C+    HV      KG +T +ED+II+  + E +   W +IA R+ GRIGKQCRERW NHLDP+LKK  WTPEED I+   Q R+GN+WTKIA+LLPGR+ENAVKNRWNSA R+
Sbjct:   54 RSPEQCRHRWEHVLSEGLVKGAFTEDEDEIIVRAMKEGRQLTWMQIAARIPGRIGKQCRERWTNHLDPSLKKGGWTPEEDSIMAEAQTRWGNAWTKIAELLPGRAENAVKNRWNSAFRR 172          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12041.1744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUQ8_9PHAE1.700e-31092.05MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2RZ51_9STRA3.320e-4478.22Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A5A8DBZ9_CAFRO1.290e-4271.29Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S2SVF3_9STRA5.550e-4274.00Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0Y4D5_AURAN2.360e-4172.16Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A2R5G768_9STRA1.730e-3972.28Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme... [more]
A0A7S4DB75_HETAK9.010e-3955.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2BQG7_9STRA2.650e-3762.62Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TBR6_9STRA2.770e-3768.37Myb-related 3r-1-like protein n=2 Tax=Monodopsidac... [more]
F0YEA4_AURAN3.370e-3757.14Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 89..137
e-value: 1.7E-15
score: 67.4
coord: 38..86
e-value: 3.8E-14
score: 63.0
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 39..84
e-value: 1.0E-13
score: 51.2
coord: 90..133
e-value: 1.2E-15
score: 57.4
NoneNo IPR availableGENE3D1.10.10.60coord: 91..158
e-value: 9.7E-19
score: 69.2
NoneNo IPR availableGENE3D1.10.10.60coord: 38..90
e-value: 8.5E-21
score: 75.6
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 36..201
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 36..201
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 85..139
score: 26.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 34..84
score: 16.161
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 37..72
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 64..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12041contigEcto-sp13_S_contig12041:1375..3980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12041.1744.1mRNA_Ecto-sp13_S_contig12041.1744.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12041 970..4883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12041.1744.1 ID=prot_Ecto-sp13_S_contig12041.1744.1|Name=mRNA_Ecto-sp13_S_contig12041.1744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=479bp
MEGSRNIDGVRQGGGGERQGDENKEKSTARCQAEGAHVKGPWTTEEDQII
IDCINEKMTRWSEIAERVEGRIGKQCRERWFNHLDPTLKKSSWTPEEDEI
LVHGQARFGNSWTKIAKLLPGRSENAVKNRWNSAARKKSTTSSQRRVSEW
RNVAMPSEAQTGGQMQYVMMPSAHHMNPQLTPSAAPMMESTIPIMDMPRS
PTCLLQYCPGFVPINPLHGLPVQQQWPSQQVPLLEPWRFPGSDGLQVLHA
RLSGRMAPAQQMYGHPFLLQPAFSMPPPVPLAAEGLSQQPFPVSMAAPSI
VAATGPDYSVRGCPSGTSGANDASIAPGAVTETASAEASAGTLQSPTQNG
QPQPLSETAMAFNADDELALANTLLSLSLEEQANVGAGFSGGRQVWGSRG
QLNEFDVLRGFGTYDVGLGSQHMTNNGKLDGSVSSNGVLPEGYHRKEATD
SSQLLQAPERPQQALEREVGDTSREGCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf