prot_Ecto-sp13_S_contig65991.17443.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65991.17443.1
Unique Nameprot_Ecto-sp13_S_contig65991.17443.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length44
Homology
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: D7FSR0_ECTSI (DNL-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR0_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.650e-19
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG
Sbjct:   50 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 87          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A6H5JD28_9PHAE (DNL-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD28_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.760e-18
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG
Sbjct:  215 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 252          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A835YZV4_9STRA (DNL zinc finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZV4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.960e-14
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    5 QVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            +VCETR AK F+KL+YE+GVVL RCPGC+N+HL+ADRLG
Sbjct:   88 KVCETRAAKGFSKLAYEQGVVLVRCPGCNNLHLVADRLG 126          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A2D4C279_PYTIN (DNL-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C279_PYTIN)

HSP 1 Score: 67.0 bits (162), Expect = 1.680e-13
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VC TR+AKT +K +Y KGVVLARCPGC N+HLIADRLG
Sbjct:    7 VCNTRSAKTISKHAYYKGVVLARCPGCENLHLIADRLG 44          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A7I8W5L9_9ANNE (DgyrCDS12153 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W5L9_9ANNE)

HSP 1 Score: 66.6 bits (161), Expect = 7.950e-13
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    5 QVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            +VCE RT +TF+K+SYEKGVV+ +CPGC+N HLIAD LG
Sbjct:   63 KVCEQRTTRTFSKISYEKGVVIIKCPGCNNNHLIADNLG 101          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A0P1A8C7_PLAHL (Zinc finger n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8C7_PLAHL)

HSP 1 Score: 67.4 bits (163), Expect = 8.070e-13
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VCETR+AKT +K +Y KGVVL RCPGC N+HLIADRLG
Sbjct:   89 VCETRSAKTISKHAYYKGVVLVRCPGCENLHLIADRLG 126          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A7S1X9S7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X9S7_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 8.370e-13
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VCETR AKT ++ SYEKGVVL RCPGC N+HLIADR G
Sbjct:  113 VCETRAAKTMSRQSYEKGVVLVRCPGCQNLHLIADRYG 150          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: H3GFR7_PHYRM (DNL-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFR7_PHYRM)

HSP 1 Score: 67.0 bits (162), Expect = 1.010e-12
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VCETR+AKT +K +Y KGVVL RCPGC N+HL+ADRLG
Sbjct:   83 VCETRSAKTISKHAYYKGVVLVRCPGCENLHLVADRLG 120          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: A0A2P4Y2G7_9STRA (DNL-type domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2G7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.070e-12
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    6 VCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            VCETR+AKT +K +Y KGVVL RCPGC N+HL+ADRLG
Sbjct:   86 VCETRSAKTISKHAYYKGVVLVRCPGCENLHLVADRLG 123          
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Match: UPI00098E3171 (DNL-type zinc finger protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E3171)

HSP 1 Score: 67.0 bits (162), Expect = 1.250e-12
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    5 QVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG 43
            +VCETR+ KT  + SYEKGVVLARC GC+N+HLIADRLG
Sbjct:   96 RVCETRSVKTVCRESYEKGVVLARCGGCNNVHLIADRLG 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65991.17443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSR0_ECTSI1.650e-19100.00DNL-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JD28_9PHAE2.760e-18100.00DNL-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YZV4_9STRA3.960e-1474.36DNL zinc finger-domain-containing protein n=1 Tax=... [more]
A0A2D4C279_PYTIN1.680e-1376.32DNL-type domain-containing protein n=1 Tax=Pythium... [more]
A0A7I8W5L9_9ANNE7.950e-1369.23DgyrCDS12153 n=1 Tax=Dimorphilus gyrociliatus TaxI... [more]
A0A0P1A8C7_PLAHL8.070e-1376.32Zinc finger n=1 Tax=Plasmopara halstedii TaxID=478... [more]
A0A7S1X9S7_9CHLO8.370e-1376.32Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
H3GFR7_PHYRM1.010e-1273.68DNL-type domain-containing protein n=1 Tax=Phytoph... [more]
A0A2P4Y2G7_9STRA1.070e-1273.68DNL-type domain-containing protein n=2 Tax=Phytoph... [more]
UPI00098E31711.250e-1274.36DNL-type zinc finger protein n=1 Tax=Asparagus off... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007853Zinc finger, DNL-typePFAMPF05180zf-DNLcoord: 5..43
e-value: 1.7E-17
score: 63.1
IPR007853Zinc finger, DNL-typePROSITEPS51501ZF_DNLcoord: 1..43
score: 12.148
IPR024158Mitochondrial import protein TIM15PANTHERPTHR20922UNCHARACTERIZEDcoord: 5..43
NoneNo IPR availablePANTHERPTHR20922:SF13DNL-TYPE ZINC FINGER PROTEINcoord: 5..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65991contigEcto-sp13_S_contig65991:65..196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65991.17443.1mRNA_Ecto-sp13_S_contig65991.17443.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65991 65..196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65991.17443.1 ID=prot_Ecto-sp13_S_contig65991.17443.1|Name=mRNA_Ecto-sp13_S_contig65991.17443.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=44bp
MLPNQVCETRTAKTFAKLSYEKGVVLARCPGCHNIHLIADRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007853Znf_DNL-typ
IPR024158Mt_import_TIM15